Cardiocondyla obscurior: 139109827
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Entry
139109827 CDS
T10704
Symbol
Wda
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139109827 (Wda)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139109827 (Wda)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139109827 (Wda)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139109827 (Wda)
Coactivators
SAGA/TFTC/STAGA complex
139109827 (Wda)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139109827 (Wda)
STAGA complex
139109827 (Wda)
TFTC complex
139109827 (Wda)
SAGA complex
139109827 (Wda)
SLIK complex
139109827 (Wda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_like
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_DCAF12
RMC1_N
Ge1_WD40
Mala_s_1-like
Cytochrom_D1
Beta-prop_WDR35_TULP_N
DUF5888
RHG29_45_N
Motif
Other DBs
NCBI-GeneID:
139109827
NCBI-ProteinID:
XP_070525289
LinkDB
All DBs
Position
LG18:4130387..4134050
Genome browser
AA seq
588 aa
AA seq
DB search
MKMKRMKSEVISATIESYLKRRHYQENVVYRKGDQLFYQNGDQTIVTATTECGTSQDNSI
IFSAISIDTVAANQAYQRFKKWINTILNEKIKIELLSLLYPIFCHLYLEMLHTGNREAAT
DFLKTHQNEFINETEKDFLEELSSVFSVQDIELRPLVNAFRTRKYKVDLSESAHICLRQY
LTKYGHIILMQIVNTHITIIRKVESPQMDEVPEEKSQRYEASINGHMEQPSGTGVDREMR
ELQEAIRLIQNNAHQPLRLFTVKNAIENASCGFIAPKMDKLAVGFSTAEIRLWGIGETVL
VKTKDKQTCVSSVCDISPFYKFNEQESTVKSEAGAIILRGHTDVVHDLRFIPEVDVLLSV
SSDKDMRAWRLNNYSCTAIYSGHNYPIWCMDTSVFNLYIATGSHDRTAKLWSLDRTFPLR
IFAGHFLDVNCIKFHPNARYLATGSADKTIRLWSKDDGNLLRVYVGAQSTIYTLAFSPDG
KYLAASGDDKSISIWDLATNGLLTELKGHKDTVMNVDWSLDGQYIASASLDGIVRLWPTQ
DFIKTLNGGSSSAVSQSEASQIYPTYCSSILSLNYYKKNNSLICIGTK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagcgtatgaagagcgaggtgatcagcgcgacgattgagtcttatctgaaa
cggcgtcactatcaggaaaatgtcgtttaccgcaagggcgatcagttgttttatcagaac
ggcgatcagacgatagtaaccgcgaccacggagtgcggcacctcgcaggacaactcgatc
attttcagtgccatttccattgacaccgttgcggcaaaccaggcttatcagcggtttaaa
aaatggataaacaccattctcaacgaaaaaataaaaatagagttgctgagtcttttatat
ccaatattttgccatctttatttagagatgttacatactggtaatcgagaggctgctact
gattttcttaagacacatcagaatgaatttattaatgaaacagagaaagattttttagaa
gaactatccagtgtattttcagtacaagacattgaattgagacctttagtaaatgcattt
agaactagaaaatataaagtagatctatctgaatcagctcatatttgcctgagacaatat
cttaccaaatatgggcacataatattaatgcagattgtaaatacacacatcacaataatt
agaaaagtggaaagtcctcaaatggatgaagtacctgaagagaaaagtcaaagatatgaa
gcaagtattaatggtcatatggaacaaccatctggtactggtgtagatcgtgaaatgaga
gagttacaagaagccataagattgatacagaataatgctcatcagccattgagattattt
acagtgaagaatgctattgaaaatgcaagttgtggttttattgcacctaagatggataaa
ctagctgtaggtttcagtacagctgaaatacgattgtggggtataggtgaaacagtcctg
gtcaaaacaaaagataagcaaacatgtgtttcatctgtctgtgatatatcacccttttat
aaattcaatgaacaagaaagcacagtaaaaagtgaagcaggagcaataatattaagaggt
catacagacgtagtgcacgatttaagatttattccagaagtagatgtacttctttctgtg
tcgagcgacaaggatatgagggcatggagactcaataattattcatgtacagcaatatac
agtggtcataattatcctatatggtgcatggataccagcgtgttcaatttatatattgct
acaggttcacatgatagaactgcaaagttatggtcattggatagaacatttcctttaaga
atattcgctggtcattttctagatgttaattgcataaaatttcatccaaatgcaagatat
ttagcgactggttccgctgacaagacgataaggttatggtcgaaagatgacggaaatttg
ttacgagtttacgttggagcgcagtcgactatttacactttagcttttagcccagatggc
aaatatttggcagcttcaggtgatgacaagtccatatccatatgggatttagcaactaac
ggtttactgactgaattaaaaggccataaagatacagtcatgaatgtagactggagtttg
gatggccagtatatcgctagtgcaagcctagatggaatcgtacgattgtggcctactcaa
gatttcattaaaacattaaatggaggatcttcaagtgctgtgtcgcaatcagaggcgtca
cagatttacccaacgtattgctcaagcattctctcattgaattactataaaaaaaataat
tctttaatttgtattggtactaagtaa
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