Cardiocondyla obscurior: 139110584
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Entry
139110584 CDS
T10704
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139110584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139110584
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
139110584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
139110584
NCBI-ProteinID:
XP_070526517
LinkDB
All DBs
Position
LG21:891876..899302
Genome browser
AA seq
1089 aa
AA seq
DB search
MIGTACSLEDACQQAQDMIGLVSRCWKNAQGQNSLVLTSDKSLSSQKKEQNHSRHSIQSK
LTRLYFEELSKVPHATPDSVLNNLENECDLLGRLVQRESLNTLIVNLYAGNKGYSLAVRN
SDKGNQYDKNSLAETQLMGYEQGELLSCIDNGQLPAMLAEQLECSFSHLFYDGCIIAEVR
DYRRSFLHNRAEIHHVLLKPTTQSVLSDVSTLTSDGDWSHEDRLMLESHLVAATQGPLCL
DPNPIPTLASTRIKQSKSLLTDHQLMRQAKKFSQVTVNRKRKLEQLAQPEGQTIHDLMLK
FRAERRGLATNTACPPPSLKIPELPPPKQTDVLRFAKLYERPRETKDCSPQVIEEYILEP
AESKDYIKLSILQRPATSEYLGELYMDKNRDGERNGSSCRFTLGTRAVANHYYQQFKEIF
TEEGRKNVKIRHIIPGQTPRISCTPAMQRAHQQAQQAKAAQLAAQQLQQVQSPHVTQQIL
SRAQGQLTNLASQVASMKAMTEATTTSAQNNLTCVDSASMPQVIQHNDITALSSGQSLAN
GGLNASTSAQIDNSAMTVADNTCNGSGILVFQKSAGTINNTASANVPVLQAQLQAGTQNC
ISEPASQSHNEPPFKKHSNNPAINALVNSLMNSAQQFQQQAAANAAAAAMNNNAQATNKS
NNTAILSLLNSTPANIAQRKVQPQRISLNTSIPPKIISHGNVINVPSTTGQVRVSLNSSA
LTGQLSCKQQPVKTTTVRLARVQDPTSTLGLSMPGLSALLAGTPSADNPIPGMNSTSSLL
ERLTASSSQSSQPASPMTSPSPTNVNLQGVNLTSLPNSINSLQNVQVSFPGLSQPITMSL
NVSQTTGGTVTPGVIVSLPISSATNTCTTVSSMVAATVVTTAIAGSTPTVVIANPANAHL
SLPIAQLIPSGVKGLSQQNIRSNNAVTLPQGAQAIQLIGSQRPRFNHMTRQVQSNQVKSA
VLSNQLVTVAKTVTASQLILSGNKQVLTPVMAATKPVLMASQTTPSSQVVPVNKQTLLTK
SLHARASTGQCSQQTQSLGVATLSQQQFQQLQQCLAAQHKVAVAAGSSQSRTQIEAQRNS
TSTPGEDPA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgattggtacagcctgtagtttggaagatgcgtgtcagcaggctcaggatatgattggt
ctagtatccagatgttggaagaatgcccaaggtcagaattcattggtcttaacatcagat
aagtcattatcctcccagaaaaaagaacagaatcactccaggcatagtatccaatccaaa
ctgaccaggctttattttgaagaactttctaaagttcctcatgcaactccagattcagtt
ttgaataatcttgagaatgagtgtgatcttttggggcggttagtgcaaagagaaagttta
aacacattaattgttaatctatatgctggtaataaaggatactcattagctgtaaggaat
agtgataaggggaatcaatatgataaaaattcattagctgagactcaacttatgggttac
gaacagggtgagctactttcgtgcatagataatggccaactgccagctatgctagctgaa
caactagaatgcagtttctctcatttattttacgatggctgtataattgccgaagttcga
gattatcggagatcatttcttcataacagagccgaaattcatcacgtacttcttaaacct
accacacagagcgtactttcggatgtatcgacactaacaagtgacggagattggagccat
gaggatcgattaatgttggaatcacatttagtggcagctactcaaggtcctttgtgcttg
gatccaaatcctattcctaccttagctagtacaagaattaagcaatctaaatcattgctt
accgatcatcaacttatgcgacaagctaaaaaattctctcaggtcactgtaaatcgaaaa
agaaaattagagcaattagcccagccagaaggacaaacaatacatgacttaatgttgaaa
ttccgtgcggaaagaagaggattagcgaccaatactgcctgtccaccgccttctcttaaa
attcctgagctgcctccacctaaacagaccgatgttttaaggttcgcgaaattatacgag
cgaccacgagaaacaaaagactgttcgccacaagttatagaagaatatatattagaaccc
gcagaaagtaaggattatataaagctttcgatcctacagaggcccgctacttccgagtac
ctaggagaactttatatggataagaatcgggatggagagagaaatggctcttcttgccgg
tttacattgggtaccagagctgtggctaatcattactatcaacaatttaaagaaatattt
acagaagagggtagaaaaaatgtgaaaataagacatattattccgggtcaaactcctcgt
atttcatgtacacctgccatgcaacgagcacatcaacaggcgcaacaagcaaaagcggcg
caattagcggctcaacagttgcaacaagttcaatctccgcatgtaacacaacagatttta
tcgcgagctcaaggacaactaactaatttggctagccaagtagcctcaatgaaagcgatg
accgaagctaccaccacctctgcacaaaataatcttacgtgcgtggattcagcaagcatg
cctcaagttattcaacataatgatattaccgcgttgagctcagggcaatctttggccaat
ggtggccttaacgcatcgacttctgcgcaaattgataactccgcgatgacggtagcggac
aatacttgcaacggttctggtattctggtctttcaaaaatcggctggtactattaataat
acagcatccgctaatgttccagtcttgcaagcgcaattacaagcgggaacacaaaactgc
ataagtgaacctgcaagtcagagccataatgagccaccgttcaagaaacattcgaacaat
ccggcaataaatgctcttgttaattccctcatgaactccgcacagcaattccaacaacaa
gctgcagctaatgctgcggctgcagctatgaataacaatgcacaagccacaaacaagtcc
aacaatactgcgattcttagtctattaaatagtactcctgcaaatatagctcaacgaaag
gttcaaccccaaaggatctctcttaacacttccatcccacctaaaattattagtcatggc
aatgtgatcaacgtgcccagcaccactggtcaagtacgcgtaagcttaaactcttccgcc
ttaacaggacaattgagttgcaagcaacagccagtgaaaacaaccactgtgagactcgcg
cgtgtccaagatccgacatcgactcttggtttatcgatgccgggactttcagctttactt
gccggcacgccgtcggctgataacccgatacctggaatgaattcgacttcatcattactt
gaacggctcaccgcttcttccagtcaaagcagtcagccagcgagtccgatgaccagccca
tcgccaaccaatgtgaatttacaaggcgtaaatctcactagtctaccgaattctatcaac
agtttacaaaatgttcaggtatcgtttccaggcttatcgcaacctattacgatgtcatta
aacgtatctcaaacaaccggcggcactgtcacacccggtgtcatcgtctcccttcctata
tcgtctgccacgaatacctgcacgacagtgtcaagcatggtggctgcaacagtcgttacg
acagctatcgctgggagtacgccgacagtagtgatcgctaatcctgccaatgctcattta
tctttaccaatcgcccaattaataccatctggagtaaaaggattgtcacagcaaaatatt
aggagtaataatgcagtgactcttccacagggggcacaagcaatccaacttattggatct
caaagaccgcgatttaatcatatgactcgtcaagtacaatcgaatcaagttaaatctgct
gttttatcgaatcaattggtaacagttgcgaaaacggtaacagcgagtcaattgatattg
tctggtaataaacaagtattaactcctgtaatggccgcaacgaaacctgtgcttatggca
tcgcaaacgacgccttcttcccaagtagtacctgttaataagcaaactcttttgacaaag
tctttgcatgctagggcttctaccggccaatgcagccaacaaacgcaaagtctcggggtg
gctactttatcccaacagcaatttcagcagttacaacaatgcctagctgcgcagcataaa
gtcgctgtcgcggcaggaagttctcaaagtaggacacaaattgaagctcagcgaaattct
acgtctaccccgggggaagaccccgcctga
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integrated database retrieval system
