Cardiocondyla obscurior: 139109248
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Entry
139109248 CDS
T10704
Symbol
Bgm
Name
(RefSeq) very long-chain-fatty-acid--CoA ligase bubblegum isoform X1
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs00061
Fatty acid biosynthesis
cobs00071
Fatty acid degradation
cobs01100
Metabolic pathways
cobs01212
Fatty acid metabolism
Module
cobs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
139109248 (Bgm)
00071 Fatty acid degradation
139109248 (Bgm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cobs01004
]
139109248 (Bgm)
Enzymes [BR:
cobs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
139109248 (Bgm)
Lipid biosynthesis proteins [BR:
cobs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
139109248 (Bgm)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas_Cas2CT1978
Motif
Other DBs
NCBI-GeneID:
139109248
NCBI-ProteinID:
XP_070524297
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All DBs
Position
LG01:complement(3579353..3587954)
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AA seq
688 aa
AA seq
DB search
MSVSQVIQSYGVINGLTRDDKAMNQSIRYATASETGLDGPDQILSTDKDTACSPDDRIRI
KLDNNGPNSFTPVSIPGLFTKTAKLYPDHIAMVSRSDANGRRTTYTFQEYEATVRTVAKA
FLKLGLERHHSVCIIGFNCPKWFIADLAAIYAGGLATGIYTTNSPEACQYCAEHSRANII
IVEDNKQLQKILQIKHNLTHLKAIIQYDGVPSESDVLSWEALLNIGTKESEDKLLSVMKT
IGINECCILVYTSGTVGNPKAVMLNHDNILHDVRSLLLMIQLKEKSEVVVSYLPLSHVAA
QLLDIMANIVLATTVYFADQNALKGTLVNTLLEAQPTLFLGVPRVWEKIYEKMQEKARSN
GVIKTWIAKWAKAQGLHYYMNKINGEDYKHWGYVFAKWLVFDKVKAALGLNRCKIFVSAA
APISNDIKQYFMSLDIPLLEAYGMSECSGAHTLITLKEFCVEGVGRPLLGLYTKLDNINE
HGEGEICMGGRHVFMGYLNAPDKTAEAKDKNGWLHSGDLGKFDSNGNLFVTGRIKELIIT
SGGENVAPYNIEQAILSELPHLSNSMVIGDKRKYLTVLVTLKSDMNEETGEPLDTLNSNV
LKWAKSIGSSAKTVTEVIGSRDPAIYEEIDKAIKRANEQAISNAQKVQKFEILPRDFSIS
TGELGPTLKLKKNVVQEKYADLIEKMYE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatctcaagttatacagtcgtatggagtcataaatggtcttacaagagacgat
aaggcaatgaatcaatcaatcagatatgcgactgctagtgaaactggtctcgacggaccg
gatcagatactttccacagacaaggacaccgcgtgttctcccgacgatagaattcgaata
aaattagataacaatggaccgaattcgttcacgcccgtatcaattcccggacttttcact
aaaacagctaagctctatcctgatcacatcgcgatggtatcgagatctgatgccaatggc
agaagaaccacgtataccttccaagaatatgaagccaccgtgagaaccgttgcgaaagca
tttctgaagttaggtttggaacgacaccatagcgtttgcataataggattcaactgtcca
aaatggttcattgctgatctcgcggcaatatacgctggcggactcgctaccgggatttat
acgacaaattctccagaggcatgccaatactgcgccgaacacagtcgggcaaatataata
atcgtcgaagataacaagcaattgcaaaaaatcttgcaaataaagcacaatctgactcat
ttaaaagcaattattcaatatgacggtgtaccatctgaaagtgacgttttaagttgggaa
gctttattaaatattggtacaaaggaatcagaagataaattattatctgtgatgaagaca
atagggataaacgaatgttgcattttagtgtacacgtcgggaacggtcgggaatccgaaa
gctgtgatgttaaaccacgataatatattgcacgacgtgaggtcgttgctattaatgata
caattaaaagaaaagtcagaagttgtagtgagctatttgccgttatctcatgttgcagca
cagctacttgatatcatggcaaacatcgtgctagcgaccacggtatattttgcggatcag
aatgcgttaaaaggcaccttagtgaatacgttactcgaggcacaaccgactcttttctta
ggagtgccgagggtatgggaaaagatatacgaaaaaatgcaagaaaaagcgcgtagcaac
ggtgtaataaaaacctggatcgctaaatgggcgaaagcgcaaggtcttcattattacatg
aataagataaatggcgaggattacaaacattggggctacgtctttgccaaatggcttgtt
tttgataaagttaaggcagcattgggtcttaacagatgcaaaatatttgttagcgcagca
gcccctataagtaacgacattaaacaatactttatgagtttagatatacctttattagag
gcgtatggaatgtctgagtgcagtggagctcatacattaatcactcttaaagaattctgc
gtggaaggtgtaggaagacctttacttggtctgtatacaaaattggataatataaatgaa
catggagaaggtgaaatttgtatgggtggacgacatgtatttatgggttacttaaatgca
ccggataaaactgcggaagccaaagacaaaaacggctggctacatagcggtgatctcgga
aagtttgactcgaacggaaatttgtttgtaaccggtagaataaaagaactcataattaca
agtggaggagaaaatgtagcaccatataatatagagcaagcgatattatcggaattacca
catttaagtaactctatggtgatcggagataaaagaaaatatctaacggtccttgtcacg
ctcaagagtgatatgaatgaagaaactggtgagccattagatacgctgaattcaaatgta
ttaaaatgggcaaagtctattggtagtagtgccaaaacagtcacagaagttatagggtct
cgcgatccagccatatacgaggaaatcgataaggcaatcaaaagagctaacgaacaggct
ataagtaatgctcaaaaagtacagaaattcgaaattcttccgcgtgacttttcgatttcg
accggtgaattaggacctacgttaaagctcaaaaagaacgtagttcaggagaagtatgcg
gacttgatagaaaagatgtacgaataa
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