Cardiocondyla obscurior: 139106641
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Entry
139106641 CDS
T10704
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cobs03037
]
139106641
Cilium and associated proteins [BR:
cobs03037
]
Primary cilia and associated proteins
Dynein and associated proteins
139106641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
139106641
NCBI-ProteinID:
XP_070519675
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Position
LG11:366555..371786
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AA seq
983 aa
AA seq
DB search
MSDKGAVKKTRSKNEIKTQVKSKVKTLSSDEGNVEMSKKPDSNLLRKSQMVEHRKDENRM
PKLLQNISTRAQSSKSTTKPFTESSQLKTVKQVSSTRTKSSQLNTSSSQSLTKRSTISKT
KSENATKLNDDNTVKKRKSREVGYSEKRGQSTIYMPKSTTSKPNVKSNETVVNRTPKDKE
KLQDFPAPDRVKPQMPSKERRKSRTLSPSEVRMLHSVVKKSDVMDKENQKKSVAEKSQMQ
QVDSDEADYDYEDDFEDYESDFQECTDSDTPSISEKSDSSGRDSQLKPIQLKIQEKKNTE
HTKVEEERMLDSGHYDLAEAKKRAARVESALLTQSNTLSLTELKESVSKTFSSDDRPAEN
KSLPSSTDEGFEDSRSGDFTRSSPLSQIPLIDFRKPKKTRHKENSQKLRSRGEELLEMIK
LDFMEWSILECNPVPYDEFIRNYGKLNTQQAFTQTGDDNMDVEIQTDEVSHKNKWTQFPV
TCRENLRDKRDVYLFKMEQIGVGSDLDETDDINFLSRPSYDILRLNNFLNRAGAVILSLL
EEKEHGGTVFQSDVDELSFSDGFVKLSVDTVTFLATRPVKIIHYSSVLNKVLLTIHASAE
EEIETISKQDYITDCCIGCVWNISEPSMPKKLFYSQCSITACCFHLTNCNTVFAGLEDGS
LSLWDLKEDEMWHQKVTDKANELDWVIRTPTYTTTAELDAHTSQVISIRVLSKTETAFAK
EKINKFVPIQICSLDEDGCLIIWSIVHNMGINIDDLGLSHWGDIRLVKNQKTFLTRKNAE
IMNTFIDMHVDSANKNNIYVATNSTDVLHATTIGHRTNPLTYKPAEISECGNLACIDVCP
FGQSFFWVGCDDGTIRLHYLNVERPIIQLKNEQYTNGIKALQWSKTKPLTIYTLDNNSRI
YVWDLSQSDICPVHILSTKKWGKISSMQLSPCEINQDMTNQYLALGTESGNVEVHKLKKE
FYYSKKEEVLQELNLFSRYVSVS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaggagcagtcaagaaaactagatccaaaaatgaaatcaagacacaggtg
aaatctaaagtaaaaacgttgtctagcgacgaaggcaatgtggaaatgtccaaaaaacca
gattctaatttgttaagaaagtcccaaatggttgagcacagaaaagatgaaaacagaatg
cctaaattattacagaatatctcaacaagagcacaatcgtctaaaagtaccaccaaacca
ttcactgaatcttctcaacttaaaactgttaagcaagtatcatcaacccgaacaaaatct
agtcagcttaatacttcttctagtcagtcattaacaaagaggagtacaatatctaagaca
aaatctgaaaatgctactaaattaaacgacgacaatacggtaaagaagagaaaatccaga
gaagtggggtattcagagaaaagaggccagagtacaatatacatgccaaaatcaactacg
agcaagcctaacgttaagtctaatgaaactgttgtaaatcggacgccgaaagataaggaa
aaattgcaagattttcctgcccctgaccgagttaagccacaaatgccatccaaagaacgt
aggaaatcaaggacattgagtccaagcgaagtaaggatgttgcacagcgttgtaaaaaaa
tcagatgtcatggacaaggaaaatcaaaagaaaagcgtggcggagaaatctcaaatgcaa
caagtagactcggatgaggcagattacgattacgaagacgattttgaggattacgagtcg
gactttcaggagtgcactgacagcgatactccttcaattagcgagaaatcggatagcagt
ggacgtgattcccaattaaaacctattcaacttaaaatccaagagaagaaaaatacagaa
cacacaaaagtcgaagaggaacgtatgctcgactcgggacattacgatctcgcagaagcg
aaaaaacgggcggcgcgagtagagtctgctctcttaacgcaatcaaacacattgtcgtta
actgaattaaaagagtctgttagcaaaacgtttagcagcgacgatagaccagcggaaaat
aaatctctgccttcatccactgatgaaggcttcgaggatagccgttctggagactttact
aggtcttcgccgctatctcaaatacctcttatcgactttcgtaaaccaaaaaagactcga
cataaagagaactcgcaaaaacttcgaagcagaggcgaagaactgttggaaatgataaaa
cttgacttcatggagtggtcaatattggaatgcaaccctgtgccttacgacgaatttata
agaaattatggaaagttaaatacgcaacaagcgtttactcaaaccggtgacgataatatg
gacgttgagatacaaacggacgaggtgtctcacaaaaataaatggacacaattcccagtt
acctgtagagaaaacttacgtgacaaacgagatgtatatttatttaaaatggaacaaatc
ggcgtcgggagtgatttggacgaaacggacgatatcaattttttatcgcgtccatcgtac
gacatattgcggttaaacaattttctcaaccgagcgggtgcggttatattgtcgctgctt
gaagaaaaagaacacggcgggaccgtgtttcaaagtgacgtagacgagctatcgttcagc
gatggcttcgtgaagctctctgtagatacagtaacgttcttagccaccaggccggttaag
atcatacattattcgagtgtcttaaataaggttttgcttactatacatgcttcagcagaa
gaggaaatagaaaccataagtaagcaggattatatcaccgactgctgcatcggatgtgtt
tggaatatttccgagccctcaatgccaaaaaagttattttattcacagtgttctattacc
gcctgttgtttccatttaacgaactgcaacacagtattcgccggactcgaggacggatca
ctaagtctctgggatctaaaggaagacgaaatgtggcatcaaaaagttacggataaagcg
aatgaattagattgggtaattagaacgcctacttacacgacaactgcggaattagatgcg
catacatcacaagttatttcgatacgcgtgttatctaaaactgagactgctttcgctaag
gaaaaaataaacaagtttgtccccattcagatatgcagtttagatgaggatggttgtctt
ataatatggagtattgtacataacatgggtataaatatcgacgatctgggactttctcac
tggggcgacataagactcgtaaagaatcaaaaaacatttttaacaaggaaaaatgcagaa
ataatgaatacatttatcgatatgcatgtggatagtgcaaataaaaataacatttatgtc
gcaactaacagtactgatgttttgcatgcaactactatcggtcatagaactaatccatta
acctataaacctgctgaaataagtgaatgcggtaatttagcttgcattgacgtttgcccc
tttggtcaatcctttttctgggttggttgtgatgacggaacgattcggcttcattactta
aatgtggaaagaccgattatacaattgaaaaatgaacaatatacaaatggaattaaagct
ttgcaatggtcgaaaaccaaaccgttaacgatatatactttagacaataattctcggatc
tacgtgtgggatttgagccagagtgatatttgtcctgtgcatatattatctacgaaaaag
tggggaaagataagtagtatgcaactgtctccttgcgaaataaatcaagatatgacaaat
cagtatttggctttaggcacggaatctggtaatgtggaggtacacaagttgaaaaaagaa
ttttattattcaaagaaagaggaagttttacaagaactgaacctattttcgcgatatgtt
tcggtatcgtaa
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