Cardiocondyla obscurior: 139110927
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Entry
139110927 CDS
T10704
Symbol
Vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139110927 (Vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139110927 (Vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobs04147
]
139110927 (Vps28)
Membrane trafficking [BR:
cobs04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
139110927 (Vps28)
Exosome [BR:
cobs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139110927 (Vps28)
Exosomal proteins of other body fluids (saliva and urine)
139110927 (Vps28)
Exosomal proteins of colorectal cancer cells
139110927 (Vps28)
Exosomal proteins of bladder cancer cells
139110927 (Vps28)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
DAHL
SUKH_6
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
139110927
NCBI-ProteinID:
XP_070526997
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All DBs
Position
LG22:complement(3555078..3559903)
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AA seq
212 aa
AA seq
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MSITQDRPELYEEVKLYKNAREREKHDNQADLYAVVNTLQHLEKAYIRDCVTPKEYTAAC
SKLLVQYRAAFKQVQSDQFPTIDSFTRAFRLDCPAALERIKEDRPITIKDDKGNTSKCIA
DIVSLFITLMDKLRLEIKAMDQLHPDLRDLMDTMNRLSILPSDFDGKEKVAEWLQTLDNM
SASDELSDTQVRQLIFDLETSYNAFNKILHNS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattactcaagatcgaccggaattatacgaagaagttaagctctataagaacgcc
agggagagagagaagcatgacaaccaggcggatctttatgccgtggtaaatacgttgcaa
catttggaaaaggcttatatcagagattgcgtcacgccaaaagaatacacggcagcatgt
agcaaactattggtgcaatacagagcggcatttaagcaggtacaaagcgatcagtttcca
acaattgactcttttaccagagcattccgtttggattgccctgctgcactcgagagaatc
aaagaagacagacctatcacaattaaagacgacaaaggcaacacctccaaatgcatcgcc
gatatcgtttcgctgtttatcacgcttatggataaattgcgactggaaataaaagccatg
gatcaactgcacccggatctaagagatctcatggataccatgaatcgcctgagtatacta
ccgagtgactttgatggcaaagaaaaagttgccgagtggctgcagacgcttgataatatg
tccgcctctgacgaattgtcggatactcaagtcaggcagttaatatttgatttagaaacg
tcctataatgcttttaataagatactccataactcttaa
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