Cardiocondyla obscurior: 139107915
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Entry
139107915 CDS
T10704
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139107915 (Gapvd1)
Membrane trafficking [BR:
cobs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139107915 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
139107915
NCBI-ProteinID:
XP_070521931
LinkDB
All DBs
Position
LG01:complement(7969052..7976910)
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AA seq
1527 aa
AA seq
DB search
MSSINSIDSHGTLQWDMMELARHLRQERLFVNSEQQNLQTLNERVLYVSSQLAQQAWITA
QQRVNLNRLIVARPDCTPASCCLRANALENSHFIDAYKYLRYQACLSYGEFLGALRKSPK
LLASCLVEGDKVIPESMQTIVQCLAAGLYGSCILPEDKSLVLQLLRHLMLLQIIPSDNPR
RLLRHGTCAFSRFYSIFHESLFSAKLFLTAALHSPIVQLLMEDEMFLDIDPDKAPIRFPP
AERLKKFGKEGTPEYQAKLQRYRLWTVNSLYRITQRFIVNIRETIHCFPMSVCWLVRQMA
GLLSKNGNVDPKEVHAMCTDLVFTYFICPAIVNPEPYGITDAPISYVARFNLMQVGQILQ
MLSLQKYQSIDNKVIDLYKKFEKDSVSSIIDSMLDGATEELEEEPTIIDNNKFQGLSRSA
ALFTESELNSLITFLNTIVGDNGGETVSHNSFDRKQLAEMLSQLPSGSLHNNRLSNEYLD
TPSKRGVAVGKGKGRGIRMTTFSPNVTNEGGEEVNGTAAPEEESLDKNFQDVLVIPFGPT
IGESVGLLSEQKVLCMELQSSMENGPVTLNLPDDAPDHPRQENSNGERIETQEKRTRFSL
SHDEVLFEGSIGNTSDNLEAVSEAASNHSVASSLELETEDQNDNLSDMVSANVSGRGTPN
ISGRDTPSSQITEGDDGRAAGEVRQLDLPPPNIPTKQSRSEIDDKFCKFEIKKLIEGDET
VSMVSDTWSTDVLASDSEIVEQQDRILLAVPPEQVAPVLPTEPTPMLDISETASEAWSTD
VLASDSERLTEVDTDDTASVARSDDTARSEVEIESRADSEGNEETLQSATPCPDGSSINF
SSISGTRDDTGIGTSIIHPSPTTSPLPSSSNVTGRGGTSSDYRRSTMEYVDKNANNISNV
DYGKSLRDDRLVHLIDKLQIDNGKQVERQAPAHNHIAAAAVAPALLLANHISAPVLPEKF
QNGDAKTEELDSCITSVGDTIGRLSTASLTSSSSSGSEPRVKNNISTSDLPTPTVNGTCD
SVDGTIPNFCKPNASTGAIPKSISFDMTAERGDKEMLDDDQKNKRGFFGKLKLSLRNRRG
KAIRGTDDRCFDREAGGDGVDICRHRLRRIMSEDVTSSGNIAGDTTDDILAKYRRKPSAA
SDTASVESNQSRTKEVEDERLSIDPNNVELSYAFADAKRKLRMVLSTADLQHIPWNTSER
HRWSQKENELVAFLQLQLAEAINLQDRALIAHLHETLRCVRLFNDDGCRKLFKSLREDYQ
KRSPYIAYLIRCRQGLLSTLAHLDRLCVRVKCDRDAINNHLVSVCVRVFLEKRETFLLRF
CDEFKKLTLADEKQDLVDNFLGKVHAEMDNDPIWQSASTNQLDLARVVVERTVMARVYHN
ALYPNGDGDVYRDQLLHDHIKKLAKVVTPNHKDLRIPKVYHYECPWPWAQAELAVISAYK
TPRDKLQCVFRCATTIMNLLSMASERGIPAADDLIPVLVYVIIKTNPPSLLSTVQYVDSF
YGNRLEGEEQYWWTQFCSAIEFIKTMD
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaattaacagtattgactcccacgggacactacagtgggacatgatggaactg
gcccgtcacttgcggcaggaaagactgttcgtcaattccgagcagcaaaacctgcagact
cttaacgaacgagtcttgtacgtctcgtcgcagttagcgcagcaagcgtggataactgct
caacagagggtcaatctgaatcgcttgatagtggcgaggccagattgcactccggcgtcg
tgttgcttgagagcaaacgcattggagaactcgcattttatcgacgcgtacaaatatctg
cgctaccaggcgtgcctgtcttacggggaattcttgggtgcgctacgaaagtcgcctaaa
ctcttagcctcgtgcctggtggaaggcgacaaagtcattccagaatcgatgcagactatt
gtgcaatgcttggctgccggattatacggcagctgtatattgccggaggacaagagcttg
gttcttcagctgctgaggcacctcatgctgctgcagattattccgtctgataacccacga
agattgctcaggcatggcacatgcgcgttttctagattttattcgatctttcacgaaagc
ctgttttctgcgaagctcttcttaacggcagctttgcacagccctatagtgcaattactc
atggaggacgaaatgtttctggacatagatccggacaaagcgcctattagattcccacct
gcggagagattgaagaaattcgggaaggaaggcacgcctgaataccaagcgaagttacag
cgttacagactgtggacagttaattctctgtatcgcataacgcagagattcatcgtcaac
attcgcgaaacaattcactgctttcctatgagtgtctgctggcttgtaaggcaaatggca
ggacttctcagcaagaacggaaatgtagatccaaaagaagtgcacgcaatgtgcaccgat
cttgtatttacttactttatttgccccgctatagttaatcccgagccttacggcattacg
gatgcgccgataagttatgtcgcgaggtttaatttaatgcaagtcgggcaaatcttacaa
atgctttcgttgcaaaagtatcaaagtatcgacaacaaagttattgatctttacaaaaaa
tttgagaaagattcagtgtcttctataatagactcgatgttggacggcgcgactgaggaa
cttgaagaggaaccaacgataattgacaataataaatttcaaggcctgtcacgatccgca
gcgttgtttacggaaagtgagctaaactccttaattacgtttttgaacacgattgttggt
gataacggtggagaaacagtatcacataattcgtttgatagaaaacaattagcagaaatg
ctgtcgcaattaccttcgggttcgttgcataataatagactaagtaacgaatatttggac
acacccagcaaacgaggcgtcgctgtaggaaaaggaaaaggacgtggtattagaatgacc
acattttcaccaaatgtaacaaacgaaggcggagaagaagttaacggtactgctgctcct
gaagaggaatcgttggataaaaattttcaagacgtgctagtcataccttttggtccgaca
attggagaatctgtagggctactcagtgaacaaaaggttttatgcatggagcttcaaagt
agtatggaaaatggacctgttactttgaatctccctgatgacgcccctgatcatcctaga
caagaaaatagcaacggtgaacgcatcgaaacgcaggagaagaggacccgattttcgtta
tcgcatgacgaagtattgttcgaaggatcaattgggaatacgtccgataatttagaagct
gtatcagaagctgcttccaatcacagtgtcgcttcatctttggagttagagacagaagat
caaaacgataatctctcagatatggtatccgccaatgtgtcgggtagaggaacccctaat
atatcaggtcgagatacaccatcatctcaaattactgaaggagacgacggacgcgctgca
ggtgaagtaaggcaattggatttgccgccgcctaatattccaaccaaacaaagccgatcg
gaaattgatgataaattttgcaaatttgagattaagaagctcattgaaggagatgaaact
gtttctatggtatctgatacttggtctacggatgtgctggcctccgatagcgaaatagtt
gaacaacaggatcgaatattgcttgctgttcctcctgaacaagttgcacctgttcttcct
accgaacctacgcccatgttagatattagcgaaaccgcttctgaagcctggagcacagat
gtattagctagtgattctgaaagattaactgaagtagataccgatgacactgctagcgtt
gccagatctgacgatactgctagatccgaggttgaaatagaaagtcgcgcagattccgag
ggaaatgaagaaactctccaatctgcaactccatgtccggatggttcaagcattaatttt
tcatcgatttcgggaactcgggatgatactggtataggaacttcgataattcatccatca
ccaacaacatctccattgccatcgtcttcaaatgtaacaggtcgtggcggaacctcgtcc
gattatcgacgaagtacaatggaatatgtagacaaaaacgctaacaatataagtaacgtg
gattacggtaaatctttacgggacgatcggctggttcacttgatagataaacttcaaatt
gacaatggtaagcaagttgaacgtcaagcacctgcgcacaatcacatcgccgcggctgca
gtcgcaccggcattgttattagctaatcatatttctgcgcctgttttgccagaaaagttc
caaaacggtgacgcgaaaacggaggaactggatagctgtataacatcagttggagatacg
atcggccgattaagcacggccagcttgacatcaagcagcagttccggatcggagcctcgt
gtgaaaaataatatttcaacctcagatttaccaacgccaacagttaatggtacttgcgat
tcagtagatggtacaattcccaatttttgcaaaccaaacgcatcaacaggagctattcca
aaaagcataagctttgacatgactgccgaacgcggtgataaagaaatgttggacgacgat
caaaaaaacaaacgtggtttcttcggtaaattaaaattgtcattgcgaaatcgcagaggt
aaagcaatccgcggaacggatgatagatgctttgaccgagaagccggtggtgatggcgtt
gacatatgccgacacagattacgcaggattatgtccgaggatgtaacatcatccggtaac
attgcaggcgacaccaccgatgacatattagcaaaatatcgaagaaaaccgagcgcagct
agcgacacagcttcggtcgaaagcaatcaatctcgtacaaaagaggtagaagacgaaaga
ctctcaatcgatcctaataatgtagagttatcttatgctttcgccgatgctaaaaggaaa
ttgcgtatggtgcttagcactgcagaccttcaacacattccatggaatacttcagagaga
catcgttggtcgcaaaaggaaaacgaactagttgcatttttgcaactacaactagcagaa
gctataaatctgcaggatagggcactgattgctcatcttcacgaaactttacgttgcgtg
cgactattcaatgacgatggatgtagaaaacttttcaaatcccttcgagaagattatcaa
aagcgatctccctatatcgcatatttaatcagatgtcgtcaaggattactgtcgacttta
gctcatttagatagattatgtgtacgggttaagtgcgatcgagatgctatcaataatcat
ctcgtatctgtttgcgtaagagtatttttggaaaaaagagagacttttcttttacgtttc
tgcgatgaatttaaaaagctcacgttggctgacgaaaaacaggatctcgtggataatttt
ctagggaaggttcacgctgaaatggacaatgatccgatttggcaatcggcgagcaccaac
cagctagatttggcgagagtcgtggtggaaagaaccgttatggcacgggtgtaccacaat
gcgctttatccaaatggagatggagatgtatatagggaccagcttcttcacgatcacatc
aaaaagttggcgaaggtcgtaactccaaatcacaaagacctacgcattccaaaggtttat
cattacgaatgcccctggccatgggcgcaggctgaattggctgtgatatcggcgtacaag
actcctagggataagttgcagtgtgtatttcgttgcgcgactaccatcatgaatctcctc
tccatggcgtcggaaagaggcatacctgctgccgacgatctgattcccgtgctggtttac
gtcataatcaagactaatccgccgtcgttgctatcaactgttcaatatgtagacagcttt
tatgggaatcggttagagggtgaggaacaatattggtggacgcagttttgctccgcaatc
gagtttattaaaacaatggattaa
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integrated database retrieval system
