KEGG   Cardiocondyla obscurior: 139110193
Entry
139110193         CDS       T10704                                 
Symbol
Lis-1
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs00565  Ether lipid metabolism
cobs01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    139110193 (Lis-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cobs03036]
    139110193 (Lis-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cobs04147]
    139110193 (Lis-1)
Chromosome and associated proteins [BR:cobs03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    139110193 (Lis-1)
Exosome [BR:cobs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139110193 (Lis-1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EML NBCH_WD40 Beta-prop_SCAP WD40_RFWD3 Beta-prop_Nup120_160 LisH_PAC1 Beta-prop_Vps41 Beta-prop_RIG_2nd eIF2A Beta-prop_DCAF4 Beta-prop_DCAF12 LisH Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Nucleoporin_N WD_LRWD1 Beta-prop_WDR11_2nd Pox_A_type_inc
Other DBs
NCBI-GeneID: 139110193
NCBI-ProteinID: XP_070525924
LinkDB
Position
LG19:complement(653720..666837)
AA seq 410 aa
MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIR
LQKKVMELESKLSEAEKEFIEGAPTRGKRSPSEWIPRPPEKFCLSGHRAPINRVIFHPVF
SLVVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDVSGKLLASCSADMSIKLWDFH
QSFACVKTMHGHDHNVNSVAFMPQGDFVVSASRDKSIKIWEVATGYCVKTLTGHREWVRM
ARVSPCGELIASCSNDQTVRVWHIATKETKVEFREHEHVVECIAWAPENARASINAAAGA
DNKGAHEGPFLASGSRDKMIRVWDVGAGVCLFSLIGHDNWVRCIVFHPGGKFIVSASDDK
TLRVWDTRNKRVMKTLEAHLHFCTSVDFHKNHPYVVTGSVDQTVKIWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgaaaatggtgctgtctcaacgtcagagggaggagttaaataaggcgatcgcggattac
cttagcacgaatggctaccaagatgcattggaggcgtttaagaaagaagccgatatgccg
ggagaagtggaaaggaagtacggaggcctcttggagaaaaagtggacttcagttatacga
ttgcagaaaaaggtaatggaactggaatccaaactttccgaggctgagaaggaattcata
gaaggcgcaccaacgcgcggcaagagatcgccatccgaatggataccgaggccgccggag
aagttctgcctatccggacacagagctcctattaatagagttatttttcatccggttttt
agtcttgtagtatctgccagcgaagatgcgaccattaaggtatgggactttgaaagcggc
gatttcgaaagaacgttgaagggccacaccgacagtgtgcaggacatcgcgtttgatgtc
tcgggcaagctgctcgcttcctgcagcgcggacatgtccatcaagctgtgggatttccat
cagtcgtttgcttgtgtcaagaccatgcacggtcacgatcacaacgtcaactcggtcgcg
ttcatgccgcagggtgacttcgttgtgagcgcctccagggataagagcattaaaatctgg
gaagtggcgacagggtactgtgttaagacgcttacagggcacagagagtgggtgagaatg
gcgcgagtcagcccttgcggtgagctcattgccagttgctccaacgatcaaactgttcga
gtgtggcacatagcgacgaaggaaacaaaggttgagttcagagaacacgaacatgtggtg
gagtgcatcgcatgggcgccggaaaacgcgagagcgtcgatcaatgcggcagccggagcg
gacaacaagggcgcgcatgaagggcctttccttgcttccggctcacgagacaagatgatc
cgtgtgtgggacgtcggcgctggagtatgtctttttagccttatcgggcacgacaactgg
gtgcgatgcatcgtcttccatcctggtggcaagtttatcgtcagcgcatccgacgataag
acgctgcgagtctgggacacgcgtaataagcgagtgatgaagacgctcgaagcgcacctt
cacttctgcacttctgttgatttccacaagaatcatccttacgtggtcaccgggagcgtc
gatcaaacggtgaagatttgggagtgccgctag

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