Cardiocondyla obscurior: 139107659
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Entry
139107659 CDS
T10704
Symbol
Tfiifalpha
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139107659 (Tfiifalpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139107659 (Tfiifalpha)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
139107659 (Tfiifalpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
139107659
NCBI-ProteinID:
XP_070521537
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All DBs
Position
LG13:3054082..3056856
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AA seq
532 aa
AA seq
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MTSSGPSKSSVTSSVQEFSIRVPKLVNSKKKHNVMRFNATLNVDFSKWTQVKMERENNMK
EYKNIEEEMPRFGAGSEFGRDAREEARRKKYGITSRKYKPEDQPWILKSGGKTGKKFKGI
REGGISENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNKVMNY
FSLMLRKRLRNDEDGGDEEELEGGKSKRPGKKEKELKISELDEWMDSDDDESDSDEEETK
KESEDEEDAKKKKKDKAQLQNKKKKKNVSDNEAFEESDDGDEEGRECDYISDSSASEPED
QVKSVAEEDALRKLLASDEDDDDEEQTDKKDNDEDKDEEEEGKEKDDKDKDKFGKEMDKR
KDKKKKKKAKKKDQKKSLSGKDSSSDFSSDSESDSDTAQKEKDNKKSNSAHSSRCSTPTP
AAGVSDSMKRKQSGSPDMSQTKKLKLDNFNLAQVTSYIPGASESGITEDAVRRYLMRKPM
TTTELLQKFKSKKTGLTSEQLVNIMTQILKKINPTKQTIKNKMYLSIKAQSN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagtggaccttcgaaatcctcggttacatcgtcggtgcaggagttcagtatt
cgtgtgccaaagttagtaaatagcaaaaagaagcataatgtaatgagattcaatgccacg
ctgaacgtagatttttcaaagtggactcaagtgaaaatggaacgggagaataatatgaaa
gagtacaagaatatagaagaggaaatgccgaggttcggcgccgggtcggaatttgggcgc
gacgctagagaggaagcaaggagaaagaagtacggtatcaccagtagaaagtataaaccc
gaggatcagccatggatcttgaagtcaggagggaaaactggaaaaaaatttaaaggaatt
cgggagggaggaatcagtgaaaatgctgcatattatgtctttacgcatgctgccgacggc
gccatagaagcctttcctttacacgagtggtataactttcagccaatccaaagatataaa
gcgctcagtgctgaagaagcagagcaggaatttagtcgcagaaacaaggtaatgaattat
ttttcattaatgttacgtaagagattgagaaatgatgaagatggtggagatgaagaagaa
ttagaaggtggaaagagcaagagaccaggtaagaaagaaaaagaattgaaaatatcagaa
ttggatgaatggatggatagtgacgatgatgaatccgatagtgatgaggaagaaactaag
aaagaatctgaggatgaagaagatgcaaaaaagaaaaagaaagacaaagctcaactacag
aacaagaaaaagaaaaaaaatgtctcagataatgaggcgtttgaggaaagtgatgatggt
gatgaagaaggaagggagtgcgattatatttcagattcctctgcttctgaaccggaagat
caggtgaaatctgtcgcagaagaggatgcattgagaaaattgctcgcgtctgatgaagac
gatgacgatgaagaacaaacagataaaaaagacaatgacgaagataaggatgaagaagag
gaaggaaaagaaaaagatgataaagataaagataagtttggtaaagaaatggacaagaga
aaagacaagaagaagaaaaagaaagccaagaaaaaggatcagaagaaatcattgtcggga
aaggattcgtctagcgatttttccagcgattctgagtcagattcagatacagcacaaaaa
gaaaaggataacaaaaagtccaatagcgcgcatagttctcgatgttcgacgccaacacct
gcagctggtgtttcggattctatgaaaagaaaacaatcgggatctccagacatgtcacaa
acgaaaaaattgaaacttgataacttcaatctggctcaagtaacgtcgtatataccggga
gcgagtgaatcgggaatcacggaagatgcggtgaggcgatatttaatgcgtaaaccaatg
accacgactgaactgcttcagaaatttaaatccaaaaaaactggtctcacatccgagcag
cttgttaacattatgactcaaattctgaaaaaaataaatcctaccaaacaaactattaag
aataaaatgtatttatcaattaaagcgcaatccaactaa
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