Cardiocondyla obscurior: 139109754
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Entry
139109754 CDS
T10704
Symbol
Dnapol-epsilon255
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1 isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03030
DNA replication
cobs03410
Base excision repair
cobs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139109754 (Dnapol-epsilon255)
03410 Base excision repair
139109754 (Dnapol-epsilon255)
03420 Nucleotide excision repair
139109754 (Dnapol-epsilon255)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobs03032
]
139109754 (Dnapol-epsilon255)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139109754 (Dnapol-epsilon255)
Enzymes [BR:
cobs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
139109754 (Dnapol-epsilon255)
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
139109754 (Dnapol-epsilon255)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
139109754 (Dnapol-epsilon255)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
zf_DPOE_2
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
139109754
NCBI-ProteinID:
XP_070525164
LinkDB
All DBs
Position
LG18:1930330..1938948
Genome browser
AA seq
2238 aa
AA seq
DB search
METLKNTGADRPNVFNKRNLNQVTNAPGENALGRLLEIKEDIRIDTVYGFRRVTDFKERI
GFLLNMHVTEIAEDDKSLFSGVDYYFIEEDATRFKVSLPFSPYFYILCRKDTFEEVSTFL
FKKYNGILTKIETIYKEDLDLPNHLIGLKQKYLKLSFANIVDLTKVKRDIMRVVRINKQR
EKSKTHYTDMLATTLQSNEQDSNRQNLDHMDNILDIREHDVPHHVRVSIDANIFCGTWYS
VKSRGTEPPIITRKEDIIEPPEPIVLAYDIETTKLPLKFPDATFDQIMMISYMIDGQGYL
ITNRELVSADIKDFEYTPKPEFEGPFTIFNELNEKAVIMRFFDHINEIKPHIFVTYNGDF
FDWPFVETRAAVHNIDMKEKIGFSKNREGVYVSRAAMHMDCLCWVRRDSYLPVGSQNLKA
VAKAKLRYDPVELDPEEMCKLASEEPEVLANYSVSDAVATFYLYQKYVHPFIFALCTIIP
MEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQETEWNKLTKDGHLLDQETYVGGHVEA
LESGVFKHDIPCRFKIIPSAVDELISGVENALKHTIQEEEKVPIDMVTNFDEIIKEVKIK
LKALKDQPLRIENPVIYHLDVGAMYPNIILTNRLQPSAIVNEMDCAVCDYNKPNAPCQRK
MNWMWRGEYLPASLGEFQRIKQQLETEKFPPQFPGGVKRAFHELTTKEQATFQKNRLTEY
CKKAYKKTKITRMEERIQTICQKENSFYVDTVRAFRDRRYEYKALTKVAKRQVEAANKKG
DAADIKSAKSREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCYTGAHIIRKA
REIIEQIGRPLELDTDGIWCVLPASFPDSITVKTTHEKKKEFTVSYPNAVLNFMVKDQFT
NEVYHELVDKDNLTYEIKSENSIFFEVDGPYYAMVLPAAKEEGKKLKKRYAVFNFDGSLA
ELKGFEVKRRGELQLIKIFQASVFESFLKGNTLEECYASVAKDADYWLDLLYSKCANMPD
SELFELISENKSMSRKLEDYGAQKSTSISTAKRLAEFLGDEMVKDAGLACRYIIANKPQS
APVAERAIPLAIFQSEPAVRRHYLKKWLKDFTLYSDDIRDILDWNYYIERLGSAIQKIIT
IPAAMQGLPNPVPRVQHPPWLHKKVSEKNTSHRQKKITDIFSVRVKDTSHTDNIENSCDI
EDLAGPSTSFNTPVVNKRKRHYLDEDETIRAKSWKEALGSPPPMGTTKKERLKWLEFHKK
KWAFQAKQRHQHRQKKSKTNENDEITWGVIRNTNTSTMTGFLRRAQRKLLETPWQIIQLS
ETGEPGMFRMWILVDTQLHQVRLVVPRIFYVNTRKARPDPGSNELWKKSFKSLPRSRPVY
NLYRYSLPESLFQEHSRELLEDLSKPEIEGIYETQMSLEFRAILQLGCVCIVDPRVARKM
ADGADTFILDQLEFKSIAYQPYLKQTESINYIFLYHHWSSNRQRALWGLFLSASKRAHIF
ILDSVASNQLPNMNALYTQERKAILEKNDEDKINKLAKNIQFVVQVETNFQQVCRTLQAA
LTTYKNEGHGATIIINQTALDKTTLTTEMPLLNEFPLVSTHVRDVENLYSTLEWQKIGAK
MMIKHYLKSQQIVELIAEQCRFFHAPIGNVPADPTLFGADLFYARHLHRNNFVLWCSSTE
KPDLGGSENDDNRLLTDFEESSSCAANNPGTYSSVCVELDVESLAVNALLQYHHIHDIDG
TSTFVAFHNQQRPSIQEMAMGGETATIIPSYDEITLCNPAFKTLRSMVNAWLLEVSVYKN
VFADYQLIHFYRWLRSSNALLYDPALRRTLHTYMKKLYIQLIAEFKTLGCIIVFANFNKI
IVCTKKRSVNDALGYVEFVVQTIRNKELFHSIEITYDQCWEYLIWLDLHNHAGIKGQLSK
DNTEEDTENDNDDVPQIIMNWSLMECLPKEAGCQASFNAIIAGYINAVYQCMIETDVNNT
IRPRRRYSQSQSFIAPLGLGALENTAEFAKKLLSGEMSQRLFKITQKIHRNLSEKILSLE
EYPNVDMGGKENIKINPALELIKAVCKVLSLDKEVENEVYNLKANLLRLIGVGSFGDNVE
WKEPCISLVLPEVICKACNHTRDIDLCKDQYCTNENNRHVWKCPICDTAYDNTEIEFSLI
DKLNRKSMGYVLQDLQCRKCKEIKRENMNMLCSCSGEYNNLISRDEVTTYVNICKSIATK
CKMNILAEIVENTKLFTG
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccttgaaaaataccggggccgaccgtcccaacgtgtttaacaagagaaatcta
aaccaagtgaccaatgcgccgggggaaaacgcactaggaagattgctcgagatcaaagag
gacataaggattgacactgtatatggattccgtcgtgtcactgatttcaaggaaagaata
ggatttttgctcaacatgcatgtgacggaaattgcagaggatgacaagagtctgttcagt
ggtgtagattattactttattgaagaagatgctaccagatttaaagtgtcattgccattt
tcaccatatttttatatcttatgtcgtaaagatacatttgaagaagtttcaacattttta
tttaagaagtacaatggaattttaacaaaaattgagactatttataaggaagaccttgat
ttgcctaatcacttgattggtttgaagcaaaaatacctaaaactttcttttgcaaatatt
gtggatttaacaaaagtcaaacgtgatattatgcgtgttgttagaattaacaaacaacga
gagaaaagcaagactcactatacagatatgttagcaactactttgcagtcaaatgaacaa
gatagtaatcgacaaaatttagatcatatggataatattcttgatattagggaacatgat
gtacctcatcatgtgcgagtatccatagatgctaacattttctgtggaacttggtattct
gtaaaaagcagaggtaccgaaccacctataattacacgaaaagaagatataatagaacca
cctgaacctattgttttagcatatgatattgaaactacaaaattgccattaaaatttcca
gatgctacttttgatcaaattatgatgatatcatatatgatagatggacagggatattta
ataactaatagagaattagtctctgcagatataaaagacttcgaatatacaccaaaacca
gaatttgaaggtcctttcacgatatttaacgagcttaatgaaaaagcagttataatgaga
ttttttgatcacattaacgaaatcaagcctcatatatttgtaacatataatggtgatttt
ttcgattggccatttgttgaaactcgagcagctgtacataatatagatatgaaagaaaaa
attggtttctctaaaaatcgcgaaggtgtttatgtcagtagagctgctatgcacatggat
tgtttatgttgggtgaggcgcgattcttatctcccagtgggttcccaaaatctgaaagct
gttgctaaagctaaattgagatatgatccagtggaacttgatccagaagaaatgtgcaaa
ttagcatcggaagagcctgaagtcctcgcgaactattctgtttctgacgctgtggcaaca
ttttatctttatcagaaatacgttcatccctttatatttgcgttatgcacgattattcct
atggagcctgatgaagttctcagaaagggatctggcacactgtgtgaatctcttcttatg
gtacaagcttttcaagctaatattatatttcctaacaaacaagaaaccgaatggaataaa
ttaacaaaagatggccatttactggatcaagaaacttacgtgggtggacacgtggaagcc
ttagaatctggtgtttttaaacacgatattccttgccgttttaaaattataccaagcgcc
gtcgatgaattaatcagtggtgtggaaaatgccttaaagcatacaatacaagaagaggaa
aaagttccgattgatatggtgacgaattttgacgaaataataaaagaagttaagataaag
ttaaaagcacttaaagatcaacctttaagaatagaaaaccctgtaatttatcatttagac
gtaggtgctatgtatcccaatataattttaactaatagattgcagccttctgcgatagta
aatgaaatggattgtgctgtatgcgactataacaagcctaatgctccctgccaaagaaaa
atgaattggatgtggagaggcgaatatttgcctgcaagtttgggtgaatttcaaagaata
aaacagcaattagaaaccgaaaaatttccaccacaatttcccggtggtgttaaaagagct
ttccatgaattgactacgaaagagcaggctacatttcagaaaaacagacttaccgaatat
tgtaaaaaagcttacaaaaaaaccaaaattactagaatggaagagagaatacaaacgata
tgtcagaaagaaaattcgttttatgtagacactgtgagagcatttagagatagaagatat
gaatataaagcattaactaaagttgctaaacggcaagtagaagcagcaaacaagaaagga
gatgctgctgacataaaatctgctaaaagtagagaagttttgtacgattctcttcagctt
gctcataaatgcattctcaattctttttatggctacgttatgagaaaaggagcacgatgg
cacagtatggaaatgggcggcatcgtatgttacacaggagctcatattattagaaaagcg
agagaaattatagaacaaatcggtcgtccattggaattggatactgatggcatatggtgt
gttttacctgcgtcttttccagactccattacagttaagactacacacgaaaagaaaaaa
gaattcacggtctcgtatccgaatgcagttctcaattttatggtgaaggatcaatttact
aatgaagtgtatcatgaacttgtggataaagataatttaacatatgaaattaaaagtgaa
aattcgatatttttcgaagttgatggaccgtattacgcaatggtattacccgctgctaaa
gaagaaggaaagaaattgaaaaaacgatacgcagtttttaatttcgacggttcactagcc
gaattaaaaggatttgaagtaaaaaggagaggtgaattgcaattaataaaaatttttcag
gcctctgtttttgaatcttttttaaaagggaatacgttagaagaatgttacgcttctgtt
gcaaaagatgcagattattggctggatttattgtacagcaagtgtgcaaatatgcctgac
tccgaattgttcgaactcatatccgagaacaagtctatgtcgcgtaaattagaagactac
ggtgcacaaaagtccacgtccatttctacggctaaaagattagctgaatttttaggtgac
gaaatggttaaagatgcaggtttagcttgtagatatattatagcgaataaaccacaaagc
gcaccagttgctgagcgcgcgataccgttagctatttttcaatcggaaccggctgtgcgc
agacattacttaaaaaaatggttaaaggattttacattgtatagcgatgacatcagagat
attttagattggaattattacattgagcgactcgggagcgctatacaaaaaataattact
ataccagcggcgatgcaaggcttaccgaatccagttccacgagtgcagcatccaccttgg
ttacataaaaaagtgtcagagaaaaatacatcccatcgtcagaaaaaaattacagatata
ttttctgttagagttaaggacacttctcatacagacaacattgaaaattcttgcgatatt
gaagatctcgcaggcccatccactagcttcaatactccggttgttaacaagagaaagaga
cattatttagacgaggatgaaacaatcagagccaaaagctggaaggaagctctgggttca
cctcctcccatgggaacaacgaaaaaagagagacttaaatggttggaatttcataagaaa
aaatgggcttttcaagctaaacagaggcatcaacatcggcaaaagaaaagcaagactaac
gaaaatgatgaaatcacctggggagttatacgaaatactaatacatccaccatgactggt
tttttgagacgtgctcaaagaaaattattggaaactccatggcaaattattcaactgtca
gaaacaggcgagcccggtatgtttcgaatgtggatactcgttgatacacaattacatcag
gtacgtcttgtagtacctcgtatattttatgtaaacactcgcaaagcaaggcctgatcca
ggctcgaacgaactctggaaaaaaagtttcaaatccttaccacgctctcgtccggtgtac
aacttgtatcgatattctctgccagaatctttgtttcaagagcacagccgagagcttctg
gaagacttgagtaagccagaaattgaaggaatttacgagacacaaatgtcattagaattt
cgagctatattgcagttgggatgtgtgtgtatagtcgatccgcgtgtcgcgcgaaaaatg
gcagacggagcggatactttcattctggatcaattagaattcaaaagtattgcctatcaa
ccttatctcaagcaaacggaatcgattaactacatatttctttatcatcactggagttca
aaccgtcaaagagcactgtggggcttattcttaagtgccagcaagagagctcacatattt
attttagattcagtcgcatccaatcaactaccgaacatgaatgcgttgtacacacaagaa
cgtaaagcaatattagaaaaaaatgacgaagacaaaataaacaagctggctaaaaatatc
cagtttgtagtacaagtagaaacaaattttcaacaagtatgccgtactttgcaggcagcg
ttaacgacgtataagaacgaagggcacggcgcgacgattattattaatcaaactgctctc
gacaaaacgacattaaccactgaaatgccgcttctcaatgaatttcctctcgtcagcacg
cacgttcgtgacgttgaaaatttgtacagcacgttagagtggcaaaaaataggcgcaaaa
atgatgattaaacactatttgaagagtcaacagattgttgagttaattgcggagcaatgc
cgattctttcatgctcctattggcaacgtacccgcggatcccacgctcttcggtgcagat
ttattctacgccagacatttgcataggaacaattttgttctgtggtgttcgtccaccgag
aaacctgacttaggcggcagcgaaaacgacgataatagattattaacagacttcgaagaa
agctcaagctgcgccgcgaataatccgggaacgtattctagcgtttgcgtcgagttggat
gtagaaagtctagcggttaatgcattattacagtatcatcatattcacgatattgatgga
accagcacgtttgtagcatttcacaatcaacagcgtccatctattcaggaaatggcaatg
ggtggtgagaccgcgacaattattcccagctacgatgaaatcactctttgcaatccggcg
tttaaaacgttgcgaagcatggtaaacgcatggttgctcgaagtatctgtttacaaaaat
gtatttgcagactatcagctgattcacttttatcggtggttgagatcttcaaatgcttta
ctttacgatcctgctttacgccgtactttacacacttacatgaagaagttgtatatacaa
ctaatagcagaatttaaaacattaggttgtattatagtatttgcgaattttaacaaaatt
attgtatgcacgaagaaacgatctgtgaatgatgctttgggttatgtggagtttgttgtt
caaaccatacgaaacaaagaactgtttcatagtattgaaattacatacgaccaatgctgg
gaatatctgatatggcttgatttgcacaatcacgctggcattaaagggcaattatccaaa
gataatacagaagaggacactgaaaatgacaacgatgacgtgccgcaaataataatgaat
tggagtttgatggaatgcctgcctaaggaagcaggatgtcaagcaagttttaatgctata
atagcaggatatataaacgcagtatatcagtgtatgattgagactgatgtcaataatact
ataaggccgagaagaagatacagtcaaagccaatcatttatagcaccacttggattaggt
gcactggaaaatacagccgagtttgcgaaaaaattgttatcaggagaaatgtctcaaaga
ctattcaaaataacacaaaaaatacatcgaaatttatcagaaaagatattaagtctggag
gagtatcctaatgtggatatgggtggaaaagaaaatataaagatcaatcccgcacttgaa
ttaatcaaggccgtatgcaaggttttgtccttagataaagaagtagaaaacgaggtttat
aacttgaaagcaaatttgttgcgattgattggagtcggcagcttcggcgataacgttgag
tggaaagaaccgtgtatttctcttgttctaccagaagttatatgtaaagcatgtaatcac
acgagagatattgatctttgtaaagatcaatattgcacaaatgaaaataacagacacgtg
tggaaatgccctatttgcgatacggcttatgacaatacagaaatagaattttcattaatt
gacaaattaaatcgcaaaagtatgggttacgtattgcaagatttacaatgtcggaagtgt
aaggaaattaaacgagaaaatatgaacatgttatgttcctgttcgggcgaatacaataat
ttaatctcccgggacgaggttacaacgtatgtaaatatatgtaaatcgatagccaccaaa
tgcaaaatgaatattttagcagaaatagtagagaatacgaaactctttacaggttag
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integrated database retrieval system
