KEGG   Cardiocondyla obscurior: 139107414
Entry
139107414         CDS       T10704                                 
Name
(RefSeq) integrin beta-PS isoform X1
  KO
K05719  integrin beta 1
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs04145  Phagocytosis
cobs04512  ECM-receptor interaction
cobs04517  IgSF CAM signaling
cobs04518  Integrin signaling
cobs04820  Cytoskeleton in muscle cells
cobs05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    139107414
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139107414
   04517 IgSF CAM signaling
    139107414
   04518 Integrin signaling
    139107414
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    139107414
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139107414
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    139107414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cobs04131]
    139107414
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cobs04147]
    139107414
   04515 Cell adhesion molecules [BR:cobs04515]
    139107414
   04090 CD molecules [BR:cobs04090]
    139107414
Membrane trafficking [BR:cobs04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    139107414
Exosome [BR:cobs04147]
 Exosomal proteins
  Proteins found in most exosomes
   139107414
Cell adhesion molecules [BR:cobs04515]
 Integrins
  Integrin beta subunits
   139107414
CD molecules [BR:cobs04090]
 Proteins
  139107414
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt EGF_integrin Integrin_B_tail I-EGF_1 EGF_Teneurin EGF_2
Other DBs
NCBI-GeneID: 139107414
NCBI-ProteinID: XP_070521092
LinkDB
Position
LG13:3332999..3338481
AA seq 851 aa
MARRAAIIIILHLLGVTARLFVAATSQHRDRESLCESRQTCASCLQTPGCIWCSMTIPEQ
SMNAPFLRCMSEQLYSKKLNLWCDPLAVVQHENTMEVLENQRLSSAKGRDPVQIQPQRIK
LRLRAGEDYRITVKYSQAEDYPVDLYYLMDLSASMEPYRNKLSKLGLQLAQAMQKLTSNF
RIGFGSFVDKVVLPMTSTQPDKLKSPCILKTGEPCATPYDYKNQMPLTENIALFEDRVQT
APVSGNLDGPEGGLDALMQVIVCTIEIGWREKARHLIVFSTDAIFHIAGDGKLAGIVEPN
DCKCHLDEKGFYTYSLLQDYPSISQLNKKAREHNMNIIFAVPDHKNATYQRLSNSISGSS
TGTLENGSQNVVALVSSEYEKLVDSVTMIDTAPNMIDVKYFSRCLNKTGELLERQECGGL
RVGNIIEFEVVLKVTECPKDPKDWYQTMEIKPRGLKESLTIELEMICDCSCEKPGHPGYQ
LNAVQCKGKGTSVCGVCACNPGFYGKQCECEGNNDKSISMTDCKPDNETTEICSGHGTCK
CGICDCDKRPNNPQELFYGKYCQCDNFSCKRSGGQVCGGRGKCECGTCNCLPGWGGETCD
CKETNSTCIPPTGKNIEICSGRGNCICGSCHCHERDNIRYSGQYCEECPTCSGQRCEELK
DCVECVAYNTGPLATNGKCDLCMHEIDIIDTVEEDPVKDEETGARICRTPGDAGCTFVFK
YQYHRAGTGGDIKIFKIQAQKERACPTPVNIFGVALGVVISTVIIGFLILLIWKILTIIH
DKREYTKFEKERALAKWDRGENPLYKQATSTFCNPTFKALNFPNNALRNNESSCMKYYLC
KKLFNLLYYFC
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggcacggcgagcggcgatcatcatcatcctccacctcctcggcgtgacggcgcgcctc
ttcgtggccgcgacctcgcagcatcgcgaccgggaaagcctctgcgagtcgcgacagacc
tgtgcgagctgtctgcaaacgccgggatgcatctggtgctctatgacgatacctgaacag
agcatgaatgctccttttctgcgttgcatgtccgagcaactgtactcgaagaaacttaat
ctttggtgcgacccattggctgtggtacagcatgaaaatacaatggaggtcttggaaaat
caacgattatcttcagccaagggtagagatccagttcaaattcaaccccagaggataaaa
ttacgtcttagagcaggagaagactatcgcataactgtgaaatatagccaggcggaggac
taccctgtagatttatattatcttatggatttatctgcgtctatggaaccgtacaggaat
aagttatcgaaattgggtctgcagctggctcaagctatgcaaaagcttacatcaaatttt
cgtattggttttggtagctttgtagacaaagtcgttttaccgatgactagcacgcagccc
gataaattgaaatctccttgcattttaaaaactggagagccatgtgcaacaccttacgat
tataaaaatcaaatgcctcttacggagaatatagctttatttgaggaccgagtacaaacg
gcgccggtgtcgggtaatttggacggtcccgaaggcggactggatgcattgatgcaggtc
attgtgtgcactatagaaatcggctggcgtgaaaaagcacgtcatcttattgtgttctcg
accgacgcaatcttccacatcgctggagatggtaagcttgcggggatagtagagcctaac
gattgcaagtgccacttggacgagaaaggattctacacttattcccttttacaggattac
ccgtcgatttcccagctcaataaaaaagcacgcgagcacaacatgaatattatctttgct
gtccctgatcacaaaaatgcgacttatcagcgattgagtaacagtatcagcggatcttca
actggaactctggaaaatggttcccaaaatgtcgttgctttagtgagcagcgaatatgaa
aaactagtggactcggtgacaatgatcgatacagcgccaaatatgattgatgttaaatat
ttctctcggtgcttaaacaaaacgggagaattactggaacgacaggaatgcggaggactt
cgcgtaggcaatattatcgagtttgaagttgtgcttaaggttacagaatgtcctaaggat
ccgaaagattggtatcaaactatggagattaaacctagaggtttaaaagaaagtttgact
atcgagctggaaatgatctgcgactgttcttgtgaaaaacctggacacccgggatatcag
ttgaacgcagttcagtgcaagggtaaaggcacatctgtctgcggcgtgtgtgcatgcaat
cctggcttttatggaaagcaatgcgagtgcgagggaaacaacgacaaatcgatctcgatg
actgactgcaaacccgacaacgaaactacggagatctgcagtggtcatggtacatgcaag
tgtggcatttgcgattgtgacaaacgaccaaacaatccgcaggaattattctacggaaag
tactgtcaatgcgacaatttctcctgcaagcgcagtggtggtcaagtctgcggcggacga
ggcaagtgcgaatgcggtacctgcaattgcctaccaggatggggtggtgagacgtgcgac
tgcaaggagaccaacagtacatgcatcccgccgacgggcaagaacatcgagatttgcagc
ggacgcggtaactgcatctgcggcagctgtcactgccacgaacgggacaatatcagatat
tccggacaatattgcgaagaatgtccgacatgctcaggacaacgatgcgaggagctgaag
gattgcgtagagtgcgtggcgtataacacgggaccactcgcaacaaacggaaaatgtgac
ttgtgcatgcatgaaatagacattatcgacaccgtcgaagaagatccggtgaaagacgaa
gaaaccggcgcccgcatatgtcgaacaccgggtgacgcagggtgtacgtttgtttttaaa
tatcagtatcacagagccggtaccggaggagatattaaaattttcaagattcaagcccag
aaagaaagagcttgcccaacacccgttaacatttttggtgttgcactgggcgtcgtcata
agcacagtcatcataggttttctgatcctcctcatttggaagatcctcacgatcattcac
gacaagagggaatacaccaagtttgagaaggagcgcgctctcgccaaatgggatagaggc
gagaatccactgtacaaacaagcgacgtcaactttctgcaatccgacgttcaaagcgttg
aattttccgaataacgcattgagaaataacgaaagttcttgtatgaaatattacttatgt
aagaaattgtttaatttgttatactatttttgttaa

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