Cardiocondyla obscurior: 139107557
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Entry
139107557 CDS
T10704
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139107557 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139107557 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobs04147
]
139107557 (Vps36)
Membrane trafficking [BR:
cobs04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
139107557 (Vps36)
Exosome [BR:
cobs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139107557 (Vps36)
Exosomal proteins of colorectal cancer cells
139107557 (Vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
139107557
NCBI-ProteinID:
XP_070521354
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All DBs
Position
LG13:complement(1621680..1623808)
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AA seq
402 aa
AA seq
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MNRFEYADSRFMRNEVYVRRDMVVRLYDGDAKTNFENGELILTSHRILWGKPGDISRGNT
CLSLSLQYIVFFEEECSGPFAFGRSKKIILHLCEPVPDKMPGPADNSLYNYVKLSFKEGL
DSNFITQLSDTIMRCMWEFAPTTGINDPNIHNNQENAKLLPRIKTRTGIIGIERSLQEKQ
KETDESISLAFQDLTKLMDMAKDMVAISKTISAKIRARQGDITEDETVRFKAYLMSLGID
DPVTRDAYKSSNEYFEQLAKQLAYILEEPIKEVGGMMTLTDVYCRVNRARGLELLSPEDL
LHASRQLAPLGLPIVLRSFDSGVMVLQIHSHDDNAVVDRISELLQEKGFMTAEDLAQSEG
ISVLLARERLLVTEKYGKACRDDSIEALRFYPNLFLEEMSNE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggttcgagtacgccgattctcggtttatgcgtaacgaggtttatgtgagacgt
gatatggtcgtacgtctctacgacggtgatgcaaagacaaatttcgaaaatggagaatta
attctaactagtcatagaatactctggggcaaacccggcgatatatcacgaggcaacact
tgcttgtcgttgtcgcttcaatatatcgtattttttgaagaagaatgttctggcccattt
gcctttgggcgtagtaaaaaaattattttacatctttgcgaacctgtccctgataaaatg
cctggcccagcagataatagtttgtataattatgttaaattgtcatttaaagaaggtttg
gactctaattttataactcaattatctgatactattatgagatgcatgtgggagtttgcc
cctaccactggaataaatgaccctaatatacataataatcaagaaaatgcaaaattgcta
cctcgaataaaaacgcgaacgggtattataggtattgaaagaagtctacaagaaaaacag
aaagagactgatgaaagtatatcattggcttttcaagatcttacaaagcttatggatatg
gctaaagatatggtagccatttcgaaaaccatttcggctaaaataagggcaagacaagga
gatataacagaggacgaaactgtgagatttaaagcttacttaatgagcttaggtatcgac
gatcccgtaacgagagatgcgtataagagcagcaatgagtacttcgaacaattagcaaag
caacttgcatatatcttggaggagccaataaaggaagtcggcggtatgatgacgctcacg
gacgtttattgtcgtgtaaatagagcgagaggtttagaacttttatctcccgaggacttg
ttacatgccagtagacaattagcgcccttaggtttaccaattgtattaagaagtttcgat
agcggtgttatggttctccaaattcattctcacgatgataatgctgtagtcgatcgtata
tccgagttgttgcaagaaaaaggatttatgacggctgaagatcttgctcagtcagaaggt
atatctgtattattagcacgcgaacgattgctagttacagagaaatatggcaaggcctgt
agagacgattcgatagaagctctaagattttatcccaatctatttttagaagaaatgtct
aacgaataa
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