Cardiocondyla obscurior: 139110780
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Entry
139110780 CDS
T10704
Name
(RefSeq) DDB1- and CUL4-associated factor 10 homolog
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cobs04121
]
139110780
Ubiquitin system [BR:
cobs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139110780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
139110780
NCBI-ProteinID:
XP_070526921
LinkDB
All DBs
Position
LG21:complement(152086..156687)
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AA seq
692 aa
AA seq
DB search
MPKIRIKQTPNSLWLRQRELGFKSSLGHSDDFHRTLYSSVQPITSWDHGDNLTAARHGGV
FNLEYSPDGSLLLAACEKKSILMFDPLCRKLIHAIDDAHNDCVNCVRFLDQRMFATCSDD
STVALWDARNLKQRIRTLQGHSNWVKNIEYSPSDSLLLTSGFDGSIYTWDINSFTENSFV
YNRVFHTNGLMRTRLTPDTSKMLICTTSGYLIIIHNLKLSTLSQDLAGFKPNMYRLMQLS
QTTIPVAASYTHLFAHTRTHNRVEFLTDFPIGDDAEVISSLQVHPQGWCALSRNVSSGEK
SEWTCIHDIQEREASSNVEQVNEGEEGRLTSLNVEEFEDFPQSQSSRSGMTSSFVIENGN
RTRIVHDVLDVRSNSFNSSIRMSADAAPSSIRPSRTSWQVTARRNLRSQSRSPRPDRNTG
RPHFDMVEVSSSTSTGSTDSRTNAIHDDDRPEDQHVDDNDNSAHDGSADEREYRSRHSQL
NEMRRRNMLDNFTSGNVELHVSTSDVWEALVAIREARVRRERERQNYSSNTESREWTTTS
NEAATVNLSRPPHTVVIIGDRNRMQSMQSRQNSQTMYAIPRNHKIHQNTPRLTHYIEEPN
VGSGYIKELCFSADGRLICSPFGYGVRLLAFSSNCSELSNCVPPANESVQLHELVTHIGH
SDIVVSTKFSPKHYLLVSGCLSGKIVWHQPVV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaataaggatcaagcagacaccgaatagtctctggttaagacaacgcgagctg
ggtttcaagtcctcattgggacacagtgacgactttcatagaactctatactcctccgta
cagcctatcacttcctgggatcatggagataatctgactgccgcgaggcatggtggtgtt
tttaatttggaatattccccagatgggtctcttttgctggcagcatgtgaaaagaagagt
attttaatgtttgatccattatgtaggaaattgatacacgcgatagatgatgctcacaat
gactgtgtcaattgcgtaaggtttctagatcaacgcatgtttgcaacttgctcagatgat
agtacagttgcactatgggatgccagaaatttgaagcaaaggataagaactcttcaggga
cattctaattgggttaaaaatatagaatacagtccaagcgatagcttattattgactagc
ggatttgacggtagcatatatacttgggatattaatagttttacagaaaatagctttgtg
tataatcgtgtttttcatacaaatggactaatgcgaacaagacttacacctgacactagt
aaaatgttaatatgtactacttcaggatatcttattataatacataatcttaaacttagt
acgctaagtcaagatttggcaggatttaagccaaatatgtacagactaatgcaattatct
caaactaccataccagtcgcagcgagttatacacacctatttgctcacactcgtactcat
aatagagtagaattccttactgattttcctataggcgacgacgctgaggtaatatctagc
ttacaagttcacccacaaggatggtgcgctttatctcgaaacgttagcagtggagagaaa
tcagagtggacttgcattcatgatatacaagaacgtgaggcatccagtaatgtggagcaa
gtgaatgaaggagaggaaggtcgtctaacaagtttaaacgtggaagaatttgaagacttt
cctcagtcgcaatcgtcacgttcgggaatgacgtcttccttcgtaatagaaaatgggaat
cgcacccggattgtacacgacgtgttagacgtaagatcaaattcgtttaattcgtctatt
cgtatgtccgcggatgctgcaccgtcgtcgatcagaccgtcgcggactagctggcaggta
acagcgcgcagaaatttgcgatctcaatcaaggagtccgcgcccggatagaaacacgggg
agaccacattttgacatggtcgaagtcagttcaagcacgagcaccggttctaccgactct
aggacaaatgcaattcacgacgacgacagaccggaggatcaacatgtagacgataacgat
aattcggcacacgatgggtcagccgatgagagggagtatagatctagacattctcagctt
aatgagatgcggcgacgtaatatgctcgacaatttcaccagtggcaacgtagaactacac
gtgagtacatctgacgtatgggaagcactcgtggcaattagagaagctagggtgcgaagg
gaacgggagaggcaaaattattccagtaatactgaaagtagagaatggacgactacatcg
aacgaagccgcgactgtgaatctttctcgacctcctcacacagtcgtgataattggcgac
cgtaaccggatgcaaagtatgcaaagtcggcaaaattcgcaaaccatgtacgcaataccg
agaaatcataaaattcatcaaaacacgcctagattaacgcattacattgaagagcccaat
gtcggttccggttatatcaaggaactgtgcttttcggcggacggtagattaatatgttca
ccattcggttatggagtacgattgctagcattctcgagcaattgctctgaattatctaat
tgcgttccacctgccaacgagtctgtgcaacttcatgaattagtgacacatatcggtcat
tccgatattgttgttagcacgaaattctcacctaagcactatctactcgtatccggttgt
ctgagcggtaagatcgtttggcatcaaccggtggtttag
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