Cardiocondyla obscurior: 139111058
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Entry
139111058 CDS
T10704
Name
(RefSeq) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139111058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139111058
03009 Ribosome biogenesis [BR:
cobs03009
]
139111058
Messenger RNA biogenesis [BR:
cobs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
139111058
Ribosome biogenesis [BR:
cobs03009
]
Eukaryotic type
Pre-60S particles
RNases
139111058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF4901
Motif
Other DBs
NCBI-GeneID:
139111058
NCBI-ProteinID:
XP_070527249
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All DBs
Position
LG01:complement(3610797..3612874)
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AA seq
184 aa
AA seq
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MSSYHSNSHIVWIDMEMTGLDVNVHHILEIACIITDKKLNVVSNELNIVIHQSDTILENM
NDWCKVNHLKTGLIEESRSSKISLEEAEKMVLQLLKKHIPEKSCPLAGNSVYMDRFFLYK
YMPLVNEYLHYRIIDVSTIKEIARRWNVYVHNSLPRKKLNHRALDDIKESINEMKHYKKT
FFKF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttatcatagtaatagtcatattgtatggattgatatggagatgactggtctt
gatgtgaatgtacatcatatattagaaattgcctgtatcattactgataaaaaattaaat
gttgttagcaatgaattaaatattgtgatacatcaatctgacacaatattagaaaatatg
aatgattggtgtaaagtaaatcacttgaaaacgggattaattgaagaatctcgctcaagt
aaaatatcattggaagaggctgaaaagatggtacttcaacttttaaaaaaacatattcca
gaaaagtcatgtccactggctggaaattcagtgtacatggatcgtttttttctatacaaa
tatatgccactagttaacgagtacttgcactacagaattattgatgttagtacaattaag
gaaattgccagaagatggaatgtatacgtacataattcactaccaaggaaaaaactaaac
cacagagctttggatgatataaaagaaagtattaatgaaatgaaacattacaaaaaaacc
ttttttaaattctga
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