Cardiocondyla obscurior: 139108786
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Entry
139108786 CDS
T10704
Symbol
Tho2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139108786 (Tho2)
09122 Translation
03013 Nucleocytoplasmic transport
139108786 (Tho2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139108786 (Tho2)
03041 Spliceosome [BR:
cobs03041
]
139108786 (Tho2)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139108786 (Tho2)
Spliceosome [BR:
cobs03041
]
Complex C
Other components
EJC/TREX
139108786 (Tho2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139108786 (Tho2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
139108786
NCBI-ProteinID:
XP_070523470
LinkDB
All DBs
AA seq
1427 aa
AA seq
DB search
MASKVWHTELWKSWDKHGKNDFLKLIKHKFKEGNTPEWRRGLYELISNGIHGNVKKDSVV
QTLGELTTFDNSIPSAVVDIFTLIDAEANNEERNNFYYIVKESEKFLTDRILKERLEIET
LQDVGTLKNKNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERPDNEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
VNTTPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIISDHEQVMKQAKEYVRKLSVIST
KDKEDVVEEKENTQDKYTSNQKFGLCEALLEIGAWEVAQSLFSRLPDYCLTDQRPIALAL
CKMIQSLIEPLYRKHCIVSPKLPGCKVPPLKSSLAPPSLNDLADIHDNLLPMLIVLGPNL
HQDPILMYKVMRLCHTAIKHCSLDASKQPLNKNCTLYYDVLSILDVALLPSLSFMDCNCC
VAEELWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKP
VGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGA
DRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIV
QKMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEQDLAVALC
LLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSM
LQDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAAQAVMAPV
AQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREVSKLKQLAAQTADSKDMN
VSKGKKEQERYTTLVEKLQDEKKKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQF
LQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEAN
RYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCH
KWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQ
RQDLHVLATSYSGQLKAKTPSMIRESDFHHVGDKTSKTQDATNSETSEKVSNGVAVKENN
GDARSEKENKEQREKRSSSNQTHHENSEKFRKKDDSKDVLEAKEKYITKKEEGKDEEGLE
KKDRKYYKEEHYYSSAVDNLDRDLSSVSNSSASSGPVQEGPERVSDTKRRKIETSTPKEG
RRAEAALDKKERSSKGKTRDEQKELRREKKQGRKRDRAEESIATTEQKRRKDDERAKGTH
QNGDIPEHREKHHYSKEKSPYAKDRPHEREGRESRDKHRRSSDPKRR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagtatggcatacagaattgtggaagtcatgggataagcatgggaaaaac
gatttcctcaagctaatcaagcacaaatttaaggaaggcaacacaccagaatggagacga
ggattatacgaattaatatcaaatggaatccatggaaatgtaaaaaaggacagtgtagtt
cagacattaggtgaacttacgacctttgataattccataccatctgcagtagtagacata
tttaccttaattgatgcagaagcaaataatgaggaaaggaataatttttattatattgtc
aaagaatctgaaaagtttttgaccgatagaatattgaaagaacgtttagaaattgaaact
ttacaagatgtagggacattaaaaaacaaaaattttcaaaccaaatttataaaagtaaaa
acaaagttatattataaacaaaggaaatttaatttatttcgtgaagagagcgagggttat
tccaagctcattgtagaattgaatcaagagcgtccagacaatgaagtggcatcaacattg
gaaattgttaagtctcttatcggttattttaatcttgatcctaatagagtactcgacatc
ttattagaaacttttgaaaatagaccgcaagatgatgctctatttattcctttaatacga
tcgtacatgagtgatcagcaggtactttgcgaagtgttaggattcaaatactgctccact
gtgaacaccacgccgttctcgctgcaaaaagtcaccgcactcatgctgcagcacggtgtg
attaaattagatgatatattaccttggttagtgccagatgataaaactatcatatcagat
catgaacaggtgatgaagcaagccaaggaatatgtacggaaactaagcgtgatctcaacg
aaagacaaagaagatgttgtcgaagaaaaggaaaatacacaagacaagtacacaagtaat
caaaaatttggattatgtgaagcgttactggaaattggagcttgggaagtagcacaaagt
ttattcagtcgcttgccagattattgtcttacagatcaacgtcccatagctctagcatta
tgcaaaatgattcaatctcttattgaaccattatatagaaaacactgtattgtttcccca
aaattgccaggctgtaaagtacctccgttgaaaagttctctcgcgccgccatcgttaaac
gatctggcagatattcatgacaatttgttaccaatgctgatcgtattaggtccgaatctg
catcaagatcccattttaatgtacaaagtgatgcgattatgtcataccgctatcaaacat
tgttcacttgatgcgagcaagcaaccattgaacaaaaattgcactctatattatgatgta
ttgtcgatacttgatgtcgcgctattaccatctctttccttcatggattgcaattgttgt
gttgccgaggaattatggaacattctaaaatactatccctatcagaatcgatattgccta
tatgcacgttggaaaaatgatacgccattacaacacgccgcattgctgcggaaacgtgca
gatgcccaaaaaaagattaaatcaattatgaagcgcgtgagcaaggaaacaattaagccg
gtcggccgatcaataggcaagcttacgcattcctcaccgggtgtattattcgattatgtc
cttatacagatccagttatatgataacttgatagggcctgtagtggactccttaaaatat
ttgacaaatatctcgtacgatgtattaggatattgtcttgtagaagcattagcgggtgct
gacagagatagatttaaacacgatggcacgagtatatctttgtggctgcaatctctggct
tctttttgcggagcgatatttaaaaaatataacatcgaattaacagggttgctacaatac
gtagcaaatcaacttaaagctcaaaagagcctagatctattaatattaaaagaaatagta
caaaaaatggctggtattgaagcagccgaagaaatgacgtctgatcaattggatgctatg
gcaggtggagatctgttaaaaaatgaggccggttactttagtcaagttcgcaacacaaaa
aaatcatcacagcgtttgaaggaagctctcgctgaacaggatctcgcggttgctttgtgc
ttattgatggcacagcaaaagcattgcgttgtttatagagaaacagataaatctcattta
aaactcgttggcaagttatacgatcagtgtcaggatactctggtacaattcgggactttt
ctgggttcgactatgacagtagacgagtatgtggagcgactaccctcaattcattctatg
ctccaggacaatcacatacatgcagacgttgcattttttctggcacggccaatgtttgcg
catgccataaatataaaatatgacgcccttcgcaaagcagatccaaattataagaaaatg
tctacggctatgaagcaattaaaatacgcggaagccgcgcaagctgttatggcacctgtc
gctcagtcagttagaccattgcaccctctaaaagtttgggaggacatatcaccgcagttc
ttagttacgttttggtctttatcgatgtacgatttgtacgtgccagtggaaagctatcaa
agagaagttagcaaattaaaacaacttgccgcgcaaacagccgattccaaagacatgaat
gtaagtaaaggaaaaaaggaacaagaaaggtatactactcttgtcgagaagctacaagat
gaaaagaaaaagcaagaagaacacgttgaaaaagtttttgcgtacctgagacaagaaaaa
gatacatggtttttatcacgaagcgctaaatctgcaaaaaatgagacgataacgcaattt
ctacagttgtgcctatttccgcgatgtacattcacaactgtggacgctatgtactgtgca
aaatttgtacacaccattcactctttgaagactgcaaatttttcaactttactttgctat
gatcgtctcttctgtgatattacgtattctgtcacttcgtgcacagagaatgaagcaaat
cgatatggtagatttttatgcgccatgcttgaaactgtgatgagatggcattctgagaaa
gccatatttgataaggaatgcagtaattatcccggcttcgtgaccaaattccgtgtgagc
aatcaattttctgaagcaaatgatatggtcggatttgagaattatagacacgtttgtcat
aaatggcactataaaatcacaaaggctattgtagtgtgtttagattctaaggattatgtg
caaatacgcaattctttaataatattaattaagatattgccacattttcctgtcttggca
aaactctcgcagatacttgaacgaaaagtagaaaaagtaagagaggaggagcgtggtcaa
cgccaagatttacacgttttggctacatcatacagcggacaactaaaagctaaaactccc
agtatgatacgcgaatcggactttcaccatgtaggtgataagacaagtaagacacaagac
gcaacaaatagtgaaacgagcgaaaaagttagtaatggagtagcagtaaaagaaaataat
ggagatgctcgatcagaaaaagaaaataaagagcaacgagaaaaacgaagttcctctaat
caaacacatcacgaaaattccgagaagtttagaaaaaaagatgacagcaaagatgtttta
gaagcaaaagagaaatacataacaaaaaaagaagaagggaaagacgaagagggattagag
aaaaaagatcgaaaatattataaggaagagcactactatagcagtgcagtagacaatttg
gatcgcgatctttccagtgtatcaaatagtagtgccagctccggtcccgtacaagaaggt
cctgaaagagtttcagatacaaaaagaagaaaaatagaaactagcactccaaaggaagga
agacgcgcggaagccgctcttgacaagaaagaacgatccagtaaagggaagacacgcgac
gaacagaaagaactgcgtagagaaaagaaacaaggacgaaaaagggatcgagcagaagaa
tctatagcgaccactgaacaaaagcgaagaaaagacgacgaaagagctaagggcacgcat
cagaacggtgacattccggaacatagagaaaaacatcattacagtaaggaaaaatctccg
tacgcgaaggatcgtcctcatgaacgcgaaggccgcgaaagccgtgataaacatagaagg
agttcagacccgaagcggagatga
DBGET
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