Cardiocondyla obscurior: 139107226
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Entry
139107226 CDS
T10704
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04140
Autophagy - animal
cobs04148
Efferocytosis
Brite
Membrane trafficking [BR:
cobs04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
139107226
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GFIT
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NCBI-GeneID:
139107226
NCBI-ProteinID:
XP_070520754
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Position
LG12:4877071..4882406
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AA seq
846 aa
AA seq
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MESTSNKDEQNSREDSDSSEIDEKEPRLKYVRIRNDLEHILQNDAASCIAVHPKFLCLGS
HWGMIHLLDHQGNNIKSKTLQAHTVAVNQISIDYNGDFIASCSDDGKVFIYGLYSAENNQ
NMSMGRLVKSIAIDPNDKSGNDRRFITGDDKLVLYEKTFLARMKQTVLCEAEGGVKSVSW
SGRFVAWASDTGVRVYDLDARCSLGLIKWSHTTGASPEHYRCNLQWSDDKTLLIGWVDIV
RICHIRKRTVQEMVNRDLPEFVVDPVSTFQVDFYISGIAPLKNQLVLLGCVKQLDEDGKN
QRPTLHVVEPKCQDFSIICANSLTLRGYKEYSCNDYHLDCLKEENRFFIVSPKDIVVASL
YDTDDRIEWLLSHGKFEQALEAVIANNGKDCKKHTVLDVGRIYLDHLLACEKYDEAGKLC
LKVLGRSKKLWEEEVYKFARVHQLRSISSYLPRGDVILDPLIYEMVLYEYLKMDPDGFLR
LVKEWSPNLYTVAAVVNGVLAHLLVHNQRQNVLLEALAILYIHDGKYDKALAMYLKLRHK
DVFHLIQKYQLYNAVYDMIEGLMDLDTERAIQFFLEKDRVPTDIVVQKLQHNHRYLYLYL
DALDKKDTKDSKGKYHGLLVRLYADYSRDKLLPLLRRSDNYPIQQALDICTQRQFYPEMV
YLLGRIGNTSEALALMTRELNDMESAIAFCQEHDDEELWNDLINYSLDKPAAITFLLQKI
GTYVDPRLMVQMIEPTLQIPGLKKALVKMMCDYNLQVSVQEGCNKILSNDYFNLHERLVH
CHQKGILINDDQMCGACHRKIIIREPRNMIVFYCKHCFHEDCLPNFDLIENCVICNSQRE
MIPSRK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaatctacatctaataaagatgaacagaatagtcgggaagattcagattcttcagaa
atagatgaaaaagaacctagattaaaatatgtaaggatacgcaatgatctagaacatatt
ttgcaaaatgatgcagctagctgtattgctgtacatccaaagttcctctgtctgggatcg
cattggggaatgatccatctgttagatcatcaaggaaacaacataaaatccaaaacatta
caagcacacacagttgcagtcaaccaaatatctatagattataatggagattttattgcc
tcttgcagcgatgatggaaaggtttttatttatggattgtacagtgcagaaaataatcag
aatatgagtatgggtagactagtcaagagtatagcaattgatccaaatgataaaagtggc
aatgatagaagatttattacaggcgatgacaagttagttctttacgaaaagacttttctg
gctaggatgaagcaaacagtactttgcgaagcagaaggcggagtcaaatctgtttcgtgg
tccggtcggtttgttgcatgggcatctgacactggtgtgagagtttacgatcttgatgct
agatgttcattaggactcattaaatggtctcataccacaggggcatcaccagagcattac
cgatgcaatttgcaatggtcagacgacaaaacattattaattggctgggtggacattgtg
cgtatctgccatattaggaaacgtaccgtgcaagaaatggtcaatcgagatttacccgaa
ttcgtagtcgatccagtgtcaacgtttcaagtagatttttatatatctggtatagcacca
ttgaaaaatcagttagtattattgggatgcgtgaagcaattggacgaagatggaaaaaat
caacgtccaactctacacgtggttgaacctaaatgtcaggatttttcaataatttgcgca
aattcgcttactctacggggttataaagaatatagttgcaacgattaccatttagattgt
ttaaaggaggaaaatagattttttatcgtaagtccaaaggatattgtagtagccagttta
tatgatacggacgacagaattgaatggctgttgagtcatggaaaatttgagcaagctttg
gaagctgtaatagcaaacaacggcaaagattgcaaaaagcatactgtattagatgtaggg
cgtatttatttggatcacttattagcatgtgaaaaatatgacgaagctggaaaactttgc
cttaaagttttaggacggagtaaaaaattatgggaggaagaggtttacaaattcgccaga
gtgcatcagcttcgttcgatctcgtcatacttgccgcggggtgacgttattctcgatccc
ttaatttacgaaatggtgttgtatgaatatttaaaaatggaccccgacggttttttgcga
ctggtcaaagaatggtctccgaatttgtacacagtagctgcggtagtcaatggcgtacta
gcgcatttactggtgcacaatcaacggcagaacgtgttattagaagctctagccatttta
tacattcacgatgggaaatacgacaaagcactcgctatgtatttgaaactacggcacaag
gatgtttttcacttgattcagaaatatcagttgtataatgccgtatatgacatgattgaa
ggtttgatggatttagatacggaacgtgctatacaattttttctggaaaaggacagagtg
ccgactgacatagttgtacaaaaattgcaacataatcatcgttatttatatttgtattta
gatgcattagataaaaaagatacaaaggattcgaaaggcaagtaccatgggcttttggta
cgattgtacgccgattattcgagagacaaattattaccgcttttacgtcgttccgataat
tatccaatacagcaagctttggatatttgtacccaacgtcaattttatccagaaatggtg
tatctgctgggcagaatcggaaacacttcggaagccttggcgcttatgacaagagagctc
aacgatatggaaagtgcaatagcgttttgccaagaacacgacgatgaagaattgtggaat
gatttaattaattactcgcttgacaaacctgccgctattacgtttcttcttcaaaagatc
ggcacctatgtcgatcctagacttatggtgcaaatgatagaacctactttacaaattcca
ggattaaaaaaagcattggttaaaatgatgtgtgactataatctgcaggtgtctgtacag
gaaggttgtaacaaaatattgtctaacgattattttaatctccacgaacgactcgttcat
tgtcatcaaaaaggcatacttattaatgatgatcaaatgtgtggagcctgccataggaaa
ataatcataagagagccgcggaatatgattgtattttattgcaaacattgttttcatgaa
gattgtctacctaatttcgatttgattgaaaattgtgtgatatgcaattcgcaaagagaa
atgatacctagtagaaaatga
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