Cardiocondyla obscurior: 139107888
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Entry
139107888 CDS
T10704
Symbol
Tomosyn
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139107888 (Tomosyn)
Membrane trafficking [BR:
cobs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139107888 (Tomosyn)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139107888 (Tomosyn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Synaptobrevin
EIF3I
Beta-prop_VPS8
Beta-prop_LRRK2
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
WD40_like
WD40_RFWD3
KNTC1_N
IL3Ra_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
139107888
NCBI-ProteinID:
XP_070521859
LinkDB
All DBs
Position
LG14:complement(2909601..2945344)
Genome browser
AA seq
1357 aa
AA seq
DB search
MKKFTIKGVLDGFRSSVPQPTKPDQEIVENLRPEHFQVKKTFRHGFPHQPTALAFDPVQR
LLAIGTKSGSLRILGRPGVDAHVKHEECAAVLRLQFLINEGALVSATEDDTLHLWNFRQK
IPQVVHSLKFQRDRISCIHLPLQSKWLYIGTERGNVHILHIETFVLSGYVINWNKAIEVS
RKTHPGAVVHLSDNPLDLSKMLIGFQSGQIVMWDLKTKTADYRCQMDDTSITSITWHHEG
KQFMCSHTDGSLSTWTVRQVKPTVTFPHAKFSKDGEPERCKPIQKVEWKLSRSGEAYVIF
SGGLAQDTTGRTPSITVIHGKTTTVLEMEHNVVDFITLCDSPWASDFQDPYAVVVLLQND
LVVIDLLTTGFPCFENPYPMDIHESPVTCCAYFADCPSDLVPAFYSVGSKSQKKTGFSEK
EWPISGGEWSSSSSSYNEIILTGHADGSIKFWDASAGTLQVLYKLKTAKLFEKIKTRSID
NEEDPLAIQLIFLCPESRKLAIAGSGKHVVLFKFKKVESMSEVVTLEICLSVDPTRDPDN
SPDRESPATGNIVGNVESKTIEFNHPVKVKTGLQKRTPGFQATLICLTTAPPGEQPENIT
SLSLNSSYGLMAYGNESGLVIVDIVQKISLIVLNTSDLGSGDPYQRVLRSPKRQDELKRE
NEDKARSPSTDQSQRESAMESEPVITRITDSIQQVQQQQQCPRTESQTGNSSDKSSAEET
TNESNKAGNIPNGDECQKSQGWKGFSLKRQLSKVDLKIKNTFTPSSVSSQNGVLSSSSGL
MQVPQCQQIGSDAGNQKSSTFYCNINEAASTSRSLSPVESVDSESSLSPESQSPGHESPQ
TDDRRREIQGARSPTESESEKTITSHDNIAGKTEAVRPMNLSLPEHEAKPPRLRYIAKIK
QAKREGRLLSVPNLKFSKNEPTVCDLRCDESGTSESFTGNLIRRFNKFDGSFQRSRSSSM
SSLENITTETISCLTFADSYTKKNDTNGMPTLWIGTSLGSVQTVIFNTPPHSERHAHPVV
VSTCNGSTFKLKGCILSMSFLDCNGALIPYSYESWKDESTDGKERNKSQGKCTNSRMSPS
TNTQVSGDNFEDRQFVVLASEKQARVVALPSQNCVYRQQLADSHIVIKAEVTSLKDNVCL
VCYVSNGHITTYSLPSLRPLIDVDFVPLIDLSFQTTKHGIVDPMLSIWGHQLFVNGDTDQ
IAKTLCFSNRGHGLYLSSPMEIHKFSISSEFCGELTEMMGDLFIGHDMPEPPKEGFFKGL
FGGGSRSLDREELFGESSGRASRTVAKHIPGPNEALRERVSSATGEVNIAYQAVMERGDK
LSQLEERTARMMSEAENFSTSAHGLMLKYKDKKWYQL
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcacgatcaagggtgtactcgacgggttccggtcgtcggtcccgcagccc
accaagcccgaccaggagatcgtcgagaatctcaggccggagcactttcaagttaagaag
acattcagacacggcttcccgcatcagccgacagcgttggcattcgacccagttcaaagg
cttctagctattggcactaaatcaggatccctcaggattttgggtagaccgggcgtggat
gcacacgttaaacacgaagaatgtgcggccgtgctacgactgcagttcctgatcaacgaa
ggagcgctggtatccgctacggaggacgacaccttgcatttatggaacttccgtcagaag
ataccgcaggtggtacacagcctcaagtttcaaagagacagaatctcttgcattcattta
ccgctgcaaagtaaatggttatacatcgggaccgagcgaggaaacgttcacatactgcac
attgaaacgttcgttctatctggatatgtaattaattggaacaaggctatcgaagtatct
agaaagactcaccctggcgctgtagtacacttgagtgataatcctttagatttgagcaag
atgctcataggatttcagtcagggcaaattgttatgtgggatttaaaaaccaagactgct
gactatagatgtcaaatggacgatacatctataacatcgataacatggcaccacgagggt
aaacaatttatgtgcagccatacagacggttctctttcgacttggactgttcggcaagtt
aagccaacggtgacatttccacatgcaaaattcagtaaagacggagaaccggaacgttgc
aaacccattcagaaagtggaatggaagttgtcgagatcgggagaagcatatgtgatattc
tctggtggattggcacaggacaccactgggagaacacctagcattacagtgatacatgga
aaaactactacggtgctggaaatggaacataatgttgtagactttataacgctatgtgat
agtccgtgggctagtgattttcaagatccttatgctgttgtcgttttactacaaaatgat
ctggttgtgatagatttgttaactactggattcccttgttttgagaatccatatcctatg
gatattcatgaatctcctgtgacatgctgtgcatatttcgcggattgcccttcggatcta
gtacctgcattttattctgttggatccaaatcacagaaaaaaaccggctttagcgagaaa
gaatggcctatctctggtggcgagtggagctccagttctagcagttataacgagattatc
ctcaccgggcacgccgatggcagtatcaagttttgggacgcttcagcgggaacattacaa
gttctttacaaactaaaaacggcaaaactttttgaaaaaattaaaacacgtagtatagat
aatgaggaagatccgttagcaattcaacttatcttcctttgtcctgaaagtcgaaaatta
gctattgcgggtagcggcaagcacgtcgtgttgttcaaatttaagaaggttgaaagtatg
tctgaagtagtgacgttggaaatatgcttatcagtagatccaactagagacccggacaat
tcaccagatcgtgaatctccggcaactggaaatatcgtaggaaacgtggaatcgaaaact
atagagtttaatcatccggttaaagtcaagacaggtctgcagaaaaggacgcccggtttt
caagcgacactcatttgtttgacgacggcaccacctggagaacaacccgaaaatataacg
tccctcagcttaaattcctcatacggcctaatggcctatggaaacgagtcgggattagtg
atagtggacatcgtacagaagatctctttaattgtgctaaacaccagtgatcttggaagt
ggcgacccttatcaacgcgttttacgaagtcccaaacggcaggacgaattaaaacgagaa
aatgaagacaaggcaagaagtccaagtacagaccagagccagcgagaatccgcgatggaa
tctgagccagtaattacaaggataacggattcgatccaacaagtacagcaacagcaacag
tgtcctcgtactgagagtcagactggaaatagtagcgataaatcgagcgcggaggaaacc
acaaacgaatccaataaagcgggtaacattcctaacggcgacgagtgccagaaaagccaa
ggttggaaaggatttagtctcaagagacaactaagcaaagttgatctgaagatcaaaaat
acttttacaccgtcctcggtgtcttctcagaatggggtacttagctcgtcatcggggctc
atgcaagtaccccaatgccagcagataggcagcgatgctggcaatcaaaagtcttccacg
ttttactgcaatatcaacgaagcagccagtacgagtcgttcgctatccccagtcgaaagt
gttgactctgagtcctcgctgtcaccggagagccagtctccaggacacgagagtcctcag
accgatgacaggaggcgagagatccaaggggctagaagcccaacggaaagcgagagcgag
aaaacgataacgagccatgacaatattgccggcaagaccgaggcggtaagaccgatgaat
ctgtctttgcccgagcacgaggcgaaaccgccgagattgagatatatcgccaagatcaaa
caagctaagagagagggccgcttgctctcggtaccgaatctgaaattttccaagaacgag
ccgactgtttgtgacctaagatgcgatgagagcggtacctccgaatcgttcaccggcaat
cttataagaagattcaataaatttgatggctcttttcaacgatcaaggagctcgagtatg
tcgtctctcgaaaacatcaccacagaaaccataagctgccttacatttgcggattcttat
acgaaaaaaaatgatacaaacggcatgccgacgttatggattggcacgtctctgggatct
gtacagactgttatatttaatacgcctccccacagcgaacgtcatgctcacccagtggtt
gtgtctacttgtaatggatctaccttcaaactcaaaggttgtatcctatcgatgtcgttc
ttagattgcaacggcgctctgatcccgtattcgtacgagtcttggaaagacgagagtacg
gacggcaaagaacggaacaagagtcaagggaaatgtacaaatagccgaatgtcgccatcg
acgaacacgcaagtcagcggagacaatttcgaggacagacaattcgtcgtgctcgcgtca
gagaaacaggcgcgagttgtagcgttaccctcccaaaactgtgtatataggcaacagctg
gcagacagtcatattgtaattaaggcagaagttacatcattgaaagataacgtctgcctg
gtatgttacgtttcaaatggtcacatcacaacgtacagtctgcccagcctgagacccttg
atagacgtcgattttgtacctcttatagatttgagttttcagactacaaaacacggcatt
gtagaccccatgttgagcatatggggtcatcaactctttgttaatggcgataccgatcaa
atcgcaaagacgctttgcttcagtaatcgaggccacggcttgtatctatcgtcaccgatg
gaaatacataagttctccatttcgagtgaattctgcggtgaattgacggagatgatgggt
gatttgtttattggccacgacatgccagaaccgcctaaagagggattcttcaaaggttta
tttggtggtggttcgaggagtcttgaccgagaagagttgttcggggaatccagcggtcgt
gcgtcgcgcacagtggcgaaacatattccaggaccaaacgaagctctccgagagcgggtc
tctagcgcaacaggcgaggtaaatatagcataccaggcggtcatggagcgcggcgataag
ctgtcgcagcttgaagaacggaccgcgcgcatgatgtcggaggccgagaacttttcgacg
agcgctcacggactgatgctcaagtacaaagacaagaaatggtaccagctatga
DBGET
integrated database retrieval system
