KEGG   Cardiocondyla obscurior: 139106547
Entry
139106547         CDS       T10704                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03018  RNA degradation
cobs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139106547
  09123 Folding, sorting and degradation
   03018 RNA degradation
    139106547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cobs03019]
    139106547
   03041 Spliceosome [BR:cobs03041]
    139106547
Messenger RNA biogenesis [BR:cobs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     139106547
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     139106547
Spliceosome [BR:cobs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    139106547
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 139106547
NCBI-ProteinID: XP_070519518
LinkDB
Position
LG11:complement(573996..575874)
AA seq 139 aa
MLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDIQMKSRGRGEMKGRGQNQRGRGSGRGTFGRGGRGPAPL
GRGGGTQVGNKSQNKPRPK
NT seq 420 nt   +upstreamnt  +downstreamnt
atgttacccctgactttgctgaaaacagcacaaaaccaccccatgctggtggagctaaaa
aacggcgaaacgtacaatggtcatttagttagttgcgataactggatgaacataaaccta
agagaggttatatgcacctcaagggatggtgacaaattttggaggatgccggaatgctat
ataagaggcagtacgataaagtatttgagaattcctgatgaagtaatcgacatggtgaag
gaggatatacagatgaaatcaaggggccgtggtgaaatgaagggtcgaggtcaaaatcag
aggggacgtggcagtggacgaggtaccttcggcaggggaggacgaggtcctgctccatta
ggtcgaggtggtggtacacaagttggaaataagtcacaaaataaaccaagacctaaatga

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