Cardiocondyla obscurior: 139106638
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Entry
139106638 CDS
T10704
Symbol
Shg
Name
(RefSeq) DE-cadherin isoform X1
KO
K27891
DE-cadherin
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cobs04515
]
139106638 (Shg)
Cell adhesion molecules [BR:
cobs04515
]
Cadherins
Cadherin related
139106638 (Shg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
CADH_Y-type_LIR
Laminin_G_2
Cadherin_FAT4_N
Laminin_G_1
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
EGF_Teneurin
EGF_2
DUF443
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
139106638
NCBI-ProteinID:
XP_070519668
LinkDB
All DBs
Position
LG11:complement(1981458..2115396)
Genome browser
AA seq
1505 aa
AA seq
DB search
MLETHAARRPGARPRVPPAPSPAIVASVLMLLLGTLASATRLRHSRHLDVRSQFPAEGVL
PFDENHNYKPVFTNCSNYAPVVKEEEMPGIRVIQVQAEDRDPPEAGGTITYRLVTGPDER
LKFRIDNKTGLIKTTQILDRDEPAREKEAYLTVLATDNGVPQLDDVCTFKVTIEDVNDNG
PVFDKVVFRGNAWKAYRESVPQDLAIGREVMRVSATDIDDGDNSIVRYSLSSKRPDDAAY
FRIDRDTGIIFLNKTIDRKPNYKFSLTATATDLGENPQSGVIDLDIRVVESHKKAPTFVS
RSPMGPIKLREDFRDYDTAIVRLQAISNINSSSIVNNSYLVFDMVSGGTEQTNKFNTFRL
ESNNDVANIHLAQLLDYERNTQYSLIVQVQNKYHLAAEAVVDIEILDVNDNIPIFREIKK
GSVFENEPPGVPVMQVKAIDADGTSANNQVSYELDNFRDLFAIDPKTGNITTLVTFDREV
EDTYTVKVIAKDNSPSAVSKTGEPNKGSHVFEIEIADKNDNPPRFTRKVYTHNSVYENAN
INAPVTQVEAIDSDTASPVTYSIISGNTDDSFYIEATGKIRVKKPLDYEKITKYNLTVRA
YDGVFNDTAQVEIFVENVNDNPPVFEDFNKNPTIEEEKLVEGCITTVVAYDPDIEDRNAD
QHIVYFIVSEDQQPIIGIDKSGCLRLKKPLDRDPPKGYSTWFITVMAKDEDGLSTYLRES
MQINITLIDINDNAPFLDMPYPIIWGENKPPGMITELKARDYDSQENGPPFKFKIDFTAD
DEIKSKFDIRGNNLYARVEFDRERKKSYDIPIAITDSGTPPMTGISMLTVIIGDENDNPM
QEGASSIFVYNYKGESPDTEIGRVYVNDPDDWDLPDKSFDWASHHDGFHLDTNTGMITLL
SGTSNDTFVLKFIVTEKGQKIASHQVHAYVNVTIKELPEEAVDKSGSVRFFGITAEQFVE
PDESGVSKKEIFQEKLATMLNTSIENVDVFTVLHSPHHNNRSLLDVRFSAHGSPYYAPEK
LNTIIAQHSKEIEREMKADILLMNIDECLFERTHCNNSCRNFLNASTVPYTVYTNTSSFV
GVRAVVDPQCTCHVAEPIVCLNGGTPLKERCECPPGFEGPRCEILGIGFHGDGWAVMPPP
GQACDDSHLGLEITPHVDNGLVFYFGPMTYNPKLGHQDFMSLELQHGFAVLYVDYGTGTV
RLDQKQIKLTDGKSHRIDVYWRKTSIEMIVDRCGISACMSLTAPQGTNEFLNVNSPMQVG
GTLSNLAHLASSLKWDHKPTEKGFVGCIRNMTFNGNTYNLGMPALSKNADPGCGHDMAKA
ISFGIDTNFIVAILVCVLILLILLVAVVVHRRKTDDLYKDMDDIRENIINYEDEGGGETD
AGYDLNVLRAIYDAPPLDSKIAPVGLQGRGADEVPDICGFLDSKKESCDKDPDTNPFDDV
RHYAYEGEGNSEGDLSSLASCTDDGDLNFNYLSNFGPRFRKLADMYGEDPSDEESDGVGE
RESWC
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaacgcacgccgcgcggcggcccggggcgaggccccgcgtccctcccgcgccg
tcgcccgccatcgtcgccagcgtgctgatgctgctgcttggaactctcgcttctgcgacg
agattgaggcactcgaggcacctggacgtgagatcgcagttcccggccgagggtgtatta
ccgttcgatgaaaatcacaactacaagccggtgttcaccaactgctcgaattacgcgccg
gtggtgaaagaggaggaaatgccaggaataagggtgatccaggtgcaagctgaggacagg
gacccaccggaggcgggaggcactatcacgtaccgactggtgaccggtcctgacgagagg
ttgaagttcaggatcgacaataagacaggtctcatcaagacgacccagatactcgacagg
gacgagcccgcccgcgaaaaggaagcttatctcacggtgctcgctaccgacaacggggta
ccgcagctggatgacgtatgcacatttaaagtcaccatcgaagacgtcaatgacaatggt
cccgtcttcgacaaagtggtcttccgtggaaacgcgtggaaggcatacagggaatctgtg
ccacaagatttggcaataggccgcgaggtcatgcgggtctccgccaccgacatcgacgac
ggcgacaactcgatcgtgcgctacagcctctcgtctaagaggccggatgatgctgcatac
tttcggatcgaccgcgacaccggcatcatattcctcaacaaaactatagacagaaagccg
aattacaagttcagcctgacggccaccgctactgatcttggagagaacccccagagtggt
gtcattgatcttgacatacgagttgtggagtcgcacaagaaggcgccgactttcgtgtcg
aggtcgccgatgggtccgatcaaactccgggaggactttcgagattacgacaccgctatt
gttcgcttacaagcgatctcaaacatcaactccagcagcatcgtgaacaactcgtatctg
gtgttcgatatggtgtctggcggaacggagcagactaacaagttcaacactttcagattg
gagtcgaataatgacgtggcgaatatccacctggcccagctccttgattacgagcgcaac
acgcaatactcgttaatagtccaagtacagaacaagtatcatttggccgctgaggcggtc
gtggatatcgaaatcctggacgtgaacgacaacattccgatcttccgtgaaattaaaaag
ggaagcgtgtttgaaaacgagccaccgggagttcccgtaatgcaagtgaaggcgatcgac
gccgatggaacttccgccaacaatcaggtcagttacgagttggacaacttcagagatctt
ttcgccatcgacccgaaaactggtaatattacgacgttagtgacgttcgacagagaggtt
gaagatacctacaccgtgaaagtaatagcgaaggacaattcgccaagtgccgtttcgaaa
actggcgagcccaataaaggatcgcacgtgtttgaaatcgagattgccgataagaacgac
aatccgcctcgctttacccggaaggtgtacacgcacaattcggtttatgaaaacgcgaac
atcaacgcgcccgtgacccaagtcgaagccatcgattctgatacagcgagccctgtcaca
tacagcatcatatctggcaataccgatgacagcttttacatcgaagctacaggaaaaatt
cgcgtgaagaagccgcttgattacgaaaagatcacaaaatacaacttgactgtaagagcg
tacgatggtgtatttaatgatacagcccaggtcgagatttttgttgaaaacgttaatgac
aacccaccggtcttcgaagattttaataaaaatccgacgatagaggaagaaaaacttgta
gagggatgtatcaccaccgtggtggcttacgatcccgatatagaagacaggaatgccgac
cagcatattgtttattttatagtctctgaagaccagcaacctataataggaatcgacaaa
tctggctgtttgagattgaaaaagccgttagatcgtgaccctcctaagggttactctacg
tggtttattaccgtgatggcgaaagacgaggatggtttgtctacgtatcttcgagaatca
atgcaaattaatatcactcttatagatataaatgacaatgcgccattcctcgatatgcct
tatccgataatttggggcgaaaataaaccgcccggtatgataaccgagttgaaagcacga
gattacgactctcaggaaaatggcccgccatttaagtttaagatagatttcaccgcggat
gatgaaattaaatctaagtttgacatacgcggaaataacttgtatgcccgagtggaattc
gacagagagagaaagaaaagttatgatataccgatcgcaatcacggacagcggtacgcca
cccatgacgggcatttcgatgctcactgtgatcataggcgacgaaaatgacaatccgatg
caggagggcgcgagttctatattcgtctataattataaaggagagtctcccgatacggaa
atcggacgtgtttacgttaatgatcctgatgactgggatctgccagacaaatctttcgac
tgggcctctcatcacgacggttttcatcttgatacgaataccggcatgatcactttatta
tcaggcacgtcaaacgacacttttgtattgaaatttattgttaccgagaaaggccaaaaa
attgcatcacatcaagtgcacgcctacgtcaacgtcactattaaagaacttcctgaggaa
gccgtcgacaaatccggctccgtacgattttttggtataacggcagagcaatttgttgaa
cctgacgaatctggtgtcagtaaaaaggagatattccaagaaaaactagcgactatgttg
aatacgtcaatcgagaacgtcgatgtatttactgtacttcattcacctcatcacaacaac
agaagcctgttggatgttcgattttcggcacatggcagtccgtattatgctcccgaaaaa
ctgaacacgattatagcacagcattcgaaagaaattgaacgtgagatgaaagcggatatc
ttgttgatgaacattgacgagtgcctgttcgaaagaacccattgcaacaattcgtgccgc
aatttcctgaatgctagcaccgttccgtacaccgtctacaccaatacgagctcgtttgtt
ggtgttagggcagtcgtggatccgcaatgcacttgccatgttgcggaacctattgtctgc
ttgaatggtggcacgcctctaaaagagcgatgcgagtgtccgcctggtttcgaagggccg
agatgcgagatactgggcatcggatttcatggagacggctgggccgtaatgccaccgccc
ggtcaagcttgtgacgactcacatctaggattggagataacgccacacgtggacaatggt
cttgtattttacttcggcccgatgacttacaatccgaagcttggacatcaggactttatg
tcccttgaacttcagcacggcttcgctgttttgtatgtcgactatggaacaggaactgta
agactagatcaaaaacaaatcaaattaacggacggcaagagccacagaatagacgtttat
tggagaaaaacctcgatagagatgatagtcgatagatgcggcatatctgcttgcatgagt
ctcacagcaccgcagggtaccaacgaatttttaaacgttaacagtccgatgcaagtaggc
ggtacgttgagtaatttagcgcatttagcatcgagcttaaaatgggatcataagccaacg
gaaaaaggatttgttggctgcatacgcaatatgacatttaatggaaatacatacaattta
ggtatgccagcgttatctaaaaatgcagatcctggctgtggtcatgacatggcgaaggcg
atttctttcggaattgacacgaattttatagtagctattttggtttgcgtattaatattg
ttaatattgcttgtggcagtagttgtgcatagaagaaagaccgatgacctgtataaagat
atggacgatatcagagaaaatattattaattatgaagacgaaggaggcggtgaaaccgat
gcaggttacgacttaaatgtcttaagagccatttatgatgcaccgcctcttgattcaaaa
atagctccagttggtctacagggtagaggagccgatgaagttccagatatttgtggcttt
ttagatagtaaaaaagaaagctgcgataaagaccccgatacaaatccgtttgatgacgtg
agacattacgcttacgaaggagaaggaaactcagaaggcgatttgtcgtcattagcttca
tgcactgatgatggagatctcaactttaattatctatctaatttcggaccaagatttaga
aaattggcagatatgtatggagaagatccaagtgatgaagaaagtgacggagtcggtgaa
cgagaaagttggtgttga
DBGET
integrated database retrieval system
