Cardiocondyla obscurior: 139108726
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Entry
139108726 CDS
T10704
Symbol
Tfiib
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139108726 (Tfiib)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139108726 (Tfiib)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
139108726 (Tfiib)
Prokaryotic type
Archaeal type
TFB
139108726 (Tfiib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
139108726
NCBI-ProteinID:
XP_070523346
LinkDB
All DBs
Position
LG02:7495719..7498532
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AA seq
315 aa
AA seq
DB search
MASSSRNAVNKVCCYAHPDALLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKSG
VDPSRVGGPENHLLNGADLSTMIGPGTGAASFDGFGTAKYQNRRTMSSSDRALVNAIREI
NGMADRINLPKTIVDRANTLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEIC
AVSKISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPNMVQRAATHIARKAVE
IDIVPGRSPISVAAAAIYMASQASDDKRSQKEIGDIAGVADVTIRQSYKLMYPHAIKLFP
EDFKFATPIDQLPQM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttcgtcacggaatgctgtgaacaaggtttgttgctatgcacatccagatgct
ctacttatagaagattatagagcaggagatcaaatttgttcagaatgtggattggttgta
ggggatagagtaatagatgtaggttctgaatggaggacatttagcaatgaaaaatcagga
gtggatccatcgcgtgttggtggaccagaaaatcaccttcttaatggtgcagacttatcg
acgatgattgggccaggaacaggtgctgcatcctttgatggctttggtactgcaaaatat
caaaatcggcgcactatgagcagttcagacagagctttggtcaatgcaattcgtgaaatt
aatggtatggcagatcgtattaatttaccaaaaaccattgtcgaccgagctaataccttg
ttcaagcaagtgcacgacggcaagaacctaaaaggccgtgcgaacgacgcaatcgcttcc
gcgtgtttatacattgcctgccgacaagagggtgtaccgcgtacatttaaagagatttgc
gcagtcagcaagataagcaagaaagagatcggtcgatgttttaaattaattcttaaagct
cttgaaactagcgtggatctcatcacaacgggtgatttcatgtccagattctgttctaat
ctcggccttcctaatatggtacaaagagccgcaacacatatcgctaggaaagcggttgag
attgatattgtacctggaagatcgcccatttctgttgctgctgcagcaatttatatggcc
tcacaggcgtcagacgacaagagatcgcaaaaggagattggagatatcgctggggttgca
gacgttacgatacgacagtcttataaattgatgtatccgcatgcaattaagcttttccca
gaagatttcaaatttgctacaccaattgatcagttaccacagatgtaa
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