Cardiocondyla obscurior: 139109219
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Entry
139109219 CDS
T10704
Symbol
Mei-9
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03420
Nucleotide excision repair
cobs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139109219 (Mei-9)
03460 Fanconi anemia pathway
139109219 (Mei-9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobs03032
]
139109219 (Mei-9)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139109219 (Mei-9)
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
139109219 (Mei-9)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
139109219 (Mei-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
SAM_KSR1
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
139109219
NCBI-ProteinID:
XP_070524204
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Position
LG17:complement(351231..355124)
Genome browser
AA seq
874 aa
AA seq
DB search
MLEYENQIFLEILQEDGLVIMAKGLGIETTFANVIKAYSDPGNLVIVLGTTNYDEHYLID
LLISYGTSRLPRIVNADCPSNEREVMYLEGGVMFISGRILVVDLLKNRVPLHLVTGILVY
RAHNILNSYQEAFALRLYRQYNKTGFIKAFTNSALAFTVGFMNVERVMKALFVKKLYLWP
RFHTTINNCLMQHEPDVIELHVQITPKMQSIQTTLLDVMNYIVKELKRINKYLDLDDLTV
ENAIAKKFHKQLHLQVDPIWHQLSTTTKQLFSDLKTLRSLVISLTYEDSVSFYAMLNRLR
TMEYAMKAGGWIMLDEFENLFKYAKSRVYTDKNELKPEPNPKWEALSEVIFEIQEQKHKK
KDYEKIDKVLILVHDNNICHQLKNYLIMGANAYLLYEALKKLPSNKEQKTTTDGAKKAKK
DQSLTPESNTNEEVQEPQDTYVLTLSQKCTEGTQPSTSTEDIKHQTLFEECTQLAELDLT
KECHKESAPIVFIQAIKKGGDPMALQRMLTEHTPNNIILYVTDISTVRQLEVYQNNNPSI
NLKVYFLIYGGSVEEQEYLTSLRREKEAFHRLINAKTTMVIPEDQDGKSDDCLALPTQSD
NADTDNTRKGGMQPEVKVISKVIVDMREFRSELPAILYTRGIKIEPVTLVVGDYILTPEI
CVERKSISDLIGSLLSGRLYNQAVSMTRHYAKPMLLIEFDQNKPFCFQGNYYVSKDLKNT
DITTKLQLLTLHFPKLKIIWSPSPHATAQLFEELKQGRDQPDSNIAVKIGADENVENKQL
IEEKYNSNIQDFVAKLPGVHSKNLRVLLNKGESLDHLIKLSQEEIREILGNKNDAELLYK
ALHEKCQQTNETTAGSSKGVSKVRGKKLFSRVKK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatacgaaaaccaaatcttccttgaaattcttcaggaagatggattagttatt
atggctaagggccttggtatagaaactacttttgcaaatgtgataaaagcttattcggat
ccaggaaatctagttattgttctgggaaccactaattatgatgagcattatttgattgat
ctgctgataagttatggaacaagtagattacctcgtatagttaatgctgactgtccctca
aatgaaagggaagtaatgtacttggagggtggagtgatgtttatatcgggccgtattttg
gtagtagatctattaaagaacagagttccgctacatttggtcactggtatacttgtttat
agagctcacaatattctcaattcttatcaagaagcatttgctttgcgtttgtatagacaa
tataataaaactggatttattaaggcgtttaccaattcggcactggctttcacagttgga
tttatgaacgtagaacgagttatgaaagctttatttgtgaagaaattatatttatggcca
cgtttccacacaactattaataattgcttaatgcaacatgagcctgatgttatagagcta
catgtacaaatcacaccaaagatgcaaagcattcaaaccactctgcttgatgttatgaat
tacatcgtgaaagaattaaagagaatcaataaatatttagatctagacgacctaactgtg
gagaatgcaatagccaaaaaatttcacaaacagttacatttacaagtagacccaatttgg
catcagcttagtacaacaaccaaacaattgttttctgatttaaaaacgttacgttctctt
gttatatctttaacatacgaagattctgtttcattttatgctatgttaaatcgtttaaga
actatggaatatgccatgaaagctggcggctggataatgctggatgaattcgagaatttg
ttcaaatatgctaaaagcagagtttatacggataaaaatgaattgaaaccagaaccaaat
ccaaaatgggaggctttatcagaagtcatatttgagattcaagaacaaaaacataagaaa
aaagattatgaaaaaattgacaaagttcttatcttagtacatgataacaatatatgtcac
caattaaaaaactatttaattatgggagcaaatgcatatttactttacgaagctttaaaa
aaactgccttcgaataaggaacaaaaaactaccaccgacggtgcaaaaaaagcgaaaaag
gatcaatcattaacgcccgaaagtaatacaaatgaagaagtacaagaacctcaagatact
tacgtgcttaccttatcgcaaaagtgtacagaaggaactcagccaagtacttctacagaa
gatataaaacatcagacattatttgaagaatgtacacaattggcagaattagatttaact
aaagaatgtcataaggaatccgcacctatcgttttcatacaagccataaagaaaggagga
gatccaatggctttacaacgaatgttaactgagcatacaccaaacaatataattttatac
gtgactgatattagtactgtaagacaattagaagtgtatcagaataataacccatccata
aatttaaaagtgtattttttaatttatggcgggtcagtagaagaacaagaatatcttact
tctttacgacgagaaaaagaagcatttcatagactaattaatgcaaaaactactatggtt
ataccagaagatcaagacggaaaatcagacgattgtttggctcttccaactcaatctgat
aatgcagatacggataatactcgtaaaggagggatgcaacctgaagttaaagtaatttca
aaagttattgtcgatatgagagaattcagaagtgaattaccagcgattttatatacacgc
ggtataaaaattgaaccagtaacattagtggtgggggattatattttaacaccagaaata
tgtgttgagaggaaaagtatatctgatttgattggttctttgctttccggaagattatac
aatcaagcagtttctatgacgagacattatgctaaacctatgcttcttatagaatttgat
cagaataagccgttctgttttcagggaaattattacgttagtaaagatcttaaaaatact
gatataacaacaaaattgcaattattaactcttcattttcctaaactaaaaattatatgg
tctcctagtccacatgctacagcacaattgtttgaagaattaaagcaaggacgagatcag
cctgattcgaatatagctgttaaaattggagcagatgaaaatgtagaaaataagcaacta
attgaagaaaaatataactctaacattcaagattttgtagcaaaattaccaggtgtacat
tcaaaaaatttacgagttctactaaataaaggggaatcattagatcatcttattaaactt
tcacaagaagaaataagagaaatactcggaaataaaaatgatgctgagctattatataaa
gctcttcatgaaaagtgtcagcagacaaatgaaactactgcaggaagtagtaaaggagtt
tctaaagtacgtggtaagaaacttttttcgagagtaaaaaaataa
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