Cardiocondyla obscurior: 139106533
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Entry
139106533 CDS
T10704
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139106533 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cobs04990
]
139106533 (Snx27)
Membrane trafficking [BR:
cobs04131
]
Protein recycling
Others
Others
139106533 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
cobs04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
139106533 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
FERM_N
USP7_C2
PDZ_2
SNX17_FERM_C
TLC
RBD
AAA_22
VirE3
Sina_TRAF
Motif
Other DBs
NCBI-GeneID:
139106533
NCBI-ProteinID:
XP_070519490
LinkDB
All DBs
Position
LG01:complement(185702..195814)
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AA seq
550 aa
AA seq
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MVAAAVNGRPEYNMADCESEVHRLPAVNQDSSARNVAAAVTMVNNNARVLQHPAAAGPDK
DPVGQGPRCVTIYKTETGFGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPRGAAEKAG
VRKGDRILEVNNVNVEGATHKQVVDLIKSGGDVLTLTVISVTPQEAERLEPCEDVSYASV
DYSEKRSLPISVPDYHVRERKHERFVVFNVHMAGRHLCSRRYREFAALHMALKKEFIGFN
FPKLPGKWPFQLSEQQLDARRRGLEQYLEKVCAVRVIAESDAMQEFLTDRLEEDGDQGPA
VDLKVLLPDREVVTVTVPKAASVKDVYDAVCTRVGLDAETAKYFYLFEIVEYNFERKLQP
HEHPHTLYIQNYSTASATCLAIRRWLFNVNRPLSEQALTWIFWQTIDEVNRGHITAGERL
YQLKALQDASRKHEYLKLARELSGYGDIVFPHCACDSRKEGHVVPAVGMAAFKLHAAKED
GTLESQVVEFQWSTITRWEVDEDGMAFCFQYTRQDNRPPRWLKVFTPYYTFLSDCFDRIA
EEAKWDDPGE
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagccgccgtgaatgggcggccagagtacaacatggcggattgcgagtcagag
gttcaccgcttgccagccgtgaaccaggacagcagtgcgaggaacgtagccgccgccgtg
acaatggtgaacaacaacgcgcgcgtgctacagcatccggcggcggcgggcccggacaag
gatccggtcggtcaggggccgcgctgcgtcacgatctacaaaacggagacgggcttcggg
ttcaatgtacgcggccaggtcagcgagggtggacaattgcggagcatcaacggcgagctg
tacgcaccgctgcagcacgtcagcgctgtgctgccgcggggcgccgccgagaaggccggc
gttcgcaaaggcgaccgcattctggaagtgaacaacgtcaacgtcgaaggcgccactcac
aaacaggtggtggatctgattaagtccggcggcgacgttctcactctcacagttatttcc
gtgacgccgcaggaagcggaaaggctggaaccctgcgaagacgtgagctatgcatcggtg
gactacagcgagaaacgatctctacccatcagcgtgccggattatcacgttcgtgagaga
aagcacgagcgtttcgtagttttcaatgttcatatggctggcagacacttgtgctcacgc
cgataccgggagttcgcagcgctgcacatggcgttgaaaaaggaattcataggcttcaat
tttccgaagcttccgggaaaatggccgttccagttgagcgagcagcagcttgatgcaaga
agacgtggtttagagcagtatttggagaaggtttgtgcggtgcgcgtgatagcggaaagt
gatgccatgcaggagttcttgacggatcgattggaagaggacggtgatcagggtccagcg
gtcgatcttaaggttttgttgcccgatcgtgaggtcgtcaccgtcaccgttcccaaagcg
gcgtcagtaaaagacgtctacgatgcggtttgtactcgagtcggcctggacgcagaaact
gcgaagtacttttatctgttcgagatcgtagagtacaatttcgagagaaaattgcagcct
cacgagcatccgcacactttgtacattcagaattattcgaccgccagtgcgacgtgttta
gcaatcagaaggtggcttttcaatgtaaatagacctctgagtgaacaggcgctgacttgg
atattttggcagacgatcgacgaagtaaaccgtggtcacatcactgctggtgaacgatta
tatcaattaaaagctttacaagatgcgtcgagaaagcacgagtatctgaaattggcgaga
gagctcagcgggtacggtgacatcgtatttccgcattgcgcatgtgattcgcggaaggaa
ggccacgtagttccggcagtggggatggcagccttcaaattgcacgccgcgaaggaggac
ggtaccttggagtcacaggtggtcgaatttcaatggagcactatcactcggtgggaagtc
gacgaggacgggatggcgttctgcttccagtatacacgccaggacaaccgtccacctcgt
tggctcaaggtcttcactccttactacacgttcctctcggattgcttcgatcgaatagcc
gaggaagcgaaatgggacgatccaggagaatga
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