Cardiocondyla obscurior: 139108989
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Entry
139108989 CDS
T10704
Symbol
Smid
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139108989 (Smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobs03009
]
139108989 (Smid)
Ribosome biogenesis [BR:
cobs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139108989 (Smid)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_5
AAA_14
AAA_22
AAA_33
AAA_2
AAA_28
NPHP3_N
RNA_helicase
TIP49
Rad17
Mg_chelatase
AAA_18
nSTAND3
AAA_17
ABC_tran
IstB_IS21
TsaE
NACHT
ATPase
AAA_7
Vps4_C
DapB_N
DUF815
Motif
Other DBs
NCBI-GeneID:
139108989
NCBI-ProteinID:
XP_070523820
LinkDB
All DBs
AA seq
944 aa
AA seq
DB search
MQKMGKLNSSIDIIPLQGSSGDYRARHVENKHKMDQRVFRDQSLIGRVQTYMHENENKVY
IDVNEMADALQRRYKDYRGKKRGAFRAMVRKAYDDLTELFAKKPSTHECSNYDEDDFEDV
DVESDSQRTSIGDMLLHMYKKAQYKQNGNSSDKELIDISSDDDVSKTESKLEKDKKTSES
GCIEAEQSLTVTTLETEPTTTRPETTVAKEDTVLPKPEMSPSKTEKLVKLKIPTNKIIKP
SAAESTKKRPREKENVNEQFLFAKKAKTLPISETKLTFSDVGGSEKVLKTVCKLLAHMKH
PEIFKRLGISPPRGFLLHGPPGCGKTLLAHAVAGELNMPLIKVAGPELVTGVSGESEARI
RELFEQALALAPCVVFLDEIDAVTPHRSTAQREMERRIVAQLLSSLDELNLNENGDRVLV
IGATNRPDSLDPALRRAGRFDREVCLGIPDREARAKILAVHTEKVVLASNVSLSTIASLT
PGYVGADLVALIREAAMVAVDRVFEDLNKSKEVKSSEVTEVEVKKKADKEVTKNLETVID
VTADATVEASTTSTTVENDLTFSKELPKSPVPEIAEMDVIQEHSTDLPSLLTWLRTETSI
SSERLSTLSIEHSDFEIALRIVQPSAKREGFATVPDVTWDDVGSLRNIRQELQMAILAPV
KHSEHFNALGLTAASGVLLCGPPGCGKTLLAKAVANEAGINFISVKGPELLNMYVGESEK
AVRQCFLRARNSVPCVIFFDEIDALCPKRTEGDNSATARVVNQMLTEMDGVEGRQGVFLM
AASNRPDIIDPAVLRPGRLDKILYVGLPNASDRVDILRAVTKNATRPKLASDVDLNQVAY
DNRCEGYTGADLAALIREAGMEALKEIIAGYGQQEISMRHIFQAFDKVLPSVREKDIKHY
EKLSKLYSARKNSEVTSMETPMETPMETRLDAPIVDVVMEPMET
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatgggtaaattgaactcgtcgattgacatcattccgttacaaggatcgagt
ggagattacagagcaaggcacgtggaaaataaacataagatggatcaaagagtgttccga
gaccaatctttaataggccgcgtgcaaacgtatatgcacgagaatgaaaataaagtttat
attgacgttaatgaaatggccgacgcgttgcaaagacgatacaaagattatcgcggtaag
aaacgtggtgcgtttcgcgcgatggtacgtaaagcgtatgacgatctcacagaattattt
gcaaaaaagccatcgacgcatgagtgttctaattatgacgaggatgattttgaagacgtt
gacgttgagtcagattctcaacgcacttcaataggtgatatgttgttgcatatgtataag
aaggcacaatataaacagaatggaaactctagtgacaaggagctgatagatattagtagt
gatgatgatgtgtctaaaactgagtcaaagcttgaaaaagataaaaaaacgtctgagtct
gggtgtatagaagctgaacaatctttaacagttactaccttggaaacagaaccaaccact
actaggccagaaacaactgttgcaaaagaagatacagttttaccaaaaccagaaatgtct
ccatctaaaacagagaaacttgtgaaattaaaaatacctacaaataaaatcataaaaccg
tcagcagcagaatctacaaaaaaacgaccaagggaaaaagaaaatgttaatgaacaattt
ttatttgcaaaaaaagcaaaaactttacctatctcagaaacaaaactcacattttctgat
gtaggaggtagtgaaaaagttttaaaaactgtctgcaagttattagctcatatgaaacat
cctgaaattttcaaacgactcggtatatctccaccaagaggatttttacttcacggacct
cctggatgtggaaaaacattattagcacatgcagttgctggtgaattaaatatgccccta
ataaaagtagcaggacccgagcttgtgactggagtatctggtgaaagtgaagcccgtatt
agagaattatttgagcaagcattagctcttgcgccgtgtgtagttttcttagatgagata
gatgcagttacaccacatagatccacagctcaaagagaaatggaaagaagaattgttgcg
caattgttatcgagtttagacgaattaaatctcaatgaaaacggagacagagtactggta
attggtgcaacaaatcgacccgattcattagatcctgctttaagaagagcaggacgtttt
gatcgtgaagtgtgccttggaataccagacagagaagcgagagctaaaattttagcagtg
catactgaaaaagtcgtattggcttcgaatgttagtttatcgacgatagcttctcttact
ccaggttatgtaggtgcagatttggttgctctaattagggaagctgccatggttgctgtg
gatagagtatttgaagatctaaataaatcaaaagaagtaaaatcgtccgaagtgactgaa
gtcgaagtgaaaaagaaagcagataaagaagttactaaaaatttggaaactgtaatcgat
gttacggcagatgctacggtagaagcttctactacttctactactgttgaaaacgatctt
acgttttcgaaagaattacccaaaagtccagtcccagaaattgccgagatggatgtaata
caggaacattcaacagatttgccgagcttgttaacttggttgcgtacggaaacctcaatt
tcctcagaacgtttatcgactctgagtattgaacacagtgactttgagatagctctacgc
attgttcaaccttcggcgaaaagagaaggttttgcaacagttcctgatgtaacgtgggac
gatgtcggctcattacgaaatatacggcaagaattacaaatggcaattctcgctcctgta
aagcactccgaacactttaatgcgttgggtttaacggctgctagcggggtattgctgtgt
ggtccacctggatgtggaaaaacattgctcgctaaagccgttgccaacgaagctggaatt
aatttcatttctgttaaaggaccagaacttttaaatatgtatgttggagaaagtgaaaaa
gcagttcgtcaatgtttcttaagagcaagaaattcagtgccatgtgtcatattttttgat
gaaatagatgcattgtgtcctaagagaacggaaggcgataattctgcgacagcgcgtgtt
gttaatcaaatgcttacagaaatggacggtgtggagggtcggcaaggagtattccttatg
gcggccagtaatagacctgatattatagatccagctgttttgaggcctggaagattggat
aaaattttatatgttggtcttccaaatgcttcagatagagtagacattttacgtgcagta
acaaagaatgcaacaagaccgaaacttgcttcggatgtcgatttgaatcaagtcgcgtat
gacaataggtgcgagggatacactggtgcagatttagcagcgttgataagagaggctggt
atggaagcactgaaggaaataatagctggttatggacaacaagaaatttcgatgcgacac
atttttcaggcatttgataaagtgctgccgtccgttcgtgagaaggatattaaacattac
gaaaaactgagtaagttatattcagctagaaaaaattctgaagttacttcaatggagaca
ccaatggagacaccaatggagacacgcctcgatgccccaattgttgatgtagttatggag
ccaatggaaacttaa
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