Cardiocondyla obscurior: 139109286
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Entry
139109286 CDS
T10704
Symbol
Mp
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
cobs Cardiocondyla obscurior
Brite
Exosome [BR:
cobs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139109286 (Mp)
Proteoglycans [BR:
cobs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
139109286 (Mp)
Glycosaminoglycan binding proteins [BR:
cobs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139109286 (Mp)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139109286
NCBI-ProteinID:
XP_070524309
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Position
LG17:4309377..4503017
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AA seq
1162 aa
AA seq
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MPPRSLLVIFAALCATCSHADFFSGKEVVYDLMVASVSSMTDDNNLYMDDGVDGFPAFGF
RPGSEVKQPYRLYLPEKLPAEFTLVATFKPASFRTSYLFAVLNPFETVVQLGIRISDGPD
SNQNISLIYTNSDEHSHSEEVAKFTVPKLTKKWSKIVIKVSANDITFYLNCHEMARQRVT
RIPQELVFDTASTLYIAQAGPHIQERYDGLLQSLKLYAGHPPDLVKCTADFDFSADEEFA
SGDYDVNLFDGSGDADLNKISRDVDEDKSEESNPPPFITPPPPNPDYKGPKGEKGDKGEK
GESVRGPPGPPGPPGHDEDSQMKIPQGPPGQKGDPGTCTCNATALMSSFTMPKMIQGPKG
EPGVPGQAGKQGLMGLTGAAGPPGERGLQGPSGAKGDKGDIGIVGPEGPQGQKGEPGRDG
IPGEKGAQGPPGPPGKGEFSGYDPSWKPRNIYRPEGITMRPGLPGQKGEPGISGNPGPKG
EAGIHGSKGIKGEPGHKGGKGDHGKEGPRGVQGFKGEPGAPGAPGLPGAPGENGRPAEKG
AKGDTGPEGKIGSPGPPGPPGVGGSGGINVGDLGFGTKGDKGDSGAIGYQGDKGTKGEKG
DKGDSGPAGIPGINGIQGPQGDKGEPGKDGVSGLPGIPGTKGERGERGPPGATTVANSGD
YITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGITGEIGLPGWMGRPGTPGIPGSIGPMG
PKGEKGEPGAPSPYGVSVGIKGDKGDDGFPGIPGQAGRDGQKGPPGPPGPPGTPSQGKYI
PVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHVFGERDYYPRQGARSSLDELKALRELKQ
LKELKELKEQLGVVTAATRGPLESTTKIVPGAVTFQNTEAMTKMSSVSPVGTLAYIIDEQ
ALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPANPPFEASNLINQIPVKADGTGWYPRM
LRMAALNEPFTGDMHGIRGADYACYRQARRAGLRGTFRAFLSSRVQNVDSIVRLGDRDLP
IVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAWPEKVAWHGSHKLGDRA
MDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCIEVTSELVRRRRNADSP
LDDDVEMSEDDYIEYLEELMQY
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaggtcgttactggtgatcttcgccgcgctatgcgcgacgtgcagccacgcg
gacttcttcagcgggaaggaagtggtgtacgatttgatggtggcatcggtgtcgtcgatg
acggacgataataatctttatatggacgacggcgtggacggatttccggcgtttggcttt
cggcccggatccgaagtgaagcaaccctacagactatatcttccggaaaagttgccggcc
gagttcaccttagtggccacgtttaagccagcctcctttagaacgagctaccttttcgcc
gttcttaatcccttcgaaaccgttgtccaattgggcattagaatttcggatggacccgac
tcgaaccaaaatatctcgctgatatatacaaattcggacgagcactcgcattcggaggaa
gtggcgaaatttactgtgccgaagcttacgaagaaatggtcgaagatcgtcattaaggtc
tctgcgaacgacatcactttctacctcaattgccatgagatggcccggcaaagggtcact
aggatcccgcaggaattagtattcgataccgccagcacgctgtacatcgcgcaagccgga
ccacacatccaggagcgatacgacggtttgctgcaatctttgaagttatacgccggccat
cctccggaccttgtaaaatgcaccgctgactttgacttttcagcagatgaagaatttgct
tctggtgattatgatgtcaatttgttcgatggttccggcgacgctgatttaaataagatc
agtcgagatgtggacgaagacaaaagtgaagagagtaacccaccgccattcatcacgccc
ccgcctccaaatcctgattataaaggtccgaaaggcgagaagggtgacaaaggggaaaag
ggcgagagcgtcagaggtcccccggggcctcctggcccgcctggtcacgacgaggattcg
caaatgaagataccacagggaccacctggtcagaagggagaccccggcacttgcacctgc
aacgccacggccttaatgtcttcctttacaatgccaaagatgatacaagggccgaagggt
gagccaggagtacccggacaggcaggcaagcagggcttaatgggtctcacgggtgcggca
ggaccgccgggggaaagaggactgcagggtccgtccggggctaaaggcgacaagggtgat
atcggaatagtgggaccggaaggtccgcaaggtcagaagggcgaaccgggtcgggacgga
atacccggtgaaaagggtgcgcaaggtccaccggggccacccggaaaaggagaattttct
ggctatgaccccagttggaaacctcgaaatatttacagaccggaaggtatcactatgaga
ccaggacttccaggacaaaagggtgagccaggcatatcaggaaatcctggccctaaagga
gaagccggaatacacggatccaagggtatcaaaggcgaacccgggcacaaaggtggtaag
ggcgatcatgggaaggaaggtcctagaggagttcagggctttaaaggtgaacctggcgca
cctggtgcacctggattacctggcgcacccggcgagaacggccgacctgcggaaaagggt
gctaagggcgatacgggacctgaaggaaaaataggatctccaggaccccccggtccaccg
ggtgtgggcggttctggtggtattaacgtgggagacttaggatttggcacaaaaggagat
aagggggattctggagcgatcggataccagggtgataagggcacgaagggcgagaaaggc
gataagggtgactccgggccagctggtattcccggaataaatggtattcaaggacctcaa
ggagataaaggcgaaccgggtaaagacggagtatcaggattacccggtatacctggcact
aaaggtgaaagaggtgagagaggtcctcctggagccactaccgtcgccaattccggggac
tatattaccatcaaaggtgagaaaggcgcagaaggaaaacggggtagaagaggacgccct
ggaccgcctggtcctgtgggtcctcccggaaaaccaggaattacgggagaaattggtcta
ccaggatggatgggtcgtcctgggactcctggaattccgggaagcatcgggccaatggga
cccaagggagaaaagggagaacctggcgcaccgagtccttacggcgtttccgtcggtatc
aaaggtgataaaggggacgacggtttccccggaattccgggacaagcgggaagagacggt
cagaaaggacctccaggacctcccggacctcctggaacaccgtctcaaggaaaatatatt
ccagttccgggacccccaggtcctcccggaccgcctggtccgcccggcttgtctttaatc
gggcagaaaggggaacctggcattggtagaagtcacgttttcggggaaagagattactat
cctagacaaggagccagaagtagtctggacgaattgaaagctctacgtgaactcaagcaa
ctgaaagaactgaaagaactgaaagagcaattaggtgttgttactgccgctacaagggga
cctttagaaagtacaacgaaaattgtgccaggagctgttacgttccaaaacacagaagcc
atgacaaaaatgtctagtgtaagtccagttgggaccttggcttatatcatagacgaacaa
gctttactagtcagagttaataatggatggcaatatatcgcacttggatcactattacct
atcacaacgccagcaccaccaacgacatccccaccgccagcaaatcctccatttgaagcc
tccaacttaattaatcaaatacccgtaaaagccgacggaacaggatggtatccgcgaatg
ttaagaatggctgcgttgaacgagcccttcaccggagatatgcatggtatacgaggagca
gactacgcttgctatcgacaagctagacgagcagggttgagaggtaccttccgtgctttc
cttagctctcgagttcaaaacgtcgatagcattgttagattaggagatcgagatcttcct
atagttaacataaagggcgacgtactgttcaactcttggaaagaaatgtttaacggaaat
ggagcgtacttttctcaaaatcctagaatctacagcttcaatggaaaaaacattctcact
gactttgcatggcctgaaaaagtcgcgtggcacggctctcacaaactcggcgaccgagcg
atggacacttattgcgacgcctggcactcgagcagctcggatcgctacggattaggttcg
ccgttgaccggcggtcgactattagaacaagtacgatactcgtgcgacaataaattcgcg
ctgctctgcatcgaggtgacgagcgagctagtaagaagacggcgaaacgccgacagtccg
ttagatgacgacgtcgaaatgtcggaggacgactacatagaatacttggaggagctcatg
caatactga
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