Cardiocondyla obscurior: 139109777
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Entry
139109777 CDS
T10704
Symbol
Usp1
Name
(RefSeq) ubiquitin specific protease 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
139109777 (Usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cobs01002
]
139109777 (Usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cobs04121
]
139109777 (Usp1)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139109777 (Usp1)
Enzymes [BR:
cobs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139109777 (Usp1)
Peptidases and inhibitors [BR:
cobs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139109777 (Usp1)
Ubiquitin system [BR:
cobs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139109777 (Usp1)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
139109777 (Usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
139109777
NCBI-ProteinID:
XP_070525202
LinkDB
All DBs
Position
LG18:complement(54470..58086)
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AA seq
646 aa
AA seq
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MTVLETEEDADKRSVPPRKKFCLSLSGRGRAISIVVPQPPPTSTRGGLLDRTDFPFSTNK
MLNGYRNQLSNHQDGNYDVSGTNGEGLKIATLCNLGNTCFLNSVLYTLRFAPSFLHNLHH
LATDLSNLNEKQLQAKAKSSSLGRTGVSLTSSSSRSWSSKDLTLAGSTTEASKPRIQIAT
EKLHELFMALRASEVKENSEPYQPDAFLQALREVNPIFEGNQQQDAHELLVCLLDNIRET
FQLLVRHRESQFGQSNGGFSEFATNHSTTQTQSESSGSGKRNNHKSSKKNKKNTGRGSSA
SLAQPNTNGTVGSARLYENGHAEFAESNGEIGMRKPESKKCFISEDFEGVSLLRTTCLEC
EHVTERKETFCDICVPIDIDRSNEKDDDGELVDSSEVYKRAVVTSELLWGRDKYWCARCL
RYNEARRAVCFPSLPRLLILQLKRFSTAAGSMEKINNHMPTPLTLQCFCEECSNDETHGT
AAGGSTEARHVYKLYSVIMHQGATMTAGHYVAYTRLPDEPAYAEYSQCDRDNKRQNSSQA
STVSTSSSSSSSSSSSDKTSSILYIRSKLFRSKPSASENKEQVVNRVGCRSMDCCGIWRN
KQGVTWLECDDEAVHVIPLRELEDKLAPNARNSATPYLLFYVRSTT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacagtactagagacggaggaagacgcagataaacgctcggttcctccaaggaaaaag
ttctgcctgtccctgtcgggtcgtggacgtgcaatctccatcgtcgtcccacagccccct
cctacatctacacgagggggccttctggatagaacggattttccatttagtacaaacaaa
atgttgaatggctatcgaaatcagctgagcaaccaccaggatggaaattatgatgtatct
ggtactaatggggaaggattaaagatagctactttatgcaatctaggaaacacctgcttc
ctcaatagtgtattatataccttaagatttgcgccttcctttctgcacaatttacatcat
cttgctactgatttgtctaatctaaatgagaagcaacttcaggcaaaggccaaatcttcg
tcattaggtagaactggggtatcgttaacgtcaagcagtagtcgtagctggagtagtaaa
gatttgacattagctgggtcaacaacagaggctagtaagccacgtattcaaatagctact
gaaaagttacatgagctctttatggcattgcgagcatcagaagtgaaagaaaacagtgaa
ccttaccaacctgatgcttttttacaagctcttagagaagtaaatccgatatttgaagga
aatcagcaacaggacgcgcatgagcttctggtctgcttgctagacaacattagagaaact
tttcaattgcttgttagacacagagaaagtcaattcggtcaaagtaatggcggtttttcc
gaatttgccactaaccattctactacgcaaacacagtcggagagcagtggttctggaaaa
aggaacaatcataagtccagcaaaaaaaataagaaaaatacaggcagagggagttcagcc
tctcttgcacagccaaatacaaatggcaccgtaggatctgcaagattgtatgagaacggt
catgcagagtttgctgagagtaatggcgagatagggatgcgtaaaccagagagcaaaaag
tgttttatttctgaggatttcgagggtgtcagcctattgcgcacaacgtgtcttgaatgc
gaacacgtaacagaacggaaggagacattttgcgatatatgtgtacctattgacattgat
cgttcgaatgagaaagatgatgatggtgaattagtagatagcagtgaggtatacaaacgc
gctgtagtaactagtgaactgctttggggtagggataaatactggtgtgcacggtgccta
cggtataatgaggctcgcagagccgtatgttttccctcattacctagactccttatcttg
cagttgaaaagattttctactgccgctggttcgatggaaaaaatcaataatcatatgcca
acaccgcttactttgcaatgcttttgcgaggaatgcagtaacgacgagacccacggaacg
gcagctggtggtagtaccgaggcgcgacatgtgtacaaattatattcggtcataatgcac
caaggtgctacgatgaccgccgggcattacgtcgcttacacacgtttacccgatgaacct
gcgtatgcggagtattcccaatgcgatcgcgacaataagcggcagaattcgagtcaggcg
agcactgtgagcacaagttcgtcgtcgtcgtcttcctcctcttcctctgacaaaacatcg
agtatactctacatcaggagcaagcttttcaggagtaagcccagcgcgagcgagaataag
gaacaagtggtgaatagggttggttgtcgtagcatggactgttgcggtatctggcgaaat
aagcagggcgtcacttggctagaatgcgatgacgaagcagtacatgtgatcccgctacgg
gaactcgaagacaaattggcgcccaacgcgcggaactccgccaccccctatctcttattc
tatgtaagatcaacgacgtaa
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