Cardiocondyla obscurior: 139107759
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Entry
139107759 CDS
T10704
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobs03009
]
139107759
Ribosome biogenesis [BR:
cobs03009
]
Eukaryotic type
90S particles
Other 90S particles
139107759
Pre-60S particles
Other pre-60S particles
139107759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
VPS15-like_hel
INTS1_R4
INTS7_N
TPR_CAND1
Motif
Other DBs
NCBI-GeneID:
139107759
NCBI-ProteinID:
XP_070521680
LinkDB
All DBs
Position
LG13:5574747..5580379
Genome browser
AA seq
1316 aa
AA seq
DB search
MGKLTPRLASRKKAKRWARGQSSSSNPTTTKHREQAIGMFFKEFPGKSGITREDIRKHDA
IEGIEPDFSKLEIDAKTCTTYEHEGTVNGTASTCDTFATNYSACSNLSFSKFLNHFQPSS
LVHKEMLAVLAAVTEVIKQNGGKESSTEYFAALISTLEATEDETSVAATLSLLGMCLRTV
PKNVLNVQFGVASRVLVQILSRHVAEGESHLIPRHCINCLSILLRAQEAAVWANSSTAQV
LDAILSFASHAKPKLRKSAQHGICAILGGSDVIKNDERPHHPAAGQVATHCIAQLEAACA
SSSSLGITTILHILTLLKDIISQLPKSHVKTICELLLSIMTLNNALITSCCLQVLHGLFV
SRPSEATLPFSINASIVRALYDYQPSANDIQPTLAWLAVMREGYCNLAHLALDSSRKDVF
STLEHLVPEMLDKCVGLLLSNQTEIVAGASHTVKAILQECVAPLCKNKERAEPILRHVVE
IMRKTLRYRYSEAWRHVLHLTAVLFQVAGNQVKSETLANVVEALGDLRDSHDFTYNREAE
YAIGAAIRAMGPHVVLNILPLRTDENAINLRRSWMIPLLKDCVTSGTLAFFKDVLLPIAW
RCEAKAKESLADAKVYECLVAQIWSILPSICNDASDVKSNFSHVAKLLGVAISDRRELRL
PAMAALRKLISKATERDDADQVAELARFAKNYIPILFNIYTTRPSGTDEEGTRLAAFETI
KTYMTIASTELANQLFDRALAKLEEPDADDFFKESVYDLMRALIGYTDVDRLSKHYQDVC
VPMFKDDTKRKEQKKAYRFLEEICASEKDVCRQFLRERRRQIEKTLVSSASSVIRTSRGA
RLRCLAYLVKIHPQLEKTKFLEAVVPEAVLCIKDINERCRDAAYRLVNGIAERFLNDPEH
LKDYVDMLMVGLASGERTYVNASLLALASVTYHHNNSLGKETLTEILGHACTIITSPTRE
IAESALSYIKVYINISPFATIASTLPQIVDALTRMTEDCKRHFRIKVRDIFTKLIRKYGF
NSISSMVPNSDVTLHKRLKNINKVEDTKKKRRELERAKITEQDNSEEFDVKKRPKSIQEI
LADSDEEFEATENEEPRTKNKKKVSEKSAWIQENEDNIVDFADPAAARNITTTQPRASNP
KIPQNKVKDRGFAIAPDGRIIIKDNNEKDSDTEERNKKKKKIGFPQNDSEDDYKDEDDVS
VISAGAGKKRKYSESVSDAMSLKSRTTSRYQAGGSGIHRPLKTMKVNSEPGSEYRATKAK
GDIKRKGKPDPYAYVPLTRSLLNKRKKKKNAGKFRSIVSGTKKGVRAGLLNKRRKS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctgacacctcgtttggcaagtagaaagaaagcgaagcgatgggcgcgaggg
caaagctccagttcgaatccgacgacgacaaaacaccgcgagcaagcgattggtatgttt
tttaaagagtttcctggaaagtcaggtattacacgagaggatatacgcaagcacgatgcc
atcgaaggtatcgagccggatttcagtaagctcgaaatagacgcgaaaacgtgtacgaca
tacgagcacgagggcaccgtcaacggcacggcgagcacgtgcgacacgttcgcgacaaat
tacagcgcgtgctcgaatctttcttttagcaagttcctcaatcactttcaaccgagctcg
ctcgttcacaaggagatgctggcggtgctggcagccgtaacggaggtgatcaagcaaaac
ggcggcaaagaaagctctacagagtattttgccgcattgataagcactttagaagcaacc
gaggacgagacctccgtagccgctacattgtcgctgctcgggatgtgtttgagaacggtg
ccgaagaacgttctgaacgtacaatttggagtagcgagtcgcgttctcgtacagattctg
tcgcgacacgttgccgaaggtgagagccatctaattccgcgacattgcataaactgtctc
tcgatactgttaagagcgcaggaggctgctgtttgggccaactcctcgacggcgcaggtg
ctcgacgctatattgtcctttgccagtcatgccaagccgaagttacgcaagtccgcccag
catgggatatgtgcgattctaggaggcagcgatgtgatcaagaacgacgagaggccgcat
cacccggccgcggggcaggtcgcgacgcattgcatcgcccagcttgaagctgcgtgtgcc
tcgtcctcctccctaggaatcaccaccattctgcacattctcacgctgttgaaagacata
atatcgcaattaccaaagtcacacgtgaaaaccatttgcgaacttctgttgagtataatg
acgctgaacaacgccctgataacgtcctgctgtctgcaagtacttcacggattattcgtc
tcgagaccgtccgaggcgacgttacctttctcgataaacgcaagcatcgttagagctctt
tacgattatcaaccgtccgcgaacgatatccagccgactttggcgtggctggcggtgatg
cgggagggttattgcaacctggcacacctcgccttggactcgtcacgcaaggacgtcttc
tcaacactcgaacatctcgtgccggagatgctcgacaaatgcgtcgggctcctgctgtcc
aaccagacggagatcgtcgctggggcgtcgcacaccgtcaaggcgattctacaagagtgc
gtagcgcctctttgcaagaacaaagagcgagccgaaccgattctgagacacgtcgtcgaa
ataatgcgtaaaacgctaaggtatcggtattccgaggcttggcgtcacgttcttcatctt
acggcagtactttttcaggtagccggcaaccaagttaaatccgagacgcttgctaacgtt
gtcgaggctctaggggatctgcgagactcgcacgatttcacgtacaatcgcgaggctgag
tacgcgattggagcagcaatccgggctatgggacctcacgtcgtcttgaacatccttcct
cttcggaccgacgaaaatgcaattaatctcagacggagctggatgatcccgctacttaaa
gattgcgtgactagtggcactttggccttcttcaaagacgttttgctaccaatcgcatgg
cgatgcgaggcgaaagccaaggaatcgctcgcggacgccaaggtgtacgaatgcttggta
gcgcaaatctggtccatcttaccgagcatatgcaacgatgctagtgatgtcaagagcaac
tttagccacgtcgccaagctgttaggtgtagctatcagcgaccggcgggaactgagatta
cccgcgatggcagccttaagaaaattaatcagcaaggcgacggaacgggatgacgccgat
caggttgccgagcttgctcgctttgccaagaattacataccgattctcttcaacatatat
acgacgagaccaagtggtacggacgaagaaggaacgcgtctcgccgcgttcgagaccatc
aagacttacatgacaattgcgagtaccgagctggcgaatcaattattcgatcgggcattg
gccaagctcgaggaacccgacgcggacgatttcttcaaggaaagcgtttacgatctcatg
agagcgctaatcggttatacggacgttgacaggctgagcaagcattaccaagacgtttgc
gtaccgatgttcaaggacgacactaagcggaaagagcaaaagaaggcttatcgtttcctc
gaggaaatatgcgccagcgaaaaagatgtctgcagacaattcctgcgtgaacgccggcgc
caaattgaaaagactctcgtatcctcggcgagtagcgtgatcaggacgagtaggggcgca
cgtctgcgatgtctcgcatacctcgttaaaatacatccgcagcttgagaagaccaagttt
ctcgaggccgtcgtgccggaagctgtgctctgtattaaagatatcaacgaaaggtgtcgt
gacgcggcgtatcggctagtcaacgggatcgccgaaagatttctcaacgatcctgaacat
ctcaaggattacgtggacatgctgatggtgggtttagcgagcggcgagcgaacgtatgtt
aacgccagtctcctcgctctggcgtctgttacttatcatcacaataattctctcggcaaa
gaaacgctcaccgagatcttaggacacgcctgcaccattataaccagtcctacgagagag
attgcagagtctgcattatcctatatcaaagtctacattaacatttctccattcgctacg
atagcatcgacattgccgcaaatagtggacgctctgacgcgaatgaccgaggattgtaag
cgtcactttcggataaaagtgcgagacatctttactaaactgattagaaaatacggcttt
aattcgatatcgagtatggtgccgaactcggacgtgacgctacataagagattgaagaac
atcaacaaagtagaagatacgaagaaaaagaggcgagagcttgaaagggcgaaaataaca
gaacaggataacagtgaagaatttgacgtgaaaaagagacctaaaagtatccaagagata
ttggccgatagcgacgaggagttcgaagctacagagaatgaagaaccgaggacgaaaaac
aagaaaaaagtatcggaaaagagcgcttggattcaggagaacgaagataacatagtcgat
ttcgcggatcccgcagctgctagaaatattacaactacgcaacctcgtgcatcaaatcca
aagattccacaaaataaagtgaaagatcgtgggttcgcgattgcacccgatggccgtatc
atcattaaggataataacgagaaagatagtgatactgaagaaagaaataaaaaaaagaaa
aagattggttttcctcagaacgattcggaagacgattacaaagacgaagatgatgtatcg
gtgatcagcgctggcgctggcaaaaaacgcaagtacagtgaaagtgtatcggacgcgatg
agcttaaagagtcgaacaacgtcgagatatcaagcgggtggatcgggtattcatcgaccg
ctaaaaacaatgaaagtaaattctgaacctggttcagaatatcgtgcgacaaaagctaag
ggagatattaagagaaagggcaagccagatccttacgcatatgtacctttaacgagatca
ctattgaataaaagaaaaaagaagaaaaatgccgggaagtttcgaagtatagtttctggg
acgaaaaaaggcgtccgcgctggtttactaaataaacgaagaaaatcttaa
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