Cardiocondyla obscurior: 139107818
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Entry
139107818 CDS
T10704
Symbol
Ge-1
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139107818 (Ge-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139107818 (Ge-1)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139107818 (Ge-1)
mRNA degradation factors
5'-3' decay
Decapping complex
139107818 (Ge-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Syntaxin
Motif
Other DBs
NCBI-GeneID:
139107818
NCBI-ProteinID:
XP_070521772
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Position
LG14:complement(818105..823933)
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AA seq
1092 aa
AA seq
DB search
MPERDTAGDMSKTGEDNMRHLHYQQTVEFSGREDQHSVELCSTNVTIISSPGDHDHGSSK
VKLKNIVDFTWDHHLYTGQLLAVHVSGKYLAYGLKVGSGGGVVRVVYKELEHRALLRGMR
GAIQDLAFAHVSNAILACIDYTGTLFIHTCEPTPSELKCTLVLQVDAEDVSPTSHRVIWC
PYIPEDDTSDGDEVSKLLVVTRGSKVELWSVATIAARFSSIVEATDPSIKESGSMMEISQ
HSGTIVEATLSPDGTALATASTDGEVKFFQVFLHNNSHNNQPQPRCLHQWMPHGGRPISC
LFFLDDHKNYQPDVQFWRFAVTGCDNNSELKVWSCELWTCLQTIKFAPNPSTGKVPVLKA
GLDLSAGYLFLSDIHNKILYILSLSKDKGEALACISTVSEFLLPYPILSFGIVDADQRKI
RPISESLEDLCEEIEENDEELVIYMYLVQPKSLQECHIAFKPASQARGNYQGTLTHDSLD
YTEDMPDMETVTHNGMSEENCDRERSLSTTIETTINHSGGGLNLMTPDAFSSPAKKENNE
LESNPDSPDLRKVLSSSPIAQAVQALNASDPPLVKNEIEEQTPASCGSSPSREVREIMSL
TKPDEEIDIDVKTEPKTNADEDWSNIPMVLLKDVSVHAMQESEEFLEDDETNVQRQKIKD
ESKTLALPNDDPGISGSWRTANDSIELMNSKLISVIDSIQTQCEEIKKLRTEINILRQES
PVSTQVESALTRMSQQQNANLEQTLYNQMGRQREFLNTFETTMKDKIESTLPRTIEDTIK
PLKHQIRLDTNKMDELFQRNIIELINSSQVKDTLSLTASNAAKPALDVAFKEAFTTVLLP
NMEKICQIMFKQIQDTFVKGTHEYLQHIDTIIDKQYQRHNEQLSEMLSTLIREEIQTELN
RTLTTMQDNTIRTIRDSIRENLNQQLTEISSARSRATTPAIPVTAVADAQARVMSLLQRG
QLNAAFQQALSASDLGLVVLVCEKAEPARVFSCPGANGQPSRCILQQPVILSLVQQLSAD
LGHRTELKHRWLEEAILNLDPSDPVTREHMGTVLMTLQNQLATFVASNPNHRSTRRMKML
AMATRALLSQHP
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagagggacacggccggcgacatgagcaagaccggggaggacaatatgaggcat
ctccactatcaacagacagtggagttcagtggacgggaagatcaacattcagttgagtta
tgtagcacaaatgtaaccattatctcttctcctggtgatcatgatcatggtagttctaaa
gtaaaattgaagaatattgttgattttacatgggatcatcacctttatactggccaattg
ctagctgttcatgtatctggaaaatatttagcttatggtttaaaagttggttccggtggt
ggggtagttcgtgttgtatacaaagagttagaacatagagctctgctgcgaggaatgcgt
ggtgctattcaagatcttgcatttgcccatgtttcaaatgcaattcttgcgtgtattgat
tatacaggaacactttttatacatacatgtgaacctaccccttctgaactaaaatgtact
ttagtattacaagtagacgctgaagacgtttctccaactagtcaccgagtaatttggtgt
ccatatatcccagaggatgatacctctgatggagatgaagtatcaaaattattagtcgta
actcgtggctctaaagttgaattatggtcggttgcaacaatagcagcaagatttagttca
atagtagaggcaacagatccgagtattaaagaaagtggtagcatgatggaaattagtcaa
cattctggaactattgtagaagctacacttagtccagatggtactgcattagcaacggct
agtacagacggtgaagtaaaattctttcaagtcttccttcataataattcccacaataac
caaccacagccacgttgtttgcatcaatggatgcctcatggaggacgacctatttcttgc
ctgtttttcctggatgatcataaaaattatcaacctgatgttcagttttggagatttgct
gtgaccgggtgtgacaataactcagaattaaaagtatggtcatgcgaattgtggacttgc
ttacaaacaatcaaatttgctccaaatccttctacgggcaaagtgccggtattaaaagcg
ggattagatcttagcgcgggttatctatttctatcagatatacataataaaattttatat
atactaagtctttcaaaagataaaggtgaggcgctagcatgcataagcacggtatcagag
tttctcctgccatatccaattctaagttttggaattgttgacgccgatcaacgtaaaatt
cggccaattagcgaatcactagaagatctatgtgaagagatcgaagaaaacgatgaagaa
ctcgttatttacatgtatctagtccaaccaaagtcattacaagaatgtcacattgctttc
aaacctgcctctcaagcaagagggaactaccaaggtacacttactcatgattcactggat
tatacagaggatatgcctgatatggaaactgttactcataatggcatgtctgaagaaaat
tgtgaccgagaacggtctttatctactacgatcgaaacaacaattaatcatagtggtggt
ggtttaaacttaatgacaccagatgcatttagttcacccgcaaaaaaagagaacaacgaa
ttggaatctaatccagatagtccagatttgagaaaagttttatctagtagtcctattgca
caagcagtgcaagctttgaatgcatctgatccgccgcttgtaaaaaacgaaatagaagaa
caaactcctgctagttgcggtagcagtccatctagagaagtgagagaaattatgtctctt
actaaaccagatgaagaaattgatattgacgtcaaaacagaaccgaaaaccaatgccgat
gaagattggtctaatatcccaatggttttgcttaaagacgttagcgtacatgcgatgcaa
gagtcagaagaatttcttgaagacgatgagactaatgtgcaaaggcaaaaaataaaagat
gaatcgaaaacgttagccctccctaacgacgatcctggaatatcaggaagctggcgaaca
gctaacgatagtattgaattaatgaacagtaaattgatatctgttatagatagtattcaa
actcagtgtgaagaaataaaaaaattacgtacagaaattaacatattacgacaagaatcg
ccagtatccacgcaagtagaatctgcattgacaagaatgtctcagcagcaaaatgcgaat
ttagaacaaactctatataatcaaatgggtcgacaacgtgagtttttaaatacgtttgag
acaacgatgaaagataagattgaaagtaccctgccacgtacaattgaagacacgataaaa
cctttaaaacatcaaatcagattagatacaaataaaatggatgaactctttcagaggaat
ataattgaattaataaacagttctcaagtaaaagatacgttatctttaacagcttcaaat
gctgccaaaccagctctggatgttgcttttaaagaagctttcacaactgttcttttacct
aatatggaaaaaatttgccaaattatgtttaaacaaattcaggatacttttgttaagggc
actcatgaatatttacaacatattgatacaattatcgataaacaatatcaacgtcataac
gaacaactaagtgaaatgttatcaacattgatacgtgaagaaattcaaactgaattgaat
agaactttaacaactatgcaagataatactattcgaacaatccgagattctattcgagaa
aatctaaatcaacaacttacagaaatttcgagtgcacgatcaagagctacaactcctgct
atacccgtaaccgctgtagccgatgctcaagcacgcgtcatgtcgcttcttcaaagaggt
caactaaacgctgcttttcaacaagctttgagtgcaagtgatttaggattggtagtgtta
gtatgtgaaaaagcagaacctgcaagagtattttcatgtccaggcgccaatggacaacct
tcaagatgtattttacagcagcctgttattctttctcttgtacaacaactgtcggctgat
ttaggacatcgtacagaattaaagcacaggtggctagaagaagcaatattgaatttagat
ccaagtgatcccgtaacacgagagcatatgggtacggtgctaatgactttacaaaatcaa
ttagcaacatttgtagcaagtaatccgaatcatcgatcaacgcgtcgtatgaaaatgctc
gctatggctacgcgtgcattattaagtcaacatccttga
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