Cardiocondyla obscurior: 139109316
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Entry
139109316 CDS
T10704
Symbol
Chb
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139109316 (Chb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cobs04812
]
139109316 (Chb)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
139109316 (Chb)
Cytoskeleton proteins [BR:
cobs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
139109316 (Chb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_2
Vac14_Fab1_bd
Cnd1
TOR1L1_N
HEAT_EZ
MMS19_C
Adaptin_N
INTS1_R4
UTP20
RTP1_C1
PDS5
Tti2
Arm
ParcG
ECM29_N
Sec7-like_HUS
SCD
HEAT_DAAF5
Ipi1_N
DUF5691
Motif
Other DBs
NCBI-GeneID:
139109316
NCBI-ProteinID:
XP_070524375
LinkDB
All DBs
Position
LG17:complement(2719251..2751529)
Genome browser
AA seq
1487 aa
AA seq
DB search
MAVNARDMDGFMPLLSTTDIKKKLNVGSALLNFLGDSSKSIECQDIGMFIDNVIPWLGNG
NPKVVQNGLEILTYLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQNLLDRLRPAFNHKNAKLREEALILLTTTLNEHGADEMALSGVIPSIVKMLSDQSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKMLLLIEKFDQLKAAGDLLPLAMSSD
VGKDSDEIDRAIKSAPVKRLNMLPKRGQFGPAKTPSSALAPFGTSSYTAPRAPTIKRTLS
VKSTSAQAGAVDEECFITSFEDVPTVNLFSAKDLEEQMKIIKDTVGDDKKDWKLRMDSMR
KLRAIVLAGGTNYENFHECLKNVQRPFEQACTDLRSQVAREACITLAFLSQSLKIKFASF
GEAVLLTLMNLIQNSAKVVASAGAVAVRFILQNTHCSRYVPIIISCVSNKSKDIRRASWE
YLALILQTWPAQILQKHITTLPEALKKGIADSDSEARAFARKSYWAFKNHFPEQAEILLN
TLDASYKRSLMSLSNSGSSNSLNIVANARSSSVSPRTARPVMSAAGSTENLHQTTSQPHG
SLRRTPSLPRSYRQSGIPILQRPTDSHYRGTPGVRSTSAIDLHAAQRAKARLMYGNLSRQ
KAAAAITRPSKSPDPNAIASPERIARTRTRMSGVSQSQPSSRSGSPSSRLSYATYNREGD
SLIGRPRRLSGHTIGSTSNSREPSPQRFGMDRSFASKLRGRNLHMSPTDSTRPPVMAQKM
LQKSREAESALADALTFDSIDNYTRIPGNKGDHSDDSENSSICSERSIDGFRRTSDSFSW
SGSQSRLYRDVWDQSIPKDIKEIIENCAHKHWADRKEGLVSLQHYLNNGNTLTTADLRRV
TDIFAKMFMDSHTKVFSLFLDTLNELIITHNEGLSDWLYVLCARLLNKLGTDLLGSIQTK
IYKTFDIVRDHFPGQQLLPAVMRYLTDPTQTPNSRVKVAALTFITQIAETAEPSAVGSSA
STALARLLEWSNDGKSHDVRRHAQNAVISLYNLNPPEVTMILSDLPKSYQETAWPLVQNH
LKKSYTSNPASPGTPPPRAQSSPARTKAKNDVKTDIKSEVDGGDENLEEVYNASYRSLRR
TTAEIQNYGFERLERATTSKDSGISNMADVEERIEGLTLPNSGRSSSVSSPTQRGRSVSN
ITVNGSDTIAGDLILPQENNGYKTHGSSPDSINRPEIVDNMIKTLQSKVSQTSEKVSALQ
EFQLYVREGDSSHIKRNFKKVLKVLLDSLSNDDKGIQVEVLQTLIDMLKCSELVESFSSY
NELLVLKVIYAYKSDDQKIDSSSGSGGRSPIHWNAEKCAATMAMVLKPEQIIHLVSTIIA
TESYPLNMGAIKMLHKVVEHWGREAIEPHLAKVMPGLIKAYDDTESAVRKSAVFCMVAIH
VAVGEEVLKPHLSCLYSSKLKLLNIYIQRAQQQANSQPASPRSNSKN
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaatgcgcgcgatatggacggcttcatgccgctcctgtcaacgacggacatc
aaaaagaagctcaacgttggcagcgcgctgctcaatttcctcggcgattcgagcaagagc
atcgagtgccaggacatcggaatgtttattgacaacgtcataccgtggctcggcaacggc
aacccgaaggttgtccagaacggcttggagatcctcacgtatctcgcggatcggatgggt
cacgacttcaagccttacatctccaccatcatccagccgacgatagacaggctaggcgac
agtaaagacgctaccagggagaaggcgcaactggtgctcctaaaaattatggaaaaggga
tgcatgtcacctcagaaccttctggacagacttcgtccggcttttaatcacaagaatgca
aaattgcgagaggaggctttaatcctgttaacgacaacactgaacgaacacggcgcggac
gagatggcactgtcgggagtgatcccgagtatcgtgaaaatgctgtctgatcagtcggaa
aaggttcgggaaaccgctttgaacactttggcggatatctatcgacacgtaggcgagaga
ttacgcgtcgatttgcaaagaaagcacaatgtaccgcaagccaaaatgctactgctaata
gaaaagtttgatcaactgaaggctgctggggatcttctacccttggcaatgtcatccgat
gttggcaaagacagtgacgaaatcgatagagcgatcaaatcggctcctgttaagagactg
aacatgctcccaaagagaggtcaatttggacctgctaaaacaccgtcgtctgccttagct
ccttttggtacttcatcctacactgctccaagggcaccgaccatcaaaagaactctgtca
gtaaaatcgacatcagcgcaagccggagccgtcgacgaggaatgttttattacttcgttc
gaggacgtgcctactgtcaatttattctcggcaaaggatctcgaagaacagatgaagatt
attaaagatactgtgggagacgataaaaaggactggaagctgagaatggatagcatgaga
aagttgagagctattgtactcgcgggtggcactaattacgaaaatttccacgagtgccta
aagaacgtgcagcgaccgtttgagcaggcgtgcaccgaccttagatcccaagtagcgcga
gaggcctgtataactctcgcttttctgagtcagagcctgaagatcaaatttgccagtttt
ggcgaagctgttttgctcacgttaatgaacctcatacagaatagtgccaaggtcgtggcg
tcagccggtgcggtggcagttcggtttatccttcaaaatacccactgtagtcgatatgtg
cctattataatatcgtgcgtgagcaacaaaagcaaagatattcgcagagcatcttgggaa
tatctggctttaattctgcaaacctggcctgcgcagatattacagaagcacataacaaca
ttaccggaagcgcttaagaagggtattgcggattccgattcggaagcgcgagctttcgcc
agaaaatcgtactgggcatttaaaaatcactttccagagcaggctgagatactacttaat
accttggatgcatcgtacaaacgctcattaatgtctctcagtaatagtggcagcagtaac
agtttaaatatcgtggctaatgcaagatcgtcgagtgtcagtccgcgtacagctaggcct
gtaatgagcgcggcaggtagtacggaaaatttgcatcagactacgagtcaaccgcacggg
tcgctcagacgtactccgtccttgcctcggtcttatcgtcaatctggtatcccgatacta
caaagaccaacagacagtcactatcgaggtacaccaggagttagatccaccagtgcaatt
gacttgcatgctgctcaaagagcgaaagcgaggctgatgtacggaaatttaagcagacaa
aaagcagcggcggcaattactcgtcctagtaaatctccggatcccaatgcaattgctagc
ccagaaagaattgcaagaacgaggacaagaatgtcaggagtttcacaatctcaacctagc
agtagatccggttccccgtcgtccaggttaagttacgctacgtataatcgcgaaggtgat
tcactgataggcagaccgagacgattatccggacacacaattggcagtacaagtaacagt
cgtgaacccagtccacagagatttggaatggacaggagttttgcgagcaagttaagagga
aggaatctacatatgtcaccgacagacagtactagaccgccagttatggcgcagaagatg
ctacagaagtcgcgtgaagcggaatctgctctggcggacgctctgacttttgatagtatc
gacaactacacaagaataccgggcaacaaaggagatcacagtgacgacagcgaaaacagc
agcatatgctcagaaagaagcatagatggttttagacgaactagtgactcgttctcatgg
agtggctctcaatcgagactataccgtgacgtatgggatcaatctatcccgaaggatatt
aaagagattattgaaaactgtgctcacaagcattgggcagacagaaaggaaggcttagtg
agtttacagcattatttgaacaacggaaatactttgacaacagcagatttacgtagagta
acagacattttcgcaaaaatgtttatggattctcataccaaagtgttcagtttattcttg
gacacgttgaacgaactaattataactcataacgaaggtcttagcgactggttatacgtt
ttgtgcgcgaggcttcttaataagttgggtaccgatctattgggatctatacagacaaaa
atttacaaaacgtttgacattgtaagagaccattttccgggtcaacagcttttaccggct
gtgatgaggtatctgacagatccaacacaaacgccaaattctcgtgtaaaagtagcagca
ttgacttttatcacgcagattgctgagacggcagagccgtcggcagtgggcagttctgca
tcgacagcacttgcacggctgctcgagtggtcgaacgatggcaaaagtcacgacgtgaga
agacacgcgcaaaacgctgtgatatcactttacaatctcaatccgcctgaagttactatg
atcctttccgatttaccaaaatcctaccaagaaacagcatggcctttggtgcagaaccat
ttgaaaaaatcgtacactagtaatccagcgtcacctggtacgccaccaccaagagcgcag
agctcgcctgctcgaacgaaagccaaaaacgatgtcaaaacggacatcaagtctgaagtt
gatggaggggatgaaaatttggaagaagtatacaatgcttcttatagatctttgcgacgc
acgactgctgaaattcaaaattatggctttgaacgcttggagagagccactaccagtaaa
gacagcggtatcagtaatatggcggatgtcgaagaaagaatagaaggtctcacgttaccg
aattctggtcgatcttcatccgtttcttcaccgacacaacgaggacgatctgttagtaat
ataactgttaacggttctgatacaattgccggtgatttgattctacctcaagaaaataat
ggttataaaacgcatggatcatcaccagattcgataaacagaccagaaatcgtagataat
atgattaaaactttgcaatctaaagtatctcaaacttcggaaaaagtatcggcgttgcaa
gaatttcaattatatgtccgcgaaggcgattcatcacatattaaacgaaatttcaaaaaa
gtgctcaaagttttattagatagcttatccaatgacgacaaaggaatacaagtagaagtg
ttgcaaacgttaatcgatatgcttaaatgttccgaattggtagaaagtttttcctcctac
aatgagttattagtactaaaagttatctatgcctacaaatcagacgatcaaaagatcgat
tcttccagcggtagcggcggcagatctccaattcattggaatgccgaaaagtgcgcggcg
acgatggctatggttttaaaaccggaacaaattatccatttagtgtccactataatcgca
acggaatcgtatccattgaatatgggtgcaataaaaatgttgcacaaggtggtggagcat
tggggtcgagaggccattgaacctcaccttgctaaagttatgcctggtcttattaaagct
tatgatgatactgagagcgcagttcgcaagagcgctgtcttctgtatggtggcgatccat
gtcgcggtcggtgaggaagtgttaaagccgcatctgagctgtttgtactccagcaagctt
aagttattaaacatttatattcaacgggcgcaacaacaggcgaatagtcagcccgccagt
ccacgtagtaacagcaagaattaa
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