Cardiocondyla obscurior: 139109898
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Entry
139109898 CDS
T10704
Symbol
Rhogef2
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139109898 (Rhogef2)
Membrane trafficking [BR:
cobs04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139109898 (Rhogef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
RGS-like
PDZ
C1_1
PDZ_6
PDZ_2
RGS
PH
PH_13
DUF7809
MAP3K_TRAF_bd
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
139109898
NCBI-ProteinID:
XP_070525412
LinkDB
All DBs
Position
LG19:105973..128054
Genome browser
AA seq
1694 aa
AA seq
DB search
MNGTAALRRSVGAGAGTISGAVEPAPIATLVVYKDDAGFGMKVSGDNPVYVQSVKEGGAA
ARAGLHAGDKIIKVNGVNVMQSTHTDVVQLIKSSTQVVLTVQQKPTSSGAAATIATATTA
TATSGLQVGIIGGTSQQYQRPVSLSAAGTMSPSQPATSLHRASTAPAGGAPCTTTRITAP
QPVDLEKKRQLETQRVHTFQLMLEKEQSYVDKLRSELAKAGTSNSNINVTSVQAELAGAE
RRVRTLQEQLAAISTANEQLCSLVTNTLCSSGYCPPSNNGSGADVPPPLPSRKSLSMQSL
SPPPLPPRPPPAMQNTVQPELDRHLIHLTPSTVNQGISNSFSQDADLSASSALSKHQRTK
SSPEQLGTTALSPSEASRRLIASESMNDLLPPRHVRHNDIDVNELPRVTPPGTPPPPYPA
PVLGQDIFSSTLEDALAIDIIPGLPAFQQPIMSMEEDDVSDQEIGQLEDHGPFQSLSRLW
GHHAHLAVFINYVLSNSDPSSLLFYLVTDLYKEGNAKEMKKWAYEIYSSFLAPGAPLRLH
NVDETIAIEIHDVLLKESDKEEILRKIFYKPRTKAKEELNEQLMHFQQKRTAGLATIFGP
TDISLDESISDKARETKIIETYLLPKMEPYLEDIEKDNVDLRLFTTAASLATILIKIFQL
RPVWADRVPTFVAKDKSNIKARLLTGRSRKMTIKGHHFVAHQYFTTTYCNHCQNLIGGIG
PQGYLCSDCSLSVHRQCVRVLDENCLGPLVRKEKANDRISKLMERIRPERKPPSSHHHSQ
NQTSHHDKMKKSEEDCGALTDGENGEHRIGLAGNTRNNCDRMRISSLGGIVDHADTMDNP
SSREDISEMVQQNISSKPKTSNINRSESYKERIHHKRQLREKRKTSDPNLSKTKVDCSDC
EQPSGTFPGNSAASSSNSSLSTRSLDSPSSSLEQVHPTSSAANASTSWDSDVDVEADPPD
WSQAVPEDVLTQLSNSEKKRQDVINELFHTERSHVRALKVLSHVFHKPLLESQVLPLDQI
QLLFSNLDEMLMIHSRFNQTMKRKKKENPCVSDVGEVLLEMFDGEAGEMFEKAASIYCAK
QQVALDALRDRRRKDSKLNSFLNEIEANPLCRRLQLKDHILTGMLRLTKYPLLFENLAKY
TPDNNEKEKAAILRSLERSKEILSRVNQAVKEAEDHQRLTEIQRTIDRSAFDKFDHPTVQ
EFKNLDITKRKLIYEGPLQWRRTEPNRSMPNRSVPKPVDLHVVLLDDTIFFLHRQDDKYL
LKFINTTNQAGNSVLSPIVKLSTVLVRHNAAEKDSLYLVNTSQNGAQMYNLVAPSSAERK
LWCKHISEAVEAYKARDRQGRRPTPSTTLSEEPTQSMEDASSSGMEADGLIIEKDQPQNR
ESKDLGQSTTDMQDHDEEMPETITATGTSTVEQTQRIQSSESPTTGLAEPLRMVTCTQLS
LIDPLEVHVELPPVHVAEPVLTPIECLRRKDEVIKQALLEKQSLMADILNIPKEDFEHVA
DMASEPSPVEKEPAELILAAINQTDQLMGMLNSALNVSETETIFATRGTSTQSSPACEAT
GCPSLRSHSHSQQSVMGMMQPICHYLTSQLSQLSQLLEIIKDREEEREKLRKELRRNRER
VHALDTDVQRREFSEMMTVTTHTQTMLDDVVHHDNCTSDFAHHDQEFTDAHRETAPDGES
ENLEKTEVMGDSVG
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaacggcagcgctacgacgcagcgtcggggctggtgcaggcaccatcagtgga
gccgtcgaaccagcacccatcgccactctagttgtatacaaggacgacgctggatttgga
atgaaagtttctggtgacaatccagtttacgttcagtctgtgaaagaaggtggtgcagcg
gcaagagctggtcttcatgcaggtgacaaaataattaaggtgaatggagtcaatgtaatg
cagtccacacatactgatgtggttcaacttataaaatcatcaactcaagtagtattaacg
gtacaacaaaaaccaacgtcaagcggcgcagcagcaacgatagcaacagcgaccacagca
acagccacgtccggtctgcaggtcgggataatcggaggtacgagtcaacagtatcaacgc
cctgttagtttatcggcggctggaaccatgtcgccttcgcaaccggcgacttcccttcat
cgagcatctactgcaccggcgggcggtgctccgtgtactactactcgaattacggctccg
caaccagttgaccttgaaaagaaacggcaactggaaacgcagagagttcacacattccag
ctgatgttggaaaaggaacaaagttacgtagataaattacgaagcgagttggcaaaagct
ggtaccagtaatagtaacatcaacgtcacgtctgtgcaagcagaactggcaggtgctgag
agaagagtacgcacattgcaagaacagcttgcagcgattagcacagcaaacgaacagctt
tgctcattggtaacaaacaccttgtgttcttcgggttattgtccaccctcaaacaacggc
agtggcgcagatgtgccgcctccactgccgtcgcgcaaatccctatccatgcaaagtctc
tctccgccgcctttgcctccccgacctccacctgccatgcaaaatacagtccaaccggag
ctggaccgacatctgattcacttaacgccttcaacagtcaatcagggtatttctaactct
ttttcccaagatgcggatttaagtgcctcaagcgcgcttagtaagcaccaacgaacaaag
tccagcccggaacaattgggaacgactgcgctgtccccgtcggaggctagtagacgttta
attgcttccgaatcaatgaatgatttattacctccacgacacgtcaggcataatgatatc
gatgttaatgaattgccacgtgttacgccaccagggactccgccaccgccatatcctgct
cctgttctagggcaagatattttctcgtccacattagaagatgcacttgcgattgatatc
attcctggactgccagcgtttcaacagccaattatgtcaatggaagaagatgatgttagc
gatcaggaaatcggtcaattagaagatcacggcccgttccaatctttatccaggctgtgg
ggacatcacgcgcaccttgctgtatttattaattacgtattatctaatagtgatccttct
agtttgttgttttacttagtaaccgatttgtacaaggagggaaatgccaaagagatgaag
aaatgggcatacgaaatttattctagttttctagcacctggtgcaccgttacgtctgcat
aatgtggatgagactattgcaattgaaattcacgatgttctgttgaaagaatctgataaa
gaagaaattctcagaaagatattttataagccacgtactaaagcaaaagaagaattgaac
gaacagctgatgcactttcagcagaaaagaactgcaggactagccacaatctttggccca
actgacatttcacttgatgaaagcatatccgataaagcgcgtgaaacaaaaattattgag
acgtatcttttgccgaaaatggagccttatctggaagatatagaaaaagacaacgtagat
ttgcgacttttcacgacggcagctagtctggctaccatattaataaagattttccagttg
cgaccggtatgggccgatcgagtgcccacctttgttgcaaaagataaatctaacatcaaa
gcacggttacttactggaagatcacgtaaaatgacaattaaagggcatcatttcgtagcg
catcagtattttacaacgacttactgcaatcattgtcaaaatcttatcggcggaattggt
cctcaaggatatttatgcagtgattgttccctcagcgtgcatcgacaatgtgttcgtgta
ttagatgaaaattgtcttggacccttagtgcgaaaagaaaaagccaatgatagaattagt
aaattgatggaacgtatccgaccggagaggaagcctccatcgtcccatcatcattcccag
aatcaaacgtcgcatcacgataaaatgaaaaagagtgaagaagattgtggtgcattaaca
gatggagaaaatggagagcatcgtataggtttggccggtaacactcgcaacaattgtgac
agaatgagaatttccagtttaggaggaatcgttgatcatgcagatactatggataatccc
tcgtcgcgagaagatatttccgaaatggtccagcaaaatatttctagtaagccaaagacg
tcaaacatcaacaggtctgaaagttataaagagcggatacatcataagcgacaattaagg
gaaaagagaaagaccagcgatccaaatctttcgaaaacaaaagtcgattgcagtgactgc
gaacaaccgtccggcacatttcctgggaactcggccgccagttcgtcaaacagtagcctt
tcgacgaggagcctggatagtcctagttccagtttggaacaggtacacccgacttcatcg
gcggcaaacgcgtcaacctcttgggacagtgatgttgatgttgaggctgatccgccggat
tggagtcaagctgtgccagaggacgttcttacacaactcagtaactctgagaaaaagaga
caagatgttattaatgaattgtttcacaccgaacgctctcatgttcgcgcgctgaaagta
ctttcacatgtcttccacaagcccttgctggaatctcaagtgctgccattagatcagatt
caattgctgttctctaatttggacgaaatgctcatgatacattcacgttttaaccaaacg
atgaaacggaagaaaaaggagaatccatgcgtgagcgacgtgggtgaagttctgctggaa
atgtttgacggcgaagctggcgagatgtttgagaaggctgcgtcaatttactgcgctaag
cagcaggtagcactggatgctttgcgcgatcgccgacgtaaggattccaagttaaattct
ttcctaaatgagatagaggcaaatccattgtgtcgccgtctacaattaaaagatcatata
cttaccggtatgctgcgacttacaaagtatccgctgctctttgaaaatctcgctaaatac
acgccggataataatgaaaaggaaaaagcagctatattgcgcagtctcgaacgcagtaaa
gagattttgagtagagtcaaccaagcggtgaaagaggccgaggatcaccaacgactgacg
gaaattcagcgaacgatcgatcggtcggcctttgataagtttgaccatccaaccgtgcaa
gaatttaaaaacctcgatattacaaagcgcaagttgatatatgagggaccgctgcagtgg
cgacgtaccgagccgaatcgatcaatgccaaatcgctcggtgccgaagcccgttgactta
catgtagtattacttgacgatacgatcttctttctgcatcggcaagacgacaagtatttg
cttaaatttatcaatacgaccaatcaagcgggtaattccgtgttgagtccgatcgtaaag
ctgtccactgttctggtgcgtcacaacgccgccgaaaaggactcactttatcttgtcaat
acctcgcaaaatggcgcacagatgtacaatcttgtagcaccgtcctcggcagaacgcaag
ctttggtgcaagcatatctctgaggctgtcgaggcctacaaagcgcgtgatcgtcagggt
aggagaccaacaccttccaccacgctatcagaggagccgacgcaatcaatggaagacgcc
tcgtcatccggaatggaagccgatggattaattattgagaaagaccagccgcagaatcgg
gaatcgaaggatctcggacaaagtactaccgacatgcaagatcatgacgaggaaatgccg
gaaactattaccgctacgggaacttctacagtcgaacaaacgcaacgaatacaatcatct
gagtcgccaacgacaggtctagcagagcctttacgaatggttacgtgtactcaattatca
ttgatagatccattggaagttcatgtggaattaccaccagtacatgttgcggaaccagtt
cttacaccgatagaatgtttaaggcgtaaagatgaagtaatcaaacaggctttactcgaa
aagcaatcattgatggcggacatattaaatattcctaaagaagatttcgagcatgtggcg
gacatggcatctgaaccgtcaccggtggaaaaagagcctgctgaacttatacttgctgct
attaaccaaactgatcaattaatgggaatgttaaactctgcattaaacgtaagcgagacg
gaaacaatatttgcgacacgtgggacatcgacacaatcttctcctgcgtgcgaagctact
ggttgcccttcactacgaagtcattcacattctcagcaatcagttatgggaatgatgcaa
ccgatttgccactatctcacatctcagctttcacaattgtcgcaacttctggagattata
aaagacagagaagaagaaagggagaaactgcggaaagaattacgaagaaatagagaacgt
gttcacgcgcttgacactgacgtgcagcgtcgtgaattttcggaaatgatgaccgtgaca
actcacacgcaaacaatgctcgatgacgtagtgcatcatgataattgcaccagtgacttc
gctcatcatgatcaggagtttactgacgcacatagagaaacggctccagacggagagtcg
gaaaatcttgaaaaaaccgaagttatgggcgacagcgttggttga
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integrated database retrieval system
