Cardiocondyla obscurior: 139108317
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Entry
139108317 CDS
T10704
Symbol
Sima
Name
(RefSeq) uncharacterized protein Sima isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04137
Mitophagy - animal
cobs04140
Autophagy - animal
cobs04148
Efferocytosis
Brite
Transcription factors [BR:
cobs03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139108317 (Sima)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139108317
NCBI-ProteinID:
XP_070522575
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Position
LG15:complement(5210097..5242411)
Genome browser
AA seq
1494 aa
AA seq
DB search
MNARLHQVEAEERGDEAREEGGNIILGDGRQQRGRCSDLCDDWSGYAGVDVRDIVRGNEI
NFTSRELLKPPPAPSYGPAITFSNVNVLPGNIGAPSGSIASHAGDNTRSRACDIETTSCS
TMRFPYAGASCNVACSNAPATMCNVVGTGADYNGPEATWYRNDDGHLAESEPGICAANTA
SRACQFGPVDVEDLAKYFDLPTEGCKPPSAGNRTIYSKRSRYGQVTRMDRRDLNFCDPPP
CAPVSDDLTPPHLRACDMGPSTLGYCDPSYGDLRSRDLPYDSRFHGSRFCGMRVCEEQPH
EIARHHDLVRSDPGPNNWFCNVCPELFNFCTEERWLQCPASDRCPLYDTSYAYGASILPP
CIYENDNDYDNWPYAEDEQLLEDYLSNEKRKERSRDAARCRRSRETDIFTELAAALPITP
EQAAPLDKASVMRLAIAYLKVRAVVDSIPVSLAKSESSAKMDELFPKALNGFMLVLSSDG
NMVYLSENVGDYLGVSQMDMMGQSVYEYSHPCDHDELRKCLSLKYTNTNEKRAYSFFLRL
KCTLTSKGRKVNLKSASYKVIHCTGRLTYIRDSNSNSMEVDREERRKDDEDAIQDTGASL
VLVGSPIPHPSNIEIPLGRHTFLSKHCLSMKFTYADEKLAEYLGWSSEELMGRSIFEFYH
ALDNLALEKCFKCLFSKGQCETLAYRFLGKRGGYAWVVTQATLIHCSKQQKPISVVCVNY
ILSGIEHEDEVYSVRQLAARDSGADLVKIERPLPVPVPAGGGASTTDSSQVSLNNEKETL
AEKAVVDDESRDDDRPFAVTASIFRPADQKSGCKDDPPKDPALPKKKLFAQEEKAFVQAL
KESLEESIKESLKENDQPNCRQSLAKKTPVVFQDKPTVVRDSSFSAGHRDRPQSVTRQLF
APLATVVQQQQQQPQQEQQPQLSCRPQTATASIFAPRTEDMNKGFLTFSEDQPGLTMLKD
EPDDLTHLAPTAGDVCVPLEDTPFLSDMLDEFIFGNDHYSCPLLSPGDTLTPELRSTDLS
SSLKETDLVDSATRTKDSVDRLADSDPFMYGDSPGSPCIDPSTVSSSLSKYRQSPERSVD
SLGSPTGGSGGDGLSEDEMLMLGISDNIGDEELALRAPYIPMSDQDEALNLLINDDMVMW
GSSQSIDKGSSKWLFDDREQRNSDSSLAQLLRTDQAVSRRYNDHGGGLLNPTQILGQTFR
KSKNVVFESDRFSSNQERPNKRIHSGFNTDSETEYKRLKCEDLPFKRIELEDTLLTKQQR
LSTMLHKRSSTSLNNTCGSQLLRRLVSTQIPSIASQTTLPDGDNICGDGERCYEDISKQR
ARVLDDIIDFVETESDRGGGGGGGENRGSINNGLDKIDVTNRRRSSSCGTDGNSVLMNLL
VSGCDDPLMNSRNVPTLLSRNLTTPLSVNVDNQMVPHCDKTDVASLPDHLSPDTRKHLIG
SFTGGSSGGGDSNIVSPTTSAMVSFDGFDYDGSAGLLEVGPDLLENMLLDRSLV
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacgtttgcaccaagtggaagctgaagaacggggagatgaggcgagggaggag
ggtggaaacatcatccttggtgatggtcgtcagcagcggggtcgttgctccgatctgtgc
gacgactggtcgggttatgccggtgtcgacgtgcgtgacatagtaagaggaaacgagata
aatttcacgtcgcgcgaattgttgaagccccctccggcaccgtcttacggtccagcgatc
acatttagcaacgtcaacgttttacctggcaatatcggcgcaccctctggcagcattgcg
tcacacgcaggtgataatactagatcacgagcctgcgatatcgagacgacgtcttgctcg
acaatgagatttccgtatgccggtgcaagctgcaacgtcgcgtgtagtaacgcgccagcg
acaatgtgcaacgtcgttggaacgggtgccgattacaacggtccggaagcaacgtggtac
cgcaacgacgacggtcacctggccgaatcagaacccgggatttgtgcggcgaacaccgct
tcgagagcttgccagtttggcccggttgacgtcgaggatctcgccaagtatttcgatcta
ccaacggaggggtgcaagccgccctcggcgggcaatcgcaccatctactcgaagagatcg
cgatatggtcaggtcacgaggatggatcgtcgcgatttaaacttctgcgatccaccccct
tgcgctccagtatccgacgatctaacgcctccccatctacgggcttgcgatatgggtccg
agcactctgggatattgtgatccgagctacggcgatttacggtctcgcgatttgccgtac
gattcgcgcttccacggctcgcgattttgcggcatgagggtttgcgaggagcagccacac
gaaatcgcacggcaccacgatttggtacggagcgatccggggccgaacaattggttctgt
aacgtctgtccggaactgttcaatttctgcaccgaggaacggtggctgcagtgcccagcg
agcgatcgctgtcccctttacgacacctcgtacgcttacggtgcgagcatcttaccgccg
tgtatctatgagaacgataacgattacgataactggccctacgcggaggacgaacagctc
ctcgaggattacttaagtaatgagaagaggaaggaaaggtctcgcgatgcagctcgctgt
agacgtagcagagaaaccgatatcttcaccgaacttgcggccgcgcttccgatcacaccg
gaacaagcagcacccttagataaggctagtgtaatgaggctggcgattgcctacctcaaa
gttcgtgccgtcgtagattccattccagtttcgctggcaaaatccgagtcatctgcgaag
atggatgagctatttccaaaagctctcaacggctttatgttagtactctctagtgacggc
aatatggtctacctctcagaaaacgtcggagattacctcggagtgtcacaaatggacatg
atgggacaaagtgtatatgaatacagtcatccctgtgaccacgatgaattgcgcaagtgc
ctctccttgaaatacacaaatacgaatgaaaaacgtgcctacagcttcttcctgcgacta
aaatgtaccctcacgagcaaaggcagaaaagtcaatctaaagagcgcttcttacaaggtt
attcattgcactggcagattgacgtacattcgcgactcaaactcgaactctatggaagtt
gatagagaagaacgacgaaaagatgatgaagacgcgatacaagacacaggcgcttcttta
gtgctcgtgggtagccctatacctcaccccagtaatatcgagatacctttaggacgtcac
acgtttttgtcgaagcactgtctcagcatgaagtttacttacgccgatgagaaattggcc
gaatatttgggttggagcagcgaggaactgatgggtcgttcaattttcgaattttatcac
gcacttgacaacttggctctagagaagtgttttaaatgcctgttcagcaagggccagtgc
gagaccttggcgtacagatttctcggcaagcgaggtggatacgcctgggttgtcacccag
gccaccctgatccactgttcgaagcagcagaagccgatctccgtcgtctgcgtcaactac
attctaagtgggatcgagcacgaggatgaggtgtacagcgtacgtcagttggccgcgcgt
gacagcggcgccgatttggtgaagatagagagaccattgccggtcccggtaccggccggt
ggtggtgcgtcgacgacggactcgagccaggtatcgttgaacaacgagaaagagactctt
gcggagaaggcggtcgtcgacgacgaatccagagacgacgatcggccgttcgccgtgacc
gcatcgatcttccgaccggctgaccaaaagagcggctgcaaggacgatccaccgaaggac
cccgctttgccgaagaaaaagctcttcgcccaggaggaaaaggcattcgtgcaggctctt
aaggaatccctggaggagtccattaaagaatcactgaaggagaacgaccagccgaattgc
cggcagtcccttgctaagaaaacgcccgttgtctttcaggataaaccgacggtggtacgc
gattcttcgttcagtgctggacaccgcgatcgtccacagtcggtgacgaggcaactcttt
gcgccgctcgcaaccgttgtgcaacagcaacagcagcaaccacaacaagaacaacagccg
cagttatcctgccgaccacaaacggccacagcgagcattttcgcgcctcgcaccgaggac
atgaacaagggcttcttgactttcagcgaggatcagccgggtctcaccatgttgaaggac
gagccagatgacttgacacatctcgcacccacggctggcgacgtgtgcgtacctttggaa
gatactccctttctgtcggatatgctcgacgagtttattttcggcaacgatcactatagc
tgtcccttgctgagtccaggcgatactttaacgccagaattacgttccacggatctttcg
agctctctcaaggagacagatctggtggactctgctacgagaacgaaagattcggttgat
cgtctggctgacagcgatcctttcatgtacggcgattcacctggaagtccctgcatcgac
ccgagtaccgtgtcgtcgtccctctccaaatatcggcaaagtccggaacgtagtgtggat
tcattgggtagtccaacaggaggaagcggtggcgatggactctccgaagatgaaatgctt
atgttaggtatcagcgataatataggggatgaagaattggcacttagagcaccctatatt
ccgatgtcggaccaagacgaggctctaaatctgcttattaacgatgacatggttatgtgg
ggctcatcgcagtctatcgataaaggatcatcaaagtggttatttgacgatcgagagcaa
cgtaattctgattccagtctggctcaattgttacgaaccgatcaagcagtatcgcgacga
tataacgatcacggtggaggtttattaaatccaacacagatactggggcaaacattcagg
aaaagtaagaatgtagttttcgagtccgatcgattttcctctaatcaggaacgtcctaat
aaacgtattcactccggatttaatacggattcggagaccgagtacaagcgtcttaagtgt
gaagatttgcctttcaagcgtatagagctcgaagatactctattaacgaagcaacaacgg
ctatctacaatgcttcacaaaagatcatctacaagtctcaataatacttgcggcagccag
cttctgcggcgtcttgtctcgacgcagataccgagcattgcgtcgcagacaactttgccc
gacggcgataatatttgcggtgatggtgaacgttgctacgaggacatttcgaagcagcgt
gcccgcgttctcgacgacatcatcgactttgtcgaaacggaaagtgatcgcggtggggga
ggaggtggaggcgaaaatcgcggcagtatcaataacggcctagacaagatcgatgtgacg
aatcgaaggagaagttcttcttgcggtactgatggcaacagtgtactaatgaatctcctg
gtttccggctgcgacgatcctctgatgaattctcggaatgtgccaactttattatcgagg
aacttgacgaccccgttatctgtcaacgtagataatcagatggtaccgcattgcgataaa
acggacgttgcatccttgcctgatcaccttagtccagacaccaggaaacatttgatcggg
tctttcaccggcggcagcagcggaggtggagacagcaatattgtttcgcctacgacatcc
gcgatggtttcctttgatggtttcgactacgatggatccgcaggtttactcgaagtggga
ccagatctactcgaaaacatgctgttggatcgaagtctagtgtga
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integrated database retrieval system
