Cardiocondyla obscurior: 139110940
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Entry
139110940 CDS
T10704
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139110940
Transcription factors [BR:
cobs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139110940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
PE
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
139110940
NCBI-ProteinID:
XP_070527024
LinkDB
All DBs
AA seq
431 aa
AA seq
DB search
MKMNDVKPESSGASISPAGGNNNNNSINGNGKSSATAAAAAAAAAATVAANGGEGISAAV
AKVLQGYDWTLVPVATKGSGDKRAAHVKRPMNAFMVWAQAARRKLADQYPQLHNAELSKT
LGKLWRLLSDNDKKPFVEEADRLRVIHKREHPDYKYQPRRRKQNGPSSGRESSPTRNQSN
VTFSVTRSLKQEDMSPRGVQGPNSPQSGVSSSPPTTPGQGLSPPTPPTTPRGQHYINQNN
QLPQNNTVYYQELVNGTPSSESPHQQPAVDLRYIEVGDGLPGEENQLNGLGTLDGLGLNL
PVNFQECEIESNEFDQYLPPQTAPIHQYPPVQVTTASQWLLNRYEEEIERPIKRHCSEQA
IAEVSSWEDRTQEMVRYHELQPPLPPVQYISAHNAHHSHAGTQMGHSHVSTPYTQYAHRY
VSGIETWPNYM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaacgacgtcaagccggagagcagtggcgcgtctatttcgccggcgggcgga
aacaataataacaatagcatcaacggtaacggtaaatcgtcggcaaccgcggccgccgct
gccgctgcagctgcggcgacggtggccgctaacgggggtgaaggaatcagcgccgccgtt
gccaaggttctccaaggatacgactggaccctggtacccgttgctaccaagggctccggc
gacaaaagggcggcccacgtcaagaggcctatgaacgcgtttatggtgtgggcccaggct
gcgaggcgaaaactggccgatcagtatccgcagcttcacaacgccgagctgtcgaaaacg
ctgggaaagttatggcggcttctgtccgacaatgataagaaacccttcgtcgaggaggcc
gatcggctgcgcgttattcacaagcgcgagcatcccgactacaagtatcaaccccgacgt
cggaagcagaacggaccgtcctccggccgggaaagctcgccgacgagaaaccagagcaac
gtcacgttcagcgttaccagatccttgaagcaagaggacatgagtcctagaggcgttcag
gggccgaattcgccgcagagcggtgtgagttcttcgccgcccacgacacccggccaaggc
ctgtcaccgccaacacctcccacgacaccgaggggacagcactacatcaatcagaacaat
cagctaccgcagaacaacacggtgtactatcaagagttggtaaacggcacgccgtcgagc
gagtccccgcatcagcagccggcggtcgatctccggtacatcgaggtcggagacggcctc
cccggcgaggagaaccagctgaacggcctcggtactttggacgggctcggacttaatcta
ccggtgaacttccaagagtgcgagatcgagagcaacgagttcgaccagtacttaccgccg
cagaccgcgccgatacatcaatacccgcccgtgcaagtcaccaccgcctcgcaatggtta
ctcaacagatacgaagaggagatcgagagaccgatcaagcgtcactgttcggagcaggcg
atcgcggaggtgtcgtcgtgggaggacaggacacaggagatggtcaggtaccacgagctg
cagcctccccttccgccggtccagtacatatccgcccataacgcgcaccactcgcacgcg
ggtacgcagatgggtcattcgcacgtgtccacaccttacacgcaatacgcacatcgctac
gtctccggcatcgagacgtggccgaattacatgtag
DBGET
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