KEGG   Cardiocondyla obscurior: 139107759
Entry
139107759         CDS       T10704                                 
Name
(RefSeq) RRP12-like protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
cobs  Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cobs03009]
    139107759
Ribosome biogenesis [BR:cobs03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    139107759
  Pre-60S particles
   Other pre-60S particles
    139107759
SSDB
Motif
Pfam: RRP12_HEAT HEAT_RRP12_N VPS15-like_hel INTS1_R4 INTS7_N TPR_CAND1
Other DBs
NCBI-GeneID: 139107759
NCBI-ProteinID: XP_070521680
LinkDB
Position
LG13:5574747..5580379
AA seq 1316 aa
MGKLTPRLASRKKAKRWARGQSSSSNPTTTKHREQAIGMFFKEFPGKSGITREDIRKHDA
IEGIEPDFSKLEIDAKTCTTYEHEGTVNGTASTCDTFATNYSACSNLSFSKFLNHFQPSS
LVHKEMLAVLAAVTEVIKQNGGKESSTEYFAALISTLEATEDETSVAATLSLLGMCLRTV
PKNVLNVQFGVASRVLVQILSRHVAEGESHLIPRHCINCLSILLRAQEAAVWANSSTAQV
LDAILSFASHAKPKLRKSAQHGICAILGGSDVIKNDERPHHPAAGQVATHCIAQLEAACA
SSSSLGITTILHILTLLKDIISQLPKSHVKTICELLLSIMTLNNALITSCCLQVLHGLFV
SRPSEATLPFSINASIVRALYDYQPSANDIQPTLAWLAVMREGYCNLAHLALDSSRKDVF
STLEHLVPEMLDKCVGLLLSNQTEIVAGASHTVKAILQECVAPLCKNKERAEPILRHVVE
IMRKTLRYRYSEAWRHVLHLTAVLFQVAGNQVKSETLANVVEALGDLRDSHDFTYNREAE
YAIGAAIRAMGPHVVLNILPLRTDENAINLRRSWMIPLLKDCVTSGTLAFFKDVLLPIAW
RCEAKAKESLADAKVYECLVAQIWSILPSICNDASDVKSNFSHVAKLLGVAISDRRELRL
PAMAALRKLISKATERDDADQVAELARFAKNYIPILFNIYTTRPSGTDEEGTRLAAFETI
KTYMTIASTELANQLFDRALAKLEEPDADDFFKESVYDLMRALIGYTDVDRLSKHYQDVC
VPMFKDDTKRKEQKKAYRFLEEICASEKDVCRQFLRERRRQIEKTLVSSASSVIRTSRGA
RLRCLAYLVKIHPQLEKTKFLEAVVPEAVLCIKDINERCRDAAYRLVNGIAERFLNDPEH
LKDYVDMLMVGLASGERTYVNASLLALASVTYHHNNSLGKETLTEILGHACTIITSPTRE
IAESALSYIKVYINISPFATIASTLPQIVDALTRMTEDCKRHFRIKVRDIFTKLIRKYGF
NSISSMVPNSDVTLHKRLKNINKVEDTKKKRRELERAKITEQDNSEEFDVKKRPKSIQEI
LADSDEEFEATENEEPRTKNKKKVSEKSAWIQENEDNIVDFADPAAARNITTTQPRASNP
KIPQNKVKDRGFAIAPDGRIIIKDNNEKDSDTEERNKKKKKIGFPQNDSEDDYKDEDDVS
VISAGAGKKRKYSESVSDAMSLKSRTTSRYQAGGSGIHRPLKTMKVNSEPGSEYRATKAK
GDIKRKGKPDPYAYVPLTRSLLNKRKKKKNAGKFRSIVSGTKKGVRAGLLNKRRKS
NT seq 3951 nt   +upstreamnt  +downstreamnt
atgggcaagctgacacctcgtttggcaagtagaaagaaagcgaagcgatgggcgcgaggg
caaagctccagttcgaatccgacgacgacaaaacaccgcgagcaagcgattggtatgttt
tttaaagagtttcctggaaagtcaggtattacacgagaggatatacgcaagcacgatgcc
atcgaaggtatcgagccggatttcagtaagctcgaaatagacgcgaaaacgtgtacgaca
tacgagcacgagggcaccgtcaacggcacggcgagcacgtgcgacacgttcgcgacaaat
tacagcgcgtgctcgaatctttcttttagcaagttcctcaatcactttcaaccgagctcg
ctcgttcacaaggagatgctggcggtgctggcagccgtaacggaggtgatcaagcaaaac
ggcggcaaagaaagctctacagagtattttgccgcattgataagcactttagaagcaacc
gaggacgagacctccgtagccgctacattgtcgctgctcgggatgtgtttgagaacggtg
ccgaagaacgttctgaacgtacaatttggagtagcgagtcgcgttctcgtacagattctg
tcgcgacacgttgccgaaggtgagagccatctaattccgcgacattgcataaactgtctc
tcgatactgttaagagcgcaggaggctgctgtttgggccaactcctcgacggcgcaggtg
ctcgacgctatattgtcctttgccagtcatgccaagccgaagttacgcaagtccgcccag
catgggatatgtgcgattctaggaggcagcgatgtgatcaagaacgacgagaggccgcat
cacccggccgcggggcaggtcgcgacgcattgcatcgcccagcttgaagctgcgtgtgcc
tcgtcctcctccctaggaatcaccaccattctgcacattctcacgctgttgaaagacata
atatcgcaattaccaaagtcacacgtgaaaaccatttgcgaacttctgttgagtataatg
acgctgaacaacgccctgataacgtcctgctgtctgcaagtacttcacggattattcgtc
tcgagaccgtccgaggcgacgttacctttctcgataaacgcaagcatcgttagagctctt
tacgattatcaaccgtccgcgaacgatatccagccgactttggcgtggctggcggtgatg
cgggagggttattgcaacctggcacacctcgccttggactcgtcacgcaaggacgtcttc
tcaacactcgaacatctcgtgccggagatgctcgacaaatgcgtcgggctcctgctgtcc
aaccagacggagatcgtcgctggggcgtcgcacaccgtcaaggcgattctacaagagtgc
gtagcgcctctttgcaagaacaaagagcgagccgaaccgattctgagacacgtcgtcgaa
ataatgcgtaaaacgctaaggtatcggtattccgaggcttggcgtcacgttcttcatctt
acggcagtactttttcaggtagccggcaaccaagttaaatccgagacgcttgctaacgtt
gtcgaggctctaggggatctgcgagactcgcacgatttcacgtacaatcgcgaggctgag
tacgcgattggagcagcaatccgggctatgggacctcacgtcgtcttgaacatccttcct
cttcggaccgacgaaaatgcaattaatctcagacggagctggatgatcccgctacttaaa
gattgcgtgactagtggcactttggccttcttcaaagacgttttgctaccaatcgcatgg
cgatgcgaggcgaaagccaaggaatcgctcgcggacgccaaggtgtacgaatgcttggta
gcgcaaatctggtccatcttaccgagcatatgcaacgatgctagtgatgtcaagagcaac
tttagccacgtcgccaagctgttaggtgtagctatcagcgaccggcgggaactgagatta
cccgcgatggcagccttaagaaaattaatcagcaaggcgacggaacgggatgacgccgat
caggttgccgagcttgctcgctttgccaagaattacataccgattctcttcaacatatat
acgacgagaccaagtggtacggacgaagaaggaacgcgtctcgccgcgttcgagaccatc
aagacttacatgacaattgcgagtaccgagctggcgaatcaattattcgatcgggcattg
gccaagctcgaggaacccgacgcggacgatttcttcaaggaaagcgtttacgatctcatg
agagcgctaatcggttatacggacgttgacaggctgagcaagcattaccaagacgtttgc
gtaccgatgttcaaggacgacactaagcggaaagagcaaaagaaggcttatcgtttcctc
gaggaaatatgcgccagcgaaaaagatgtctgcagacaattcctgcgtgaacgccggcgc
caaattgaaaagactctcgtatcctcggcgagtagcgtgatcaggacgagtaggggcgca
cgtctgcgatgtctcgcatacctcgttaaaatacatccgcagcttgagaagaccaagttt
ctcgaggccgtcgtgccggaagctgtgctctgtattaaagatatcaacgaaaggtgtcgt
gacgcggcgtatcggctagtcaacgggatcgccgaaagatttctcaacgatcctgaacat
ctcaaggattacgtggacatgctgatggtgggtttagcgagcggcgagcgaacgtatgtt
aacgccagtctcctcgctctggcgtctgttacttatcatcacaataattctctcggcaaa
gaaacgctcaccgagatcttaggacacgcctgcaccattataaccagtcctacgagagag
attgcagagtctgcattatcctatatcaaagtctacattaacatttctccattcgctacg
atagcatcgacattgccgcaaatagtggacgctctgacgcgaatgaccgaggattgtaag
cgtcactttcggataaaagtgcgagacatctttactaaactgattagaaaatacggcttt
aattcgatatcgagtatggtgccgaactcggacgtgacgctacataagagattgaagaac
atcaacaaagtagaagatacgaagaaaaagaggcgagagcttgaaagggcgaaaataaca
gaacaggataacagtgaagaatttgacgtgaaaaagagacctaaaagtatccaagagata
ttggccgatagcgacgaggagttcgaagctacagagaatgaagaaccgaggacgaaaaac
aagaaaaaagtatcggaaaagagcgcttggattcaggagaacgaagataacatagtcgat
ttcgcggatcccgcagctgctagaaatattacaactacgcaacctcgtgcatcaaatcca
aagattccacaaaataaagtgaaagatcgtgggttcgcgattgcacccgatggccgtatc
atcattaaggataataacgagaaagatagtgatactgaagaaagaaataaaaaaaagaaa
aagattggttttcctcagaacgattcggaagacgattacaaagacgaagatgatgtatcg
gtgatcagcgctggcgctggcaaaaaacgcaagtacagtgaaagtgtatcggacgcgatg
agcttaaagagtcgaacaacgtcgagatatcaagcgggtggatcgggtattcatcgaccg
ctaaaaacaatgaaagtaaattctgaacctggttcagaatatcgtgcgacaaaagctaag
ggagatattaagagaaagggcaagccagatccttacgcatatgtacctttaacgagatca
ctattgaataaaagaaaaaagaagaaaaatgccgggaagtttcgaagtatagtttctggg
acgaaaaaaggcgtccgcgctggtttactaaataaacgaagaaaatcttaa

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