Cardiocondyla obscurior: 139110714
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Entry
139110714 CDS
T10704
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
KO
K04638
intraflagellar transport protein 57
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cobs03037
]
139110714 (Ift57)
Cilium and associated proteins [BR:
cobs03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
139110714 (Ift57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
Baculo_PEP_C
CT398_CC
SPX
DUF1664
ANIS5_cation-bd
Laminin_II
Prominin
SecA_SW
Occludin_ELL
Exonuc_VII_L
Syntaxin_2
Lebercilin
Adeno_L433K_22K
ZapG-like
DUF7615
Motif
Other DBs
NCBI-GeneID:
139110714
NCBI-ProteinID:
XP_070526769
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All DBs
Position
LG21:74967..77598
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AA seq
404 aa
AA seq
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MFRDSQKIVVEDGLAPSAPYIINIRMEDLLEKLKLLNYDSEFVQELKMKPINRHHFVIPT
NPGEQFYAFTCLAAWLIRKAGKSFEIPQESDDPNSTIALILDYLREINIPVEFPPSKLKQ
GSGEHAVYVLDNLADNALKVTEFKWKRVSIPPDEPTPEPEIEEDDAELILEKVEEEMMAE
YDDDDDHDILHIDDITKLYGQNVSEMPKLDSILESTTNKEEWQLELEKVLPRLKVTIKTD
SRDWRAHLEQMKQLRSNIATNLSGTKSHLSKIYTDIGNALDKIKTRETYLNRQLDPSLME
YRSLQEELSKVKEQYRDVSGGVTERTRVLNKLMEELEHVKREMDERGSSMTDGTPLINIK
KTITKMKNEISEMNIRIGVLEYSLMCARVRDRTQLREDMNNTST
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgagacagtcaaaaaattgttgtggaggatgggcttgctccatcagcaccatat
attataaacattcgcatggaagatttgttggaaaaattaaagctcttaaattatgattca
gaatttgtacaagagctaaaaatgaaaccaatcaataggcaccactttgtaattccaacc
aatcctggggagcaattttatgcatttacttgcctagctgcatggctcattagaaaagca
gggaaaagttttgaaataccacaagaatcagatgatccaaattctactatagccctaatc
ttggattatctcagagagattaacatacctgtggaattcccgcctagtaagcttaagcag
ggcagtggggaacatgcggtttatgttttggacaatttagctgataatgctttaaaggtg
acggaattcaagtggaaaagagtaagtatcccacccgatgagcctactccagaaccagaa
attgaggaagacgacgcggagttaatcttggagaaagtagaagaagaaatgatggccgag
tacgacgacgacgatgatcacgatatcttacatatagatgacattacgaagctttatgga
caaaatgttagtgagatgccaaagttggatagcattttagaatcgacgactaataaagaa
gaatggcaattggaattagaaaaagtgttacctcgtttgaaagtgactattaaaacagat
tcgagagactggagagcacatctcgagcagatgaaacaattgcgatcgaatatcgcgacc
aatctaagcgggacgaaatctcacttgagcaaaatctacaccgatatcgggaatgctttg
gataaaatcaaaactagagaaacgtatcttaatagacaactcgatccgtctttaatggaa
taccgttcattgcaagaagaactatcaaaggttaaagagcagtatagagacgttagtggc
ggtgtgaccgaacgaacgcgcgttcttaataaattaatggaagagctggaacatgtgaaa
agagagatggacgagagaggatccagcatgacagacggcacgccgcttattaacataaag
aagacaatcacgaagatgaaaaacgagatctccgagatgaatattcggatcggcgtgctg
gaatacagtctaatgtgtgcacgggtacgggatcggacgcagctccgagaggacatgaac
aacacgagtacttga
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