Cardiocondyla obscurior: 139108987
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Entry
139108987 CDS
T10704
Symbol
Smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139108987 (Smc6)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
139108987 (Smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_29
ATG16
SMC_hinge
RsgA_GTPase
AAA_15
ABC_tran_CTD
CENP-F_leu_zip
DUF7121
Laminin_II
CC_Liprin_beta
HAUS-augmin3
zf-C4H2
Fez1
DUF1664
BRE1
ABC_tran
EzrA
CCDC39
Motif
Other DBs
NCBI-GeneID:
139108987
NCBI-ProteinID:
XP_070523818
LinkDB
All DBs
Position
LG16:complement(1000344..1006346)
Genome browser
AA seq
1073 aa
AA seq
DB search
MENDTRTRRRKATTKDADDYQAKRSRIEVDDDTEQEQENIAGKVEKIRLYNFMCHNALEI
KLNKNVNFIVGRNGSGKSAILTALTVGLGARANVTSRGSSVKEFIKKGKHTAIIEITLLN
KGDTAYKTDIYGDKITVIRTIGTSSTYKIKNSRGEIISTRRDELDNIITTMNIQVDNPIS
VLNQDVSRTFLVTSKPDEKYNLFMKATLLDAIENNYKEALNICEEEYNKLKQYSATLSQV
KGEIQKLKDSVHRLEEVDVSRKELASLEMELQWAIAITEETKLHNMQETLQMHEKKCKEL
ENVELSIGTKDEEIDAKIIDLKKKIQKAEQEVTDSIEAYNSAKQKYSSTNDAFFNKQREW
RSATSKIKRLEDDIDLLKKEIQKLEGYNDEEHNTRKEMTERLSKLEEKLDELDASLRTKQ
TEVMHLEADKMRLMQKVQFTKNEIDNFNRQINKIRSELKAVEQQSDNAFSVFGSNIPRLL
KRIDEEYKKKRFKEKPRGPIGAFIKMKNAAWAPAVESFLGFRTLSSFCVDNSQDAKLLNS
IMKEIFYHENPPQIMCSKFFNQIHDVRRYCTQSSQYSNLLDAMVIEDPVVANCLIDQREV
ECILLIPTSEEACTIMSDVTKVPKNCKRAFTLVCDMFYPDPNYRTYGGKCGTRAKYLQVS
TMQAMQRLKEELQIAESKKQETMSVYNSVCERVNRTSSELNNVTASLSKLRSAQSECNNL
INELKDKIESNEATSADVFRNEAAELEKKLAQERAAENLLSENVQELKKNVESLNEEVNR
CRNLRQNLHTVIDPLKDQIREFAQEKERHRSECQRATQRLQSIRQAIQYSKGELEIQERA
AKKAISNATEKCSRINSARSVNQIKSLLVDLRDKIREIENQFGCVDELRQQLKEKEQKYG
VNIELTALLKQSCEKHIERVKYRQNIFLQLRDMYSVAVQKSFMDVLSLRHYKGSVEIDHV
NKMLDLHVSPRQDKNSGNDTKSLSGGERSYSTVAFILALWDCIQLPFYFLDEFDVFMDKV
NRRVIMDILLDHSRLHPQSQFTFLTPLDTSHILAEDYVTIHQLQPPERRVLSQ
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgacacgagaacacgacgaaggaaggcgacgacgaaagacgccgacgactat
caggccaaacgatccagaattgaggttgacgacgacaccgagcaggaacaagagaatata
gctgggaaagtagagaaaattcgtctttataattttatgtgtcacaatgcattggagata
aagttaaataaaaatgttaactttattgtgggacgcaatggcagtggcaagagtgccata
ttaactgcattaactgtaggacttggtgctagagctaatgttaccagcaggggaagctct
gtcaaagaattcataaagaagggaaaacatacagctattattgagataacattattaaac
aaaggagataccgcttataaaactgatatttatggtgataaaattacagttatacgtaca
attggaactagctcaacatataaaataaaaaatagcagaggagaaattatttcaacaagg
cgtgacgaattggacaatattataactacaatgaatatacaagttgataacccaatatct
gttttaaatcaggatgtttcaagaacattcttagttacctcaaaacctgatgaaaaatat
aatttatttatgaaagctacactcttagatgccattgaaaataattataaggaagctctc
aatatatgcgaagaggaatataataaattaaaacaatattctgcgaccttgtcacaagta
aaaggagagatacaaaaattgaaggacagtgtacacagattagaagaagtagatgtctcc
cgaaaagaattagcaagtcttgaaatggaacttcagtgggctatagcgattacggaagaa
actaaacttcataacatgcaggaaaccttacaaatgcacgaaaaaaaatgtaaagaactt
gaaaatgtggaattatctattggaacaaaagatgaagaaattgatgcaaaaattatagat
ttgaagaagaaaattcagaaagcagagcaagaagtaacagatagcattgaagcttataat
agcgcaaaacaaaaatattcaagtacgaatgatgcattcttcaataagcaacgtgagtgg
cgttctgctacaagtaaaataaaacgattagaagacgatattgatttgctcaaaaaagaa
attcaaaagcttgaaggttacaacgatgaagaacataatacgagaaaagaaatgacagaa
cgcttgtccaagttagaggaaaaactagatgaactcgatgcttcattacgtactaagcaa
accgaagtaatgcatttagaggccgataaaatgcgacttatgcagaaagtacaatttacc
aaaaatgaaatagataattttaacagacaaataaataagattagaagtgagttgaaagca
gttgaacagcaatcggataatgcatttagtgtatttggatcaaacataccacgtctgttg
aaaagaatcgatgaagaatataagaaaaagcgatttaaagaaaaaccacgcggtcctatt
ggagcatttataaaaatgaaaaacgcagcctgggcaccagcagtagagagttttctcggt
tttcgtaccctcagttcattctgtgtggataacagtcaagatgctaagttgctaaacagc
atcatgaaggaaattttctatcacgaaaaccctccccagataatgtgtagtaaatttttt
aatcagatacatgatgttagacgctactgtacacagtcatcgcaatattctaatctcttg
gacgcaatggttatagaagatcctgttgtagctaattgcttgatagatcaacgtgaagtt
gaatgtatacttcttataccaacaagtgaagaagcatgtacgataatgtcggacgtgaca
aaagtgccaaaaaattgcaaaagagcgtttactttagtttgtgatatgttttatcccgat
ccaaattacagaacttatggtggaaagtgcggcacacgtgctaaatatcttcaagtttct
acgatgcaagcaatgcaaaggctaaaagaagagcttcaaatagcagaaagtaaaaaacaa
gaaaccatgtcagtatataactctgtatgtgaaagggtaaatcgtactagttccgaatta
aacaatgtaaccgcgtcccttagcaagttaaggtccgcacaaagtgaatgtaataattta
attaatgaactaaaggataaaatcgaatctaatgaagccacttctgctgatgtttttcgt
aacgaagctgcggaattggaaaagaaattagcacaggaacgtgctgcggaaaatcttcta
tctgaaaatgtgcaggaacttaagaaaaatgtcgaatctctcaacgaagaagttaatcga
tgtagaaatttaagacaaaatttacacacagtgattgatccccttaaggatcaaataaga
gaatttgcacaggagaaggaaaggcatcgatccgagtgtcagcgtgctactcaaaggttg
cagagtattcgtcaagccatacaatactcaaagggggaattggaaatacaagaaagggca
gcaaaaaaagcaatttccaacgccactgaaaaatgttccagaataaattctgctcgatcg
gtaaatcaaatcaaaagtttattagttgatttacgagataagattcgcgaaatagaaaat
caattcggctgtgtagacgaattacgacaacaattgaaagaaaaagaacaaaaatatgga
gtaaatattgagttgacagctctattgaaacaaagttgtgaaaaacacattgaacgggtt
aagtatcgacaaaatatttttcttcaactaagagatatgtatagtgtcgcagtgcagaaa
tcattcatggatgtgctttctttaagacattataagggctctgtagagatcgatcatgtg
aataagatgcttgatttacacgtaagtccgcgacaagataaaaattcaggcaacgatact
aaatcactttcgggaggtgaacgatcttattcgaccgtcgcgtttatcttggctctctgg
gattgcattcagttacctttctactttctcgatgaatttgatgtatttatggacaaagta
aaccgccgagtgataatggacattcttttggatcacagtagattgcatcctcagagccaa
tttactttcctcacacctctagatacgtcacacattcttgccgaagattatgtaacaatt
catcaattacaaccaccagaaagaagagtcctaagtcaatga
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