Cardiocondyla obscurior: 139107046
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Entry
139107046 CDS
T10704
Symbol
Polybromo
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139107046 (Polybromo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139107046 (Polybromo)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139107046 (Polybromo)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139107046 (Polybromo)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
139107046 (Polybromo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
139107046
NCBI-ProteinID:
XP_070520375
LinkDB
All DBs
Position
LG12:complement(1316916..1327511)
Genome browser
AA seq
1652 aa
AA seq
DB search
MNKRRRTSSVASRGTEDDGDDIPPEPTKRRKKLDPSDLCQQLYDILRNQKKEDGSLLCDA
FIRVPKRRQEPGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAADIQLMVNNAKAFYMRTS
SEYKDATELWELCVNTKNRIMEEYEDSEPKGKLILKVGRLARKITTRQDDAEDTSESSTN
LDEETMQLFEDLFAAVMTATDPTDNNRPLHIMFQLKPSKKLYPEYYDVIETPIDLKTIAR
KIQEGAYSSLGDMEKDLMLMCRNACQFNEPGSQIYKDAKLLKKIITAAARRQDGGFGNTF
KIATTAPSTRSKRGSRTMAQSLISQTAALPDEDDESDDEEEEPAETEEADNPQWQLFQTI
RTAPNNQGVRMSEYFWKLPSKRLYPDYYKTIKNPISLLQIRTKIKKGEYGTVSEVAGDMN
IMFENAKKYNMHTSRLYKCAVKLQKIMQEKVQELLEFDQDSDSDSESENSLQQPKLIKRA
SNLLTRGKYKDNIPLKKRLHTLVKCVMEYVCEDGRQPMLMFMEKPSKKLYPDYYQVIAEP
IDMLAIEANIKAEKYQNENELIQDFKLMFSNCRQYNEEGSLIYEDANTLEKVLMDKVKEL
GPLPDNPRSKSTASTPTRNVGRPKKVVPLHLQKLRTLYDTIKDYHDAKGRQLSLIFMKLP
NKNEYPDYYEVIKQPIHMEKIASTLKNNGYDNLDELVSDFILMFDNACKYNEPDSQIYKD
ALILQRLVLQSKLQLSEDEESVPDVSAAIQEILATIFTALYNHQDEEGRCYSDSMAELPE
HDIVDGKKVRGLSLDLIKRRLDRGVYKRLDRFQEDVFTCLERARRLSRTDSQPFEDSVEL
QAFFLRTRDDVTRNGELLQSPALNYTLLELSTQVAELKRIKQQQELNLPNEEESCDGNET
KDSESNTETNNTDNGGSMSFNQEVYRAGDFTYIEPTERGMEYSVVLIERLWTNADGQQML
YGNLFYRPSETYHVASRKFLDKELFKSDAHVAVPLAKVAGRCCVLSVKDYFRMQPEGFQE
KDVYVCESRYSTKARAFKKIKVWNFDPDHLTLIPREKPLEPKRVISVYKERLEKHKEEIA
ELEEGEKPMEKEKPLPFTLQNIIVFNPEDTENTYYEQYSACVGAVKTGDFVYVATDGGRQ
QIAQVDSIWSTKDGKCYFKGPWLLMPTEVPHTPTKLFYKQELFLSTVDGTHPIVAIVGKC
AVLDYGEYICSRPTEIPEDDVYICESFYDESKNLIKKFGQESLKKFNHTSAVTEDEIYFF
RRPINPAKVSSDVAQTQSQVKSVTPSSAQFEMEASPLLPKLEPDVLSMGVGLGVGVGVGV
GEDSMDAGGPPSVGSTEAQPVLSNTQTPVSTKKKTAGKKLVTGYILYSSKMRTQITQNNP
ESSFGEISRIVGNEWRKLPAGEKQAWEERAIKMNEDSGQLKGTASVGTNATQDVVYECCW
DNCDWQFEDTNDCIDHCIAEQNGHVQTSFANAPSDVEYQCQWRGCGRTKKSVPPFPSVQR
LARHVKEVHILKSHGRIIPPSERSRNYMPSKGPTVLPPMETETSAAATQTSSLPTAKQPE
PMFVAVPPRPSRVLHSDAYLRYIEGLNVENRYISNWDKQMNASPDNTQIPDVTKLPAEWL
GNGVGNHGNVVNALWTLRNMMMRDVLAINKTL
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcggcgtagaacatcgtcggtggcgagccgcggtaccgaggacgacggcgac
gatatcccgcccgaaccgacgaaaagaaggaaaaaactggaccctagcgatttgtgccaa
caactgtacgatatactccgcaatcagaagaaggaagatggatctttgttgtgcgatgca
tttatacgcgtgccgaaacgccggcaggaaccaggatactacgaagtagtctccaatccc
atagatctgttaaaagtacagcaaaagctgaaaactgacgagtatcgagatatggatgat
ctcgctgctgatattcaacttatggtgaacaacgccaaagctttctacatgcgtacctcc
tctgaatacaaagacgcgactgaactgtgggaactatgtgtaaataccaaaaatcgtatt
atggaagagtatgaggattcagaacctaaaggaaaacttattttaaaagttggcagattg
gcgcgtaaaataacgacgcgacaagatgatgcagaagatacttcagaaagttctacgaat
ctcgacgaagaaactatgcagttattcgaagatttatttgccgcggttatgacagcaact
gatcccactgacaataaccgacctcttcatattatgtttcaactcaaaccgtctaaaaaa
ctttatcccgaatattatgatgttatcgagacaccaatcgatttaaaaactattgcgaga
aaaattcaagagggtgcatacagctcactaggtgatatggaaaaagatttaatgcttatg
tgccgcaacgcttgtcaatttaacgaacctggttcacaaatttataaagatgctaagctt
ttaaaaaagataattaccgcagctgcgagaagacaagacggcggattcggcaataccttt
aaaatcgctacaaccgcaccctcaacaagaagcaaaagaggcagtcgtactatggcacaa
tcgttaatctcgcaaactgcagcattacctgatgaagatgacgaaagcgatgacgaagaa
gaagaacctgccgaaaccgaggaagctgataatccccaatggcaattatttcaaaccatt
cgaactgctcctaataatcaaggtgtaaggatgagcgaatatttttggaaacttccatca
aagagattatatcctgattactataagacgattaagaatcctatatccttattacaaata
cgtacaaagatcaagaaaggcgaatacggcactgttagtgaagtagctggagatatgaat
atcatgtttgaaaatgctaagaaatataacatgcacacttctcgtctgtacaagtgtgct
gttaaattgcaaaaaataatgcaggagaaagtacaagaattgttggaattcgatcaggat
tctgattcggacagtgaatctgagaacagtttacagcaacctaaattgattaaacgtgcg
tcgaatttattgacacgtggaaaatacaaagataatataccattgaagaaaagattacac
acattagtcaaatgtgttatggaatacgtttgcgaagatggtcggcaacccatgttaatg
tttatggagaaaccttccaaaaaattatatccagattattatcaagtgatagcagagccc
atagatatgctggcaattgaagctaatattaaagcggagaaatatcaaaatgaaaacgaa
ttaatacaggattttaagttgatgtttagtaattgtcgtcaatataacgaagaaggttcg
ttgatatacgaagacgctaatacattggaaaaagttttgatggataaggtaaaagaatta
ggacctttgccagataatcctagatcaaaatctaccgcatcaaccccaactagaaacgtc
gggcgaccgaaaaaagtagtgccacttcatttgcaaaaattacgaaccctatacgatact
ataaaagactaccacgatgcaaagggaagacagttatctttaattttcatgaaattacca
aataaaaatgaatatccagattattatgaggtgataaagcagcctatacacatggaaaaa
atagcctcaactttaaagaataatggatatgataatttggacgagttggtgtccgatttt
atattaatgtttgacaacgcttgcaaatataacgagccggactcacaaatatacaaggac
gccttgatacttcaaagattagtgctgcaaagtaagctgcaattgagcgaggatgaggaa
agtgtacctgacgtatcagcagctatccaagagattctggcaacaatatttactgcactt
tacaatcaccaggatgaggaaggacgatgttactccgattccatggcagagttgccggag
cacgatattgttgatggcaaaaaagtgcgagggttatcattggatttgattaaaagaaga
ctagatcgaggagtttacaaaaggctagatcgattccaagaagatgtttttacttgcttg
gagagagcgcggagattgtcgcgtacggactctcaacctttcgaagatagcgtggagctg
caggcgtttttcttgcgtactcgcgatgatgtaactcgcaatggagaattattacaatcg
cccgccttaaactacactcttttagagctgtctactcaggtagcagaacttaaaagaata
aaacaacaacaagaattgaatttacctaatgaagaagaaagttgtgatggcaatgagaca
aaggactccgaatcgaatacagaaacaaataatactgataatggaggttctatgagtttt
aaccaagaagtatatagagccggtgactttacatacatcgaacctaccgagagaggcatg
gaatacagcgtggttcttatagaaaggctctggaccaatgcggatggtcaacagatgttg
tatgggaatttattttatagacccagcgaaacgtatcatgtagcgtcgagaaaatttctt
gataaggaattgtttaaaagcgatgctcatgtggccgtacctttagcgaaagtagccggc
agatgttgtgttctaagtgtaaaagattattttcgaatgcaacctgaagggtttcaagaa
aaggacgtttatgtatgcgaatcacgttattctacaaaggcacgagcgtttaagaagatc
aaggtctggaatttcgatcccgatcacttgacactgattcctagagaaaagccattagaa
ccgaaacgagtaatatcggtgtataaagaacgactagaaaaacataaagaagaaattgcc
gagttagaggagggagaaaaaccaatggaaaaggaaaaacctttaccatttactttgcag
aatataatagtgtttaatccggaggacacagagaacacatactatgagcagtatagtgca
tgtgtgggtgctgtaaaaaccggcgatttcgtttatgttgctacagacggaggtagacag
caaatagcgcaagtcgattctatatggtcaaccaaagacggcaagtgttatttcaaaggc
ccatggttattgatgcctacagaagtgccacatacgcctacgaaattattttataagcaa
gaattgtttttatctactgtagatggtactcatcctattgtagctattgttggaaagtgt
gccgtccttgattatggggaatatatatgtagtagaccgacagaaataccagaggacgat
gtgtatatttgcgaatcgttttacgacgaaagtaagaacttgataaaaaagtttggccaa
gaaagtttaaagaagttcaaccatacgtcagcggtaaccgaagacgaaatctatttcttc
cgaaggcctatcaatcctgcaaaagtttcgagcgacgtggctcagacgcaaagtcaagtc
aagtccgtcacgcccagctcggctcagtttgaaatggaagcgtcaccattgttaccgaag
ctggaaccagatgtactaagcatgggggtaggattaggagtgggagtgggagtaggagtt
ggggaagacagcatggatgctggtggtccaccatccgttggatctacggaagctcaaccg
gtgctctccaatactcagacacctgtgtcgactaagaagaaaactgcgggtaagaaatta
gttacgggctatattttatattcgagtaaaatgcgaacccagattacacaaaacaatcct
gaatcgtccttcggagagattagcagaattgttggcaatgagtggaggaaattaccggca
ggagagaagcaagcatgggaagagcgggcgatcaagatgaacgaggacagcggccagttg
aagggcacagcatcagtgggtacgaatgccacgcaggatgtcgtctacgaatgctgctgg
gataattgcgactggcagttcgaagacacgaacgattgcatcgatcactgcatcgcggaa
caaaacggtcacgtacaaacatcatttgcaaatgctcctagtgacgtagagtatcagtgc
caatggcgtggctgtggccgaacgaagaaatctgtcccaccttttccaagcgtgcagaga
ctcgcaagacacgttaaagaggtgcatattctcaaatcgcatggacgcataataccacct
tccgaaagaagcaggaattacatgccttcgaaaggacctacggtactaccaccgatggag
acagaaacttcagcagccgcaactcaaacgagcagcttgcccaccgctaaacagccggag
ccgatgtttgttgcggtgccaccgagaccaagtcgcgtattacattcggacgcctatttg
aggtacatcgaaggtctaaatgtagagaatcgctacatatcaaattgggataagcaaatg
aacgccagtccggataacacgcagatacccgatgtaacaaagctgcctgccgagtggcta
ggaaacggcgttggaaaccacggaaatgtggtaaacgccttgtggacactcagaaacatg
atgatgcgggatgtgttagccatcaataaaactttatag
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integrated database retrieval system