Cardiocondyla obscurior: 139109720
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Entry
139109720 CDS
T10704
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139109720
03036 Chromosome and associated proteins [BR:
cobs03036
]
139109720
Spliceosome [BR:
cobs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139109720
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
139109720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
RRM_11
L27_1
RRM_10
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
139109720
NCBI-ProteinID:
XP_070525111
LinkDB
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Position
LG18:complement(2015860..2019891)
Genome browser
AA seq
910 aa
AA seq
DB search
MDEEMDAVNEELFPEGVSNEEEMVTSETEGRADQEAAEAKSLISEDDDEEEDEDDVNEAE
VKFLEASLSANSYDYSTHKALINKLHAMGELDRLRAARNNMSNIFPLSPELWLVWLNDEI
KLATTNEQKAEVIELCERAVKDYMSVELWLVYLQFIIEHMGKDEEKIDKIRQLFERALTT
VGMHVTKGAIIWEAYREYENMILISMLSLDGENENGRKKAQLERIISLFKRQLSSPLLDM
DKTYEEFKSWCAKYSAEIEKSILKWTSDEKSILKYYKQSSTKLTSYLPFEEKLVSAQGQS
ELLDAYKGYLLYIKQNNSDLITILYERAITDLSLETSIWLDYITYLENKSRMVHVLDPIY
HRASRNIPWCPTIWRKWMRSYEAWNKPISEIQAILENALSAGFSTAEDYRNLWIAYLECL
RRKLDQYPDEERDKHLNVIRKTFNRACEYLAKYFGLDGDPNCVILQYWARFEAVHADDME
QTRRLWADILSQEHSATASYWLEYIVLEKCYGDSKHLRKLYQKALSSTQDWPETIANSWL
DFERDKGTLEQMEFCEIKTKEKLDKTMEERQKAQELSSQDESSILSKKANKRKADDGRWK
NLGSSPSKIVKSDVGIKPKLRESVLNINSKTTNPEKPEIAPPPGYKTTEDKDVDDKNSQY
EVDDMIAVFVSNLDYITTEDEIRDALKPAGPVTSIRMVKDYKGRSKGFAYVQLSSIEAVK
VALELDRTPIKGRPMFISKCDPNKRTRSSTFKYNSTLEKNKLFIKGLPLTTTKEELEEIF
KVHGDLKEVRIVTYRNGHSKGLAYVEYHNEATAAKALVSTDGMKIQDKVINVAISQPPDR
KKPQTEESGGQVKSLGGTSTSRTAFGVPKTLLSMVPRNVKTSSSNGSAASDKSAQLMSNK
DFRNMFISKK
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagatggatgctgtgaacgaagagctttttccggaaggagtttcgaatgag
gaagagatggtgacgagcgaaacggagggaagagctgaccaggaagcggcagaggccaaa
tctctgataagcgaagacgatgacgaagaggaggacgaagacgacgtcaacgaggcggag
gtgaaattcctggaggcctccttgtcggcaaactcatacgattattccactcacaaggcc
ctgattaacaaattgcacgcgatgggcgaacttgaccgcttacgagctgccaggaacaac
atgagcaacatatttccattaagtcctgagctctggctcgtttggttaaatgacgagata
aaattggctaccactaacgagcaaaaggctgaagtgatcgaattatgcgagcgagcagtc
aaggattacatgtctgtagaactgtggctggtatatctacaatttatcatcgagcatatg
ggcaaggatgaagagaagattgataaaattcgtcagctttttgaacgtgcactgactact
gttggaatgcatgtgacaaaaggagctataatatgggaagcatatcgcgaatatgaaaat
atgatacttatttctatgttgtctttggatggtgagaatgaaaatggaagaaaaaaagct
caattagaacgcattattagtttgtttaaacgccaattatctagccctctcttagacatg
gataaaacttatgaagaattcaaatcatggtgcgctaagtatagcgcggaaatagagaaa
tctattttaaaatggacttctgatgagaaatctattttaaaatactataaacagagttct
acaaaattgacgtcgtaccttcctttcgaagaaaaattggtttctgcacaaggccaaagt
gaactacttgatgcttataaaggttatttactgtatataaaacaaaacaactctgatctt
attacaatcttgtacgaaagagcaataactgatttaagtttagaaacatcgatttggttg
gattatataacttatttagaaaataaatcacgaatggttcatgtattggatccaatttat
catagagcatcgagaaatattccgtggtgccctactatttggcgaaagtggatgagatca
tatgaggcatggaacaaacctatatcagaaatacaagccatattggagaatgcattgtcc
gctggtttttcaacagcggaagattatcgtaatctgtggattgcatatctcgaatgtttg
aggcgcaaacttgaccaatatcctgacgaagaaagagataaacacttaaatgttattcgt
aaaacgtttaacagagcgtgtgaatatttagcgaaatacttcggtttggatggcgaccct
aattgcgttatcttgcaatattgggcgagatttgaagcggtacatgcagatgacatggaa
caaactagaagattatgggctgatattctctcacaagagcattctgcaacagcttcttac
tggttggaatatatagtactagaaaaatgttatggagattcgaaacatctaaggaaactg
tatcaaaaagccttgagttctacacaagattggcctgaaactatagcaaactcgtggtta
gattttgagcgtgataaaggaactttggaacaaatggaattctgtgaaataaaaacaaaa
gaaaagcttgataaaactatggaagaaagacaaaaagcgcaggaactttcttctcaggat
gaatcatctattctaagtaagaaagcgaataagagaaaggcagatgacggtagatggaaa
aatttaggaagttctccatcgaaaatcgtaaaatctgacgtaggaataaaaccaaaatta
cgagaaagtgttttaaatattaatagcaaaacaacaaatccggagaaaccagaaattgca
ccaccacctggttataaaacaacagaagataaagatgtggatgataaaaatagtcagtat
gaagtagatgatatgattgcagtttttgtcagtaatttagattacataacaactgaagac
gaaataagagacgctttaaaacctgctggaccagtaacgtcgatcagaatggttaaagat
tataagggacgcagtaaaggatttgcttacgtacaattaagtagcatagaggctgtgaaa
gtagctttggaattggacagaacgccaataaaaggacgtccaatgtttatttcaaaatgt
gaccctaataaaagaacgcgaagttcaacatttaaatacaattctacacttgaaaagaat
aaactctttattaaaggacttccacttacgacaaccaaagaagaattagaggagatattt
aaagttcatggagatttaaaagaagttcgtatagttacttatcgaaatgggcactcgaag
ggcttggcttacgttgaatatcacaacgaagcaacagctgcaaaagctcttgtgagcacg
gatggtatgaagattcaggataaagtaatcaatgttgcgataagtcaaccacccgatcgc
aagaaacctcaaacggaagaaagtgggggacaagtgaaatcattgggtggaacatcgacg
agccgtacagcatttggtgtgcctaaaacgttgctatctatggttccccgtaacgttaaa
acaagtagcagtaatggcagtgcagcttcagataaaagtgcacaattgatgagtaataag
gactttaggaatatgtttatcagtaaaaaataa
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