Cardiocondyla obscurior: 139109143
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Entry
139109143 CDS
T10704
Symbol
Rtgef
Name
(RefSeq) rho-type guanine exchange factor
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
cobs Cardiocondyla obscurior
Brite
Membrane trafficking [BR:
cobs04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139109143 (Rtgef)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
RhoGEF67_u2
SOS1_NGEF_PH
betaPIX_CC
RHG20_PH
TSC22
ABC_sub_bind
Motif
Other DBs
NCBI-GeneID:
139109143
NCBI-ProteinID:
XP_070524078
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Position
LG16:complement(3689477..3694962)
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AA seq
578 aa
AA seq
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MSKPDAPKFVTALFSFKGKNNDELCFKKGDVITITQVDDEGWWEGTLHDKTGWFPSNYVK
EYRIPDSGLAPIKTSPERSPQESPAHQKLNRDIVLKDIVDSERVNVAELQGLVNNFLQPL
ETSNILKKDEYKQLLGNIYEVLETHQCLLANLEGTVLQGLSARVGNLFLTIAPRLKSIHA
AYCNNHPQAVCILDRYRDELNEFMERSGAISPGILVLTTGLSKPFRRLDKYSAMLQELER
YTEKNHPDRGDTQRSITVYRDIADYCASLRKQRELALQILTSGIKGWEGEELNSLGEIIH
VGSVTLATGVDRRDRYFVLFPTTLLVLSTSPRMSSFIYEGKLPLTGINVTGIEDTDEIRN
ALEITGPMIESIVVLCATKEERQRWIDLLIQEQCTSVLKSPTMSRQTTNQPNGKHQRLAM
EHCTSPGIKTPWSIASLRPAPPLYSLKNFGKIDNTTDTSRSPRSCNERQFEDDAIILKVI
EGYCLSVNARFTVHSGESNSMLFCDSQKLRDRTSSTHNRGNWESCNDRTLSETVKTLKNQ
MTDLQSQMSLLTKQLDEERRSRLSLAATVKRSMGVIDG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcccgacgcaccgaagttcgtcacggcgctcttttccttcaagggaaagaat
aacgacgagttgtgcttcaaaaaaggagatgtaataacgataactcaggtagacgatgaa
ggctggtgggaaggtacactgcacgacaagactggctggtttccttctaattatgtcaaa
gaatatagaattccagacagtggtctcgcgccgattaaaacatctccggaaagaagtcca
caagagtcaccggcgcatcaaaaactcaatcgtgatatagtattaaaggatatcgttgat
tcggaaagagttaacgtagctgaactccaaggattagtgaataattttttgcaaccactt
gaaacatcaaacatactgaagaaagacgagtataagcagttacttggtaatatatacgag
gtcctagaaactcatcaatgtttattagcaaacctggaaggaactgttttacaaggactc
tctgcaagagtagggaatcttttcctaactatcgcgccgagattaaaatcgattcatgct
gcatactgtaataaccacccacaagccgtttgtatattagatagatacagagatgaatta
aatgaatttatggagcgcagtggagcaatatcgcctggtatattagtgttaactactggt
cttagcaagccattccgaagattggataaatattcagccatgcttcaagagttagaaaga
tataccgaaaaaaatcatcccgacagaggtgatactcaacgtagtataacagtatacagg
gatatcgcggattattgcgcttccctacgtaagcagcgtgaattagcacttcaaatatta
actagtggaattaaaggttgggaaggtgaagaattaaattcattaggcgagattattcac
gtcgggtctgtaactttagcaaccggcgtagatcgcagagatagatactttgttttattt
cctactacactattggtgcttagtaccagccccagaatgagttctttcatttacgaggga
aagcttccattaactggcattaatgtaactggaatagaagatacagacgaaatacgaaat
gctttagagatcactggaccaatgatcgaaagtatagtcgtgctctgtgccacaaaagag
gaaagacaacgttggatcgatctcttaattcaggaacagtgtacaagcgttctaaagtca
ccaacaatgtctcgtcagacgaccaatcagccaaacggaaagcaccaacgactggcaatg
gagcattgtacatcgccagggattaagacaccttggagtatcgcatcattaagacctgct
cctcccttgtattctcttaagaattttggaaaaatagataacactacagatacatcacgt
tcaccgcgatcatgcaacgagcgacaatttgaagacgatgctatcatactaaaagtaata
gaaggatattgtctttctgttaatgctagattcactgtacattctggagagtctaactca
atgctattttgtgattcacaaaaattacgggacagaacatcatccacgcataatagaggc
aattgggaatcttgtaatgacagaacattgtcggaaacagttaaaaccttgaagaatcaa
atgacagacttacagtcgcaaatgtcgctactaacaaaacaattggatgaagaaagaaga
tcacgactctcgctagctgctacagttaaacgtagcatgggagttatagatggataa
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