Cardiocondyla obscurior: 139107764
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Entry
139107764 CDS
T10704
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139107764 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139107764 (Taf5)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139107764 (Taf5)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139107764 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
139107764 (Taf5)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139107764 (Taf5)
STAGA complex
139107764 (Taf5)
TFTC complex
139107764 (Taf5)
SAGA complex
139107764 (Taf5)
SLIK complex
139107764 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_RIG_1st
WD_LRWD1
Cytochrom_D1
VPS8_N
ERp29
Motif
Other DBs
NCBI-GeneID:
139107764
NCBI-ProteinID:
XP_070521685
LinkDB
All DBs
Position
LG13:3217247..3220627
Genome browser
AA seq
651 aa
AA seq
DB search
MDNDKSTMLAVLQLLKKYNLKGTEELFRREANLTDISIDEAQSDSDVTSVLSAYKSEGDP
AHYEKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFSGNL
EEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLLN
IIQEHLYFDMYEGVARNKQQIEATSGAMVGEATRQDNKAKVYYGLLKEPDIQCVPPAEEE
EDDTGGGDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMSLPNLKDADKLEKIKALREAS
KRVILGPDTLPSICFYTMLNTAYTVTAAEVAEDSSLLATGFSDSGIKVWSLVPQKLRLMK
TGENLQEISRDADDVLVRMMDERTSETARNLYGHNGPIYSLSFSPDRNLLLSSSEDTTIR
LWSLHTWTCVVCYKGHLFPVWCVKFSSHGYYFASASNDKTARLWATDSHQPLRIFAGHYS
DVDVIQFHPNSNYVASGSSDMTVRLWDCVTGSQVRLMTGHKGPIFSLAFSTEGRFLASAG
ADHRVLMWDLAHGHLVAALSGHTANVHCLSFSRDGNILVSGSLDYTLRLWDFTKLAEEMS
LEDVNVSHNPDVKTNSESYLLRTFATKNTSVLALHFSRRNLLLGVGMFDSG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaagagtaccatgctcgctgttttgcagctgttgaagaagtataattta
aagggcaccgaagagttatttagaagagaagctaatcttaccgatatctcaattgatgag
gctcaatctgattctgacgtaaccagcgttctttcagcttacaaaagtgaaggagatcct
gctcattatgagaaagcatacagcgaattaaagaagtttgtagaaggagctttagatatt
tataaacatgaattgggaacaatattgtatccagttttggtgcatatgtatctggaatta
gtttataataatcactctaaagaagcaaagcaactcatggaaaagtttagtggaaacttg
gaagaatattatcaagatgacttaaaaagattatctaatgtaacaaaacgagaacaaatg
gcagggaatgaattaactgacacttttaaatcaaatcagtttataatcagaatgtcaagg
gatactctttcgatattaaaacgacatttgcaagaaaaaaaacatagcgttttactgaat
atcatacaggagcatctttattttgatatgtatgaaggtgttgctcgcaataaacaacag
atagaagcaacatctggagctatggtaggagaggctactagacaagataacaaggccaaa
gtctattatggactcttaaaggaacctgatattcagtgtgtaccgccagctgaagaagag
gaggatgacacaggtggtggagatggtgataaaccaaagaaaaaaaaggctaaaaaagat
ccattattttcaaagaaaactaaatctgatccgaatgcaccaccagtgggcagaatgtcg
ttacctaatctaaaagatgcggataaattagaaaaaatcaaggcgttgagagaagcgtcg
aaaagagttattctcggacctgatacattaccgtctatatgtttttatacaatgttaaac
actgcctatactgtaacagcagcggaagtggcggaagactcaagtttattagctaccgga
tttagtgattctggtattaaagtatggagtttagttccacaaaaactgagattgatgaaa
acgggagaaaatctgcaagaaattagcagagatgcagatgacgtattagttagaatgatg
gatgaacgaacatctgaaactgcgagaaatctctatggtcataatgggccaatttatagc
ctttcattcagtccagatagaaatttactgctttcgtcatcagaggatactacaataaga
ctgtggtcactacacacgtggacatgtgtcgtctgttacaaaggccatttatttcccgta
tggtgtgtaaaattttcatcgcatggttattattttgcaagtgcctcgaacgacaaaact
gccagattatgggccactgattctcatcagccattgcgaatatttgctgggcattactcg
gatgttgatgtaattcagtttcatccaaattcgaattatgtcgcgagtggttcaagcgat
atgaccgtgagattgtgggattgcgtaactggcagtcaagtccgattaatgactggacat
aaagggccaattttttctttggctttttcaacagagggtcgatttttagcttcagctgga
gcagatcatcgagtgctcatgtgggatttggcacacggtcacctcgttgcagccttatct
ggccatacggctaatgtgcactgcttatcatttagtcgagacggcaatattctagtttca
ggttccttagactatacattgagattatgggattttacaaaattagcggaagaaatgagc
ctggaagacgtcaatgtatcgcacaacccagatgtgaaaactaactcagaatcttattta
ctacgtacctttgctaccaagaatacgtctgttctggcattacatttttcacgtagaaat
ttattgcttggtgttggcatgttcgactcgggataa
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