Cardiocondyla obscurior: 139109818
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Entry
139109818 CDS
T10704
Symbol
Beta'cop
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139109818 (Beta'cop)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobs04147
]
139109818 (Beta'cop)
Membrane trafficking [BR:
cobs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139109818 (Beta'cop)
Exosome [BR:
cobs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139109818 (Beta'cop)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
NBCH_WD40
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_LRRK2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
139109818
NCBI-ProteinID:
XP_070525274
LinkDB
All DBs
Position
LG18:complement(4170216..4175634)
Genome browser
AA seq
944 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLCSLYQGNVNIWNHETQTLVKTFEVCDLPV
RTAKFVPRKNWVITGSDDMQIRIFNYNTLERVHSFEAHSDYVRCIAVHPTQPFILTSSDD
MWIKLWNWEKSWICQQVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSPTANFT
LEGHEKGVNCVDYYHGGDKPYLISGADDKYVKIWDYQNKTCVQTLEGHSQNISAVCFHPE
LPIVLTASEDGTVRIWHAGTYRLESSLNYGFERVWTIACMRGSNNVAIGYDEGSVMVKVG
REEPAVSMDSLGGKIVWARHSEIQQVNLKALGEEAQDGERLPLAVKDMGACEIYPQTIQH
NPNGRFLVVCGDGEYIIYTSMALRNKAFGQASEFVWAADSSQYAVRESNTTVKVFKNFKE
KKSFKPDFGADGIFGGFLLGVSSGSGLSFFDWDTLKLVRRIDIQPTHVYWAENASLVALA
TSDQYFILKYQADAVANATENAEDIENAFEMLAEMNEVVKTGLWVGDCFIYTNSVNRINY
FVGGEVVTVSHLDRPMYLLGYVPRDNRLYLCDKELSVVSYSLLLSVLEYQTAVMRKDFET
ANRVLPTVPKEHRTRVAHFLEKQGFKEQALAVSTDPEHRFELALALGNLATAHTLAKEAN
SQQKWRQLSTLATQKGRLCLAQECLHQAQDFAGLLLLATSTGNADMIQKLGSAADEAGKN
NISFMSNFILGDVDKCIDILIKTDRIPEAAFFARTYAPSKISSIIKLWKEKLSAVSEKAG
QSLADPEQYENLFPGYREALKVEKFLREESKKRIPASAFPTVTPNTERKPFEEMSAAEQL
GTFQYTTNLNETFENCSEKLDEGIEESAIDRLQNLSISNLKDNLFLNKASTSSTKSEVPE
KTTTKPTSNTRPLMVDDDDIDIDLEIDDNIDTSGVNLDDDLLED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcctctaagattagacatcaaacggaagctgacggccaggtcagatagagtcaaaagc
gtggatcttcatccaaccgagccatggatgctgtgctcgctgtaccagggcaatgtcaac
atttggaatcacgagacgcagaccctggtgaagacgttcgaggtgtgcgacttgccggta
cgaacggcaaagtttgtcccacgcaagaactgggttattactggctcggacgacatgcag
atcagaatatttaattacaatactttggagcgagttcactcattcgaagctcacagtgat
tatgtcagatgtattgccgtgcatccgacacaaccgtttatacttacaagcagtgatgat
atgtggataaaattatggaactgggagaagtcttggatttgccagcaagtatttgaaggt
cacacgcattatgtcatgcagattgtatttaatccaaaggacaataacacttttgccagt
gcatccctagacagaactgtcaaagtatggcagctcggttcgcccacggctaattttacc
ttggagggccacgaaaagggtgttaattgcgtggattattatcacggtggggataaaccg
taccttatatcaggagctgatgacaaatacgttaaaatatgggattatcaaaataaaacc
tgtgtacaaactctggagggtcactcgcaaaatatttccgcggtctgttttcatccagaa
ttgccgatcgttctcacggcctcggaagacggtacggtaagaatatggcatgcgggtacg
taccgattggagtcttcgcttaactacggtttcgaaagagtctggaccatagcgtgcatg
cgaggttcaaacaatgttgccattggatatgacgagggaagcgttatggtgaaggttggc
cgggaagaaccagctgtgtcgatggactcgttgggcggaaagatcgtgtgggcacgccac
agcgagatccagcaagtgaacttgaaagcgttaggtgaagaagcgcaggatggagagcgg
ctaccgttggccgtcaaagacatgggcgcctgcgagatatacccacagactatacaacat
aatccgaacggacgatttttggtggtctgcggcgatggcgaatatatcatatatacatca
atggcattaagaaataaggcattcgggcaggcctcggaattcgtatgggcagcggactca
agtcagtacgcagtaagggagagcaatacgacagtgaaggtctttaaaaacttcaaagaa
aagaaaagtttcaagccagattttggagcggatggtatttttggtggatttttacttggt
gtatcgtctggatctggcctctctttctttgattgggatacgttaaaattggtacgtcgt
atagacatacagcctacgcacgtatattgggccgaaaatgcctcgttggtagcattagcc
acgtcagatcaatattttatactaaagtatcaagcggatgcagtcgctaatgccacagaa
aatgctgaggatattgaaaatgcatttgagatgttagcagagatgaacgaagtagtgaaa
actggcttatgggtcggcgattgttttatttataccaacagcgtcaatcgtattaattat
ttcgtcggtggagaagtagtcactgtctcgcatctcgatagaccgatgtacttgctagga
tacgttccaagagacaatagactatatctttgcgataaagaactctctgtcgtatcgtat
tctttgcttttgtcagtactagaatatcaaactgcagttatgcgaaaagattttgaaact
gccaatagagtattgccgactgttccgaaagaacatcgaacgcgagtagctcacttctta
gaaaagcagggtttcaaagaacaagctttagccgtatcgacggatcctgaacatagattc
gagctggcactcgcactaggaaatcttgcaaccgcacatactctcgccaaggaagcgaac
agtcagcaaaagtggcgacagttatcaacccttgctacacaaaaagggagactctgtttg
gctcaagaatgtctgcatcaagcacaagattttgctggtttattgttattagctacaagc
acaggaaacgcggatatgatacagaagcttggctctgcggcagacgaagcgggaaagaac
aacatttcctttatgtcgaatttcatattgggcgacgtggataaatgtattgacatttta
atcaagacggacaggattcccgaagccgcattcttcgccaggacatacgcacccagtaaa
atctcctctattattaaactatggaaagaaaaactctcggcagtgagcgagaaagctgga
cagagtttagcggatccagaacagtacgaaaatcttttccccggatacagagaagcctta
aaagtggaaaagttcttacgggaagaaagcaagaaaaggattccagcttctgcatttccc
actgttacgcctaataccgagagaaaaccatttgaggaaatgtcggccgctgagcagctg
ggaacatttcaatatacaacaaacttaaatgagactttcgaaaactgctcagagaaactg
gatgagggaatcgaagaaagcgcgatcgacagattgcaaaatctttcaatatcaaactta
aaggacaacctctttctaaataaagcatctacatctagcacgaagtcagaagtacctgag
aaaacaacgacaaaacctacaagtaataccagacctctcatggtagacgacgacgatata
gacattgatctggagattgacgacaatatcgatacttcaggtgtcaatctcgatgatgat
cttctcgaggattaa
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integrated database retrieval system
