Cardiocondyla obscurior: 139110499
Help
Entry
139110499 CDS
T10704
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139110499 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139110499 (Usp39)
Spliceosome [BR:
cobs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139110499 (Usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
139110499
NCBI-ProteinID:
XP_070526435
LinkDB
All DBs
Position
LG20:3136434..3138994
Genome browser
AA seq
508 aa
AA seq
DB search
MASDVRGTQLKRKLVDTGSDSDNETEKSTKSMRTKSDGPRLCPYLDTINRQFLDFDFEKL
CSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIVD
SSLDDIKYVLNPTFDKLQISQLDKSDKQSRAIDGSMYSPGIVGMNNIKANDYCNVILQAL
SHVTPLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIPPL
ELEESQRSELLNTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFN
AVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTRNTFFVEKNPTIVNFPVKNVDFGDI
LTPEVKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDLHVTQILPQMIT
LTEAYIQVYELKKETHMENGDNKNKKII
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacgtccgaggtacacagctgaaacgaaaactggtcgataccgggagcgac
tccgacaatgaaacggaaaagagcacaaaatcgatgagaactaaatcagacgggccacga
ctgtgtccgtacttggacaccatcaatcggcagtttctagattttgattttgaaaaattg
tgctctgtatcactgtctaggataaatgtatatgcttgtctggtatgtggcaaatacttt
caaggacgtggaaccaatactcatgcttatacacacagtgtggcagagagtcatcatgtc
tttctcaacttgcacacgctcaaattttattgtctgccagataattatgaaatagtagat
tcatctttggacgatattaaatacgtgttaaatccaacttttgacaagttgcaaatatcg
caattagacaagagtgacaagcagtcaagagcaattgatggttccatgtattcaccagga
atagtgggaatgaataatataaaagcaaatgactactgtaatgttattttacaagcactt
tcacatgttacacctttaagagatttttttttaagagaatctaattattctcatgtaaga
aggccaccaggtgattcatcgtatctcttagtacagaggtttggagagctcatgcgcaaa
ttatggaacccacgtaatttcaaagcgcacgtaagtcctcacgagatgctgcaagcggtc
gttttgtggagtaaaaaaagatttcagtttacggaacaaggtgatcctgtggattttttg
tcttggtttttaaatgctcttcatctagcgttaaacggtacaaagaaacgtgattctagc
ataatttataaaacctttttgggtcatatgcgaatatatacgcggaaaattccaccgctg
gaactggaggagagccaaagaagtgagttattgaatacagtggaatatggtgaaactgtt
acggaaagtccatttctatatctcacttgcgatcttccgccaccgccgctattcaaagat
caatttacagaaaatattattccacaagtaaacttgtacacgcttctgaataaatttaat
gctgtcaccgaaaaggaatataaaacctacaaagaaaattttatgaagagatttgagatt
actgaactgccaccgtatcttatactttacataaaaagatttacaaggaatacatttttc
gttgagaaaaatccaacgatcgtgaactttcccgttaaaaacgtcgattttggagatatt
ttaacaccggaagtgaaagccaagcatccgtatacgacgtacgatttagtagctaatata
gtacacgacggtgagcctggccaaggaacttacagagttcacattttgcatagagccact
ggacagtggtacgaattgcaagatttacacgttactcaaattttgccgcaaatgattacg
cttacagaagcatacatacaggtttatgaattgaaaaaagagactcacatggaaaacgga
gacaataaaaataagaaaattatatga
DBGET
integrated database retrieval system
