Cardiocondyla obscurior: 139107457
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Entry
139107457 CDS
T10704
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cobs Cardiocondyla obscurior
Brite
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139107457 (Ddx1)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139107457 (Ddx1)
Transfer RNA biogenesis [BR:
cobs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
139107457 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139107457
NCBI-ProteinID:
XP_070521179
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All DBs
Position
LG13:complement(2413473..2417519)
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AA seq
729 aa
AA seq
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MTAFEEMGVLPEIAKAVDEMDWTLPTDVQSEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLESGKGAGTAVVQQSTHWGLSLFDRGRAMAVTLDGLRCQSREQKEWHGCR
ANKGVSGSGKYFFEATVTDEGLCRVGWSTAQAVLDLGTDKFGYGFGGTGKKSNAKQFDNY
GEAFGMHDVIGCFLDLIKGEIKFTKNGIDLGVAFTLNAQQKSQTFYPAVVLKNAEMSFNF
GAQPFKHPPPNDYVAVSSASKESVKHNPVNSNQSSSGESGKLKNNAPQAIIIEPSRELAE
QTYNQIQKFKTHLKDPTIRELLVIGGVNVKEQIAALNSGIDIVVGTPGRLEDLIQGGYLL
LTHCRFFVLDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKKMAE
RLMHFPTWVDLKGEDAVPETVHHVVVMVDPQKDKSWRNLRNCIETDGVHARDDMTRANDI
ACSLSEAVKVLKGEYCIRAIKEHRMDRALIFCRTKLDCDNLERYLKKFGGQQFSCVCLHG
DRKPGERKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVG
RAERMGLAISLVSSVPEKVWYHGEWCPSRGRNCSNTNLTDQGGCCIWYNEPRYLAEIEDH
LNVTIQQVGPDIKVPMNEFDGKVTYGEKRMAMGSDYENHVLQMAPVVTELAALESRAQVA
FLETHIVER
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagaaatgggtgttttgcctgaaatagcaaaagcagttgatgagatg
gattggacactgccaacagatgttcaatctgaggctatcccattgattttgggtggtggt
gatgttctcatggctgcagaaactggtagtggaaaaactggtgctttttgtttgcccatt
ttgcaaatagtttgggagactcttaaagatttggagtctggaaaaggagctggaactgct
gtggttcaacaatcaacacattggggattgagtctttttgatagaggaagagctatggca
gtaacattggatggactaagatgccagagtagagaacaaaaagaatggcatggttgccgt
gcaaataaaggggtatcaggaagtggaaaatatttttttgaagccacagtcactgatgag
ggtttatgccgagtaggctggtctacagcacaggctgtcttagatttaggaacagataaa
tttggttatggatttggtggcacaggaaaaaaatcaaatgcaaaacagtttgataactat
ggagaggcctttgggatgcatgatgtgattggttgttttcttgatttgataaagggcgaa
attaaatttaccaaaaatggtatagatttgggcgttgcatttacattaaatgcacaacaa
aaatcacagactttctatccagctgttgtactgaaaaatgctgaaatgagtttcaatttt
ggagcacagccatttaagcacccacctccaaatgactatgttgctgtatcgtcagcctca
aaagagtctgtcaaacacaatcctgtgaacagtaatcagagttcgtccggtgaaagtggt
aaactaaaaaataatgcacctcaggcgatcattatagagccttctcgcgaattagctgaa
caaacttacaatcaaattcaaaaatttaagacacatttaaaagacccgacaatcagagaa
ttacttgttattggcggagtaaacgtaaaagaacaaattgcggctttaaattctggcata
gacatagtagttggaactcctggtagattagaagatcttattcaaggcggttatttattg
ttaacacattgcaggttttttgtgctggacgaagctgacggtttactaaaacaaggttac
actgaacttatcgatcgtctgcatagacaaattccaaaaattacatctgatggcaaaaga
ttacaaatgattgtctgctcggcaacattacatgcgtttgaagttaagaaaatggctgaa
cgtttgatgcattttccaacttgggtagatttgaaaggtgaagacgcggtgcccgagacc
gtacatcatgtcgtagtaatggtagatccgcagaaagacaaatcgtggcgtaatttgaga
aactgcatagaaactgatggcgtgcacgcaagagacgacatgaccagagcaaatgatatt
gcctgttctttatcagaggctgtgaaagtgctcaaaggagagtactgtattcgcgcaatt
aaagaacatagaatggaccgagcattgatattttgcagaacaaaacttgattgtgataat
ctcgagagatatctaaagaaattcggtggacagcaattctcgtgtgtatgtctgcacgga
gataggaaacccggggagcgtaaagctaacttggaaaagtttaaacgtcaggaggtgaaa
tttttaatttgcactgatgtggctgctagaggattggatatcaccggtctaccttttatg
ataaatgtgactttacccgatgaaaagtctaattatgtgcatcgcattggaagagttggt
agagctgaaagaatgggtttggctatttctttagtaagtagtgtcccagaaaaggtgtgg
tatcacggcgaatggtgtccttctcgcggaagaaactgtagcaatactaatctgaccgat
caaggaggctgctgcatatggtacaatgaaccacgatacttagcagaaattgaggatcat
ttaaacgttacgattcaacaagttggtccggatataaaagtgccaatgaatgagtttgat
ggaaaagttacttacggcgaaaagaggatggcgatgggttctgattacgaaaatcatgtt
ctacaaatggctcctgttgtaaccgaattggctgcgctagaatctagagcacaggttgcg
tttttagaaacgcatatagtagagcgttaa
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