Cardiocondyla obscurior: 139108140
Help
Entry
139108140 CDS
T10704
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04148
Efferocytosis
Brite
Membrane trafficking [BR:
cobs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139108140 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139108140
NCBI-ProteinID:
XP_070522314
LinkDB
All DBs
Position
LG14:complement(3687555..3693926)
Genome browser
AA seq
1300 aa
AA seq
DB search
MAENEFVSDSDECLVTEAINLDIEELDDTEYAIPIVEELPTLESILLEPDCESLSETEDD
VGIPLGEKLGSSETTSVGSHLSLNSLNKSSKTAQRPSSGVILRHVILKGITSQIISANER
VNAGLASAVAAGGNMLVIGTSHGLILGFDSSQTLRWCEQEVRHQGSISALCFNYDGSRVL
AGFVRGDILMLDSSNGKVLRILTDHHPLDTAVLHVKFTDSPKIALCSDSSGSVFELNFTR
VMGMRGCDSRCLFSGSKGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIVVCIRPRMR
VVLSHPLTGSAIAPPQLSWQLVVIQTADGSRVIDPVLALARDNLVYFYQVYTEIGTRVKL
SPLRRITLPYMISNMRWLNSRSLVILDAQEKLHLLDVRTQDNLETLDMSRVGISYASSHF
KGLSTGGNVSKAMALAGERACYNTVVVFGSQLLLLGTKSLHMICMRTWTERLQHLIVQKR
FQEALALGLSFYQDKGKAVIGLRGSKQRRKEIAREKVCEVLVQYMDELNQCLVNENIDYD
TIVLTCVDYCIQLENLDLLFGKLWDIVFESEGLKTSYLHALEAPLLDGSLQPRLPPLIAQ
QLVTLYDQEDKIDSLEAIVVLLNVDCLDIHQVTTICRQRGLWEALIYLQTTALGDFTAPI
HQLVPVLQNLLQDSIAALSRDCIKLGNAILVYTSCCLAGRGFPKDELPEGMPQKAKADIL
RALLSQHSSLANDLERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTSEMGLRHRQRLIDI
LLSIVMPSTPLTPKNIDYITTEQQFMVLIFVAKEVSENTVTLESNTLNRVIDILCIDSHV
ELSKDFKTERESSVLGLLHSKKLCNISDNTLLNLANRANFVRVAELLYSAREDWVAVCKC
MILEPMRHHDIWPWLENLPTTSLNKVISTHTSTLVTINASQFATIVATRLQKKIDTILQD
FIDNVNLEYKLLGALYQVAQYKEEDITLELTTEHLERYLALMCELEPARVVRHLHGPHGC
RLDEALRIVKKWKCKDAEAVMLEKLGNYQDAFDLLLKEFQDRLEMYRQAAASESETVHAA
LQLAGVCRRSAGNLDWMPLVEVMFRSHSENNRQKVDALNGKLLRLILESLSGTSILSNIL
EQILRNPSTTSGTMGDIRQLLSGVLTQSRYEQTLVETTARLVSLELHKALEKSLRDAGRA
CGNVSVTCPICRQPLSHCSDHVVVFSCGHGYHSTCLGEAKSCYKCLNTKGWAPIATNATQ
TVPQPPPRKKQLLPPEFLRHKDLALRLAPSCSIPDLEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaatgaatttgtatccgacagtgacgaatgtctcgttacggaggctattaat
ttagatatcgaagagttagatgacacggaatatgccataccaattgtggaagaattaccc
accttagaaagcatattgttggagcctgattgtgagtcactgtcagaaacggaggacgat
gtcggtataccattgggagaaaagcttggcagtagtgagacaaccagtgtcggtagtcat
ctgtcattaaactccttaaataaatcctccaagaccgctcagagaccgtcctcgggcgtt
atcttaaggcacgtcatactcaaaggaataacatcgcaaattatttcggccaatgagagg
gtcaatgctggcttggctagtgcagttgcagctggggggaatatgctggtaattggtacc
agtcacggtttaattttgggctttgattcgtcgcaaactttgcgatggtgtgagcaggaa
gtaagacatcaaggttctatctcggctctttgctttaattatgacggtagtcgagtattg
gctggttttgttagaggcgatatcttgatgttggatagcagtaatggaaaggttttaagg
attcttacagatcatcatccactcgacactgctgtgttacatgttaaatttacagattca
ccaaaaatagctttgtgcagcgatagtagcggctcggtattcgaattgaattttactaga
gtgatgggcatgcgaggctgtgacagtagatgcttgtttagtggctctaagggagaagtg
tgcactttagagcctttactgttgaatcacttgccgtcgcatccactgaaaaattataca
ttagtcgcaatggcgactttatcgaaggtaattgtagtttgcatacgaccgcgaatgcgc
gttgtattaagtcatccattaacaggttctgcaatagcaccaccgcaactgtcttggcaa
ttagttgttatacaaacggctgatggttctcgcgtaatcgatccagtattggcgcttgca
agagacaacttggtgtatttttatcaagtctatactgaaattggtactcgagtaaagtta
tctcctcttcgaagaataacgttaccgtatatgataagcaatatgaggtggttaaattca
agatctcttgtaatattagatgctcaagagaaattgcatttgttagacgtaaggacgcaa
gataatttagagacgttggacatgagtcgcgttggtatttcttacgcttctagtcatttt
aaaggattatctaccggcggaaatgtttccaaggcgatggcgttagccggtgagcgagcg
tgctacaacactgttgttgttttcggttcgcagttattgttattaggtacaaagagttta
catatgatatgtatgagaacgtggactgaaagattgcaacatttaatcgtgcagaaacgt
tttcaggaggcattagcactaggcctttctttttatcaggataaaggtaaagcggttata
ggcctacgaggttctaagcaacgtcgcaaggaaatagcgcgtgaaaaagtttgcgaggta
ttagtgcaatatatggacgaattaaatcagtgtttagtgaacgaaaatatagactatgat
acgatagtactcacttgtgtcgattactgtatacaactggaaaatttagatttgttattc
ggaaagttgtgggacatagtctttgagtctgaaggactgaaaactagttacttgcacgct
ctcgaggctcctctactagatggaagtcttcaaccgagattgccaccgttgatcgcacaa
caattagttactctttacgaccaagaagacaaaatagattcgttagaagcgatcgtggtt
ctcctcaatgtagattgcttagatattcatcaagtaacgacaatttgtcgtcagcgcggt
ctttgggaggcactgatttatctacagacgacagcgctgggtgattttacagcacccatt
catcaattggtaccggtattacaaaatttattacaggactcgatagccgctctttcccga
gactgtataaaacttggcaacgccattctagtttatactagctgctgtctcgctggtcgc
ggattcccgaaggatgaacttcccgagggcatgccgcaaaaagcgaaagcggacatatta
agagccttgttatctcagcattccagtttggcgaatgatttggagaggcaatatccgtac
ctgagaacgttattgcaattcgatgcgaagggcttcctcgatgttatagccatcgctttc
caggagccagaatttacttccgaaatgggtttgcggcacagacagaggctcatagatatt
ttattgagtattgttatgcctagtacgccacttactccaaaaaatattgattacatcacg
acagagcaacaatttatggttctcatattcgttgcaaaggaagtgtccgaaaatactgtt
accctagagtctaatacgttgaatagagtgatagatatattgtgcatcgactcgcacgta
gaactgtcaaaggattttaagactgaaagagaaagttctgtgttgggattgttgcattct
aaaaagctgtgtaatatttcagataacactttattaaatttagcaaatagagcaaatttc
gtaagagttgcagaattattgtacagtgcgcgagaagattgggtggcagtatgtaaatgc
atgatcttggagccaatgaggcatcatgatatatggccatggctcgaaaatttaccgacc
acctcgttaaacaaagttatatcgactcacacatcaactctcgtgacgatcaacgcaagt
caatttgctacgatcgtcgcgacccggctgcaaaaaaagatcgacacaatattacaagat
tttatcgataatgtgaatttggaatataaattattaggagcgttatatcaagtcgcacag
tacaaagaggaagacattactttggaattgacaactgaacacttggaaagatatttagcg
ctaatgtgtgaattggaaccggcgcgtgtagttcgtcatttacatggaccgcatggatgc
agattagacgaggcattaaggatcgttaaaaaatggaagtgcaaagatgcggaggcggta
atgctagaaaaattgggtaattaccaagacgcgttcgatcttttactgaaagagtttcag
gatcgattggaaatgtatcggcaggctgcagcttcggaaagcgaaacggtacacgccgct
cttcaacttgcgggagtatgtcgaagatcagcgggaaatctcgattggatgcccctcgta
gaagttatgtttcgatcacattcggagaataataggcagaaagtggatgcattgaatggt
aaattattgagattaattttagaatctttgagtggtacgtcgatattgtcaaatatacta
gaacagattttgagaaatccctcgacaacaagtggaacgatgggtgatatacgacaattg
ctgtctggagttcttactcaatcgcgatacgaacaaaccttggtcgaaactaccgcacga
ttagtgagcttagaacttcacaaagctcttgaaaaatcattaagagatgctggtagagca
tgtggtaacgtttccgtaacttgtcctatatgtagacagccgttatcgcactgctccgat
cacgttgtagtgttcagttgcggtcatggatatcattctacgtgtcttggtgaagctaag
tcgtgctataaatgtttaaacacgaaaggatgggcacctatcgccaccaatgctacacaa
accgttcctcaacctccaccgagaaaaaaacagcttcttccgccagaattcctacgtcac
aaagatcttgcactaagattggcaccgtcctgctctatccccgaccttgaaggtatcttt
tga
DBGET
integrated database retrieval system
