Cardiocondyla obscurior: 139109563
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Entry
139109563 CDS
T10704
Symbol
Atg18a
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04136
Autophagy - other
cobs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139109563 (Atg18a)
04136 Autophagy - other
139109563 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139109563 (Atg18a)
03029 Mitochondrial biogenesis [BR:
cobs03029
]
139109563 (Atg18a)
Membrane trafficking [BR:
cobs04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
139109563 (Atg18a)
Mitochondrial biogenesis [BR:
cobs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139109563 (Atg18a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40
WD40_MABP1-WDR62_2nd
WDR55
DUF7165
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_VPS8
EIF3I
Beta-prop_HPS5
Beta-prop_Aladin
VID27
Beta-prop_EML
Beta-prop_Vps41
Ge1_WD40
RbcS
Motif
Other DBs
NCBI-GeneID:
139109563
NCBI-ProteinID:
XP_070524808
LinkDB
All DBs
Position
LG18:complement(4592943..4601148)
Genome browser
AA seq
476 aa
AA seq
DB search
MREIPREINLDVLTQGLRYSISGLMNLAANQTSDPTSDAQSNGPYFVNFNQDCTSLAVGS
KSGYKLYSISSTGHLEKIYENDDADFEDICIVERLFSSSLVAIVSLKSPRTLTVCHFRKG
TEICNYSYSNTILAVKLNRARLVVCLEESLYIHNIRDMRVLHTIRDTPPNLTGLCTLSPN
SDNCYVAYPGSNTIGEVQIFDANHLQAKTMIPAHDSPLAAIAFSSTGTKVATASEKGTVI
RVFDVHEGTKLFEFRRGVKRCVTINSLSFSMDSMWLCCSSNTETVHIFKLEEPKETPNKQ
TADEAQSWMGYLTKAVTASATYLPSQVTDVFTQGRAFASVHLPFQGLKNVCAITVTHKVP
KLLVASADGYLYVYSVDPTESGTCTLLKQHRLDDKERDESDCGGSGSGAAATTNNTNTAC
INSYAGVLRGRSPDSMSGTESEKYQEMIAATESPPKGGPFRLDDDTEFPPVTQRTD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagatcccgcgcgagatcaacctggatgtattaacgcaagggctaaggtacagc
atatcaggactcatgaacctcgcggccaaccagacgtccgacccgacgtccgacgcccag
agcaacggcccctacttcgtcaacttcaatcaggactgcacgtccttggctgtgggatcg
aaatccggatacaaactttattccatcagctccactggccatcttgagaaaatatatgaa
aatgatgatgcagacttcgaggacatatgtatcgtcgagcgattgttcagcagcagtttg
gtggcgattgttagtcttaaatctcctcgtacgcttacggtgtgccactttagaaaagga
acagaaatatgtaactacagttactcgaatacaattttggctgtgaaactcaacagagcg
agattggtggtatgtctggaagaatccctttacattcataacatacgggatatgagagtg
ttacacacaattcgcgacactcctccgaatcttacgggtctttgtacactttcgccaaat
agcgacaactgttacgtagcttacccaggatcgaatacgattggagaagttcagatattt
gacgcgaatcatcttcaagcaaaaacaatgataccggcacacgacagtcctttggcagca
attgctttcagctcgactggtacaaaagtggcgacagcttctgaaaaaggcactgtgatt
agagtctttgatgtccacgagggtacaaagttgtttgaatttcgacgcggagttaagcga
tgcgtcacgataaacagtctttctttcagcatggactctatgtggctctgttgttccagt
aatacggaaactgtgcatatattcaaactggaagaaccgaaagaaacgccaaacaaacaa
accgcagatgaagcacaaagctggatggggtatttgacgaaggctgtgacagcgtcggcc
acatatttgccgtcgcaagtgactgacgtttttactcaaggacgtgctttcgcgagcgtc
catctaccatttcaaggtttaaaaaatgtctgtgccatcactgtaacacataaggtacca
aaattgttagtagctagcgccgatggttacttatatgtctattctgtggatccaacagaa
agcggaacctgtacccttttaaaacaacacagattagacgataaagagcgggatgaatca
gattgtggtggttctggttcaggtgcagcagctactacgaataatacaaatacagcctgc
ataaatagctacgcgggtgtgttgcgtggccgttcgccagactccatgtcaggtactgag
tcagagaagtatcaagagatgatagcagcaacggaaagcccaccgaaaggcggcccgttt
cgtctggacgatgataccgaattcccgcctgtcacacaaaggacagactga
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