Cardiocondyla obscurior: 139107414
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Entry
139107414 CDS
T10704
Name
(RefSeq) integrin beta-PS isoform X1
KO
K05719
integrin beta 1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04145
Phagocytosis
cobs04512
ECM-receptor interaction
cobs04517
IgSF CAM signaling
cobs04518
Integrin signaling
cobs04820
Cytoskeleton in muscle cells
cobs05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
139107414
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139107414
04517 IgSF CAM signaling
139107414
04518 Integrin signaling
139107414
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
139107414
09142 Cell motility
04820 Cytoskeleton in muscle cells
139107414
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139107414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139107414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobs04147
]
139107414
04515 Cell adhesion molecules [BR:
cobs04515
]
139107414
04090 CD molecules [BR:
cobs04090
]
139107414
Membrane trafficking [BR:
cobs04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139107414
Exosome [BR:
cobs04147
]
Exosomal proteins
Proteins found in most exosomes
139107414
Cell adhesion molecules [BR:
cobs04515
]
Integrins
Integrin beta subunits
139107414
CD molecules [BR:
cobs04090
]
Proteins
139107414
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
I-EGF_1
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
139107414
NCBI-ProteinID:
XP_070521092
LinkDB
All DBs
Position
LG13:3332999..3338481
Genome browser
AA seq
851 aa
AA seq
DB search
MARRAAIIIILHLLGVTARLFVAATSQHRDRESLCESRQTCASCLQTPGCIWCSMTIPEQ
SMNAPFLRCMSEQLYSKKLNLWCDPLAVVQHENTMEVLENQRLSSAKGRDPVQIQPQRIK
LRLRAGEDYRITVKYSQAEDYPVDLYYLMDLSASMEPYRNKLSKLGLQLAQAMQKLTSNF
RIGFGSFVDKVVLPMTSTQPDKLKSPCILKTGEPCATPYDYKNQMPLTENIALFEDRVQT
APVSGNLDGPEGGLDALMQVIVCTIEIGWREKARHLIVFSTDAIFHIAGDGKLAGIVEPN
DCKCHLDEKGFYTYSLLQDYPSISQLNKKAREHNMNIIFAVPDHKNATYQRLSNSISGSS
TGTLENGSQNVVALVSSEYEKLVDSVTMIDTAPNMIDVKYFSRCLNKTGELLERQECGGL
RVGNIIEFEVVLKVTECPKDPKDWYQTMEIKPRGLKESLTIELEMICDCSCEKPGHPGYQ
LNAVQCKGKGTSVCGVCACNPGFYGKQCECEGNNDKSISMTDCKPDNETTEICSGHGTCK
CGICDCDKRPNNPQELFYGKYCQCDNFSCKRSGGQVCGGRGKCECGTCNCLPGWGGETCD
CKETNSTCIPPTGKNIEICSGRGNCICGSCHCHERDNIRYSGQYCEECPTCSGQRCEELK
DCVECVAYNTGPLATNGKCDLCMHEIDIIDTVEEDPVKDEETGARICRTPGDAGCTFVFK
YQYHRAGTGGDIKIFKIQAQKERACPTPVNIFGVALGVVISTVIIGFLILLIWKILTIIH
DKREYTKFEKERALAKWDRGENPLYKQATSTFCNPTFKALNFPNNALRNNESSCMKYYLC
KKLFNLLYYFC
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcgagcggcgatcatcatcatcctccacctcctcggcgtgacggcgcgcctc
ttcgtggccgcgacctcgcagcatcgcgaccgggaaagcctctgcgagtcgcgacagacc
tgtgcgagctgtctgcaaacgccgggatgcatctggtgctctatgacgatacctgaacag
agcatgaatgctccttttctgcgttgcatgtccgagcaactgtactcgaagaaacttaat
ctttggtgcgacccattggctgtggtacagcatgaaaatacaatggaggtcttggaaaat
caacgattatcttcagccaagggtagagatccagttcaaattcaaccccagaggataaaa
ttacgtcttagagcaggagaagactatcgcataactgtgaaatatagccaggcggaggac
taccctgtagatttatattatcttatggatttatctgcgtctatggaaccgtacaggaat
aagttatcgaaattgggtctgcagctggctcaagctatgcaaaagcttacatcaaatttt
cgtattggttttggtagctttgtagacaaagtcgttttaccgatgactagcacgcagccc
gataaattgaaatctccttgcattttaaaaactggagagccatgtgcaacaccttacgat
tataaaaatcaaatgcctcttacggagaatatagctttatttgaggaccgagtacaaacg
gcgccggtgtcgggtaatttggacggtcccgaaggcggactggatgcattgatgcaggtc
attgtgtgcactatagaaatcggctggcgtgaaaaagcacgtcatcttattgtgttctcg
accgacgcaatcttccacatcgctggagatggtaagcttgcggggatagtagagcctaac
gattgcaagtgccacttggacgagaaaggattctacacttattcccttttacaggattac
ccgtcgatttcccagctcaataaaaaagcacgcgagcacaacatgaatattatctttgct
gtccctgatcacaaaaatgcgacttatcagcgattgagtaacagtatcagcggatcttca
actggaactctggaaaatggttcccaaaatgtcgttgctttagtgagcagcgaatatgaa
aaactagtggactcggtgacaatgatcgatacagcgccaaatatgattgatgttaaatat
ttctctcggtgcttaaacaaaacgggagaattactggaacgacaggaatgcggaggactt
cgcgtaggcaatattatcgagtttgaagttgtgcttaaggttacagaatgtcctaaggat
ccgaaagattggtatcaaactatggagattaaacctagaggtttaaaagaaagtttgact
atcgagctggaaatgatctgcgactgttcttgtgaaaaacctggacacccgggatatcag
ttgaacgcagttcagtgcaagggtaaaggcacatctgtctgcggcgtgtgtgcatgcaat
cctggcttttatggaaagcaatgcgagtgcgagggaaacaacgacaaatcgatctcgatg
actgactgcaaacccgacaacgaaactacggagatctgcagtggtcatggtacatgcaag
tgtggcatttgcgattgtgacaaacgaccaaacaatccgcaggaattattctacggaaag
tactgtcaatgcgacaatttctcctgcaagcgcagtggtggtcaagtctgcggcggacga
ggcaagtgcgaatgcggtacctgcaattgcctaccaggatggggtggtgagacgtgcgac
tgcaaggagaccaacagtacatgcatcccgccgacgggcaagaacatcgagatttgcagc
ggacgcggtaactgcatctgcggcagctgtcactgccacgaacgggacaatatcagatat
tccggacaatattgcgaagaatgtccgacatgctcaggacaacgatgcgaggagctgaag
gattgcgtagagtgcgtggcgtataacacgggaccactcgcaacaaacggaaaatgtgac
ttgtgcatgcatgaaatagacattatcgacaccgtcgaagaagatccggtgaaagacgaa
gaaaccggcgcccgcatatgtcgaacaccgggtgacgcagggtgtacgtttgtttttaaa
tatcagtatcacagagccggtaccggaggagatattaaaattttcaagattcaagcccag
aaagaaagagcttgcccaacacccgttaacatttttggtgttgcactgggcgtcgtcata
agcacagtcatcataggttttctgatcctcctcatttggaagatcctcacgatcattcac
gacaagagggaatacaccaagtttgagaaggagcgcgctctcgccaaatgggatagaggc
gagaatccactgtacaaacaagcgacgtcaactttctgcaatccgacgttcaaagcgttg
aattttccgaataacgcattgagaaataacgaaagttcttgtatgaaatattacttatgt
aagaaattgtttaatttgttatactatttttgttaa
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integrated database retrieval system