Cardiocondyla obscurior: 139111067
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Entry
139111067 CDS
T10704
Symbol
Isha
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cobs Cardiocondyla obscurior
Brite
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139111067 (Isha)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139111067 (Isha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139111067
NCBI-ProteinID:
XP_070527221
LinkDB
All DBs
Position
LG22:complement(1772997..1783896)
Genome browser
AA seq
1613 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQNTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPPEVIQPLFDLADPNHPIHKEQAVNSNGTLNASSGNNLSNVGAVTKTPPSAIKNAVK
DPKLFPSGKTIDPVWLAQTKMEAAVNANKLLNQSNSGQMDSTIFDQLQHLQQLLLKKDAT
NESKSSVKFDKKLLDFDYGEEEDDDVVVSSSPNTATSANAQHNAVSANSLESLGLLLANP
EVLRQLQTLQQTMQNNATSSQLEMEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFAAECEL
KPSDILKPSTQNYPPNMNSNVMQDMSQPPPGYPPALSYSSQSLSNIRQINQSTHQNQKSP
LLDERQETQDYSGNSIRRDSSSVEIVNCENTSSQSRSPDRYRHHSRSRSPRHRDRDRDRD
RKSRSRSRSRRRRSRSRDRGRDRKRDDSREKMTEEEREKDRERRKRGLPPIVRDKLSVCS
TTLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKLKNQK
LQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLTNITDQELELLEEGGMIDEDT
LPPHLKGKLKHPGTSADVLQQQLHLQQQAMVAAVNAGGAPIPTLTDGIVNVIQSSANSQQ
QQQQQQQLVDTSQPPPIRPPTSAALLPPPNTQLQMMPPAFTMPGVPRMISHMGLQMTHGL
MPNVPIGVPPPNMQSLLGPPGMMQTMLTPPVNPPFGAGVGVSLLTQIPLPAPAAPSDKPN
STAKLANNSQTGYEILNITGMPHNVPPIGVPPPTTETSMPNLPMLRQPYGVGPAPPMQMQ
LPQQQHHSDDMDVEMEDAMPQSLNSNLPKDKPNLSDQLIAAMNLSSGVNDCRLENDQSRE
YKERERDRENRERRDRGDRDRGDRIDINECRMDRGRDRGRGRDRGRDRRRDNRDGRDRER
DDRRDRDSRESRDNRGESTRHSEGSSVQNQNVPEGEGTAKKEGKPSLADRLRQLADGKLP
LDDRMDRNVRGTRTERSNERSDRNFEESPGSTAARRPPPGEMPISLMDLPKFGVIPPDRT
DFTRGPDFRPGLPDAREFPQRGLPPDRPDRQNFPPPRGGPRTSQMDDFLETRMQPGIFPE
DFENRLGHNGPPRPDEFPPGRLGPVRDEFERPEVRARRPPVDEYERERFEYEMRRDGFDP
RMQDGFDLRGHNERSDFDLRRRDFFGGPMDAPVFGMPPLMGPKGPRGPVGPDGFGPRGAR
GPGPLMFHLRGMGPRGMRPGMRPPFAPRGPPFDPREPDAFFRPPFDDMRGRPGPHIRSPF
GPMGPPAMHGPDGPWRNPEGNAPPPASWPGQESEGHGQRENNLSRDKQKSAKQQDFKNIS
ERENRNRNRKSRWGNVSPPTDEVDETPSEETENKVETSDGTEQEAKDNFDASSLEVDQQS
LLVQKEKDEPAIQEQDTMHGDRENEFATMLQDKGTDEISYQNEKVSTFEISADRFSSDNL
VLEQRNEEEQCEYQAPIPTEDSTKQNVVQSIEQIAHVSENYSEQSVEQQADSL
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgaaggcgttcaacgcggagctctcagctctctatgatgttaaaccccct
atctcaaaagccaaaatgaattcgcttacacgtggagccatcaaagcaataaaattttac
aagcatgttgtacaaagcgtggaaaaattcattcaaaaatgcaagccagagtacaaagta
ccaggattgtatgtaatagattcaattgttcgacaatcccgacatcagtttgggatggaa
aaagatgtgtttgctccacgatttgcaaaaaatatgcaaaatacatttcttaatctttta
aagtgtccacaagaggataaaagcaaagttatacgtgttttaaatctttggcaaaagaat
gcagtttttccaccagaagttattcaaccactatttgatctagctgatccaaatcatccg
atacataaagaacaggcagtaaatagcaatggtacattaaatgcgtcgtctggaaataat
ctaagtaatgtaggtgctgtcactaagactccaccctctgcaattaaaaatgctgtgaaa
gatcccaaactatttccttccggaaaaacaattgatccagtatggttagcacaaacaaaa
atggaagcagcagttaatgcaaataaacttttgaaccagtctaattccggtcagatggat
tctactattttcgaccagttacaacatttacaacaattacttttgaaaaaagatgctaca
aatgaatcgaagagttccgtcaagtttgataaaaaattgttagattttgattacggtgaa
gaagaagacgatgacgttgttgtttcgagttctccaaacactgctacttcagccaatgcc
cagcacaatgcagtttcagcgaacagcttagaaagtcttggattattgctagcaaatcct
gaggttttgcgacagttacaaactttacaacaaactatgcaaaacaatgcaacttcctcg
caacttgaaatggaagaaaagatgcgcaagctgcaacaaatgaaacagcaagaagaagaa
tttgataagcatttagcacaaactgttcctaatcttccatttgcagctgaatgcgagtta
aaaccttcagatattttaaaaccaagtacacaaaattatcctccaaacatgaatagtaat
gtgatgcaagatatgagccagccaccacctggttatccgccggctctatcatacagttca
caatctttatcaaatattagacaaattaatcagtccacgcatcaaaatcaaaagagtcct
ttacttgacgaacgtcaagaaacgcaagattattctggaaacagtatcagacgtgatagc
agcagtgtagaaattgtaaactgcgaaaacacaagttctcaaagtagatcaccggatcgg
tatcgacatcatagtcgatcccgatctccacgacatagagaccgagatagagatcgagat
agaaaatctcgatcaagaagcaggtcaagacgaaggagatctcgttcgagagatagaggt
cgtgatagaaaacgtgatgatagtcgagaaaagatgacggaagaagagcgagagaaagat
agagaacgacgtaaacgcggtttaccgccaatagttagagataaattaagtgtttgcagc
acaacactttgggtaggacatttatcaaaacttgtacatcaagaagaattatctgataca
tttggagagcttggcgacattgttagtattgatttaatatccccaagaggttgtgctttt
atatgtatgaatagaagacaagatgcatatcgagcattaacgaaattaaaaaatcaaaag
ctgcaaggcaaagctattacgttagcatgggcacccggtaaaggagtaaaaggcaaagaa
tggaaagactactgggaagtagagctaggtgttagttatattccgtggaataaattaacc
aacattacggatcaagaattagaattattagaagaaggaggaatgatagatgaagacaca
ttgccccctcatttaaaaggaaaactgaaacatcctggaacaagtgcggatgtcctgcaa
caacaattacatttgcagcaacaggccatggttgctgctgtaaatgctggtggtgctcct
attcctactttaacggatggtattgttaatgtcatccagtcgtcggctaattcacaacag
cagcagcagcagcaacaacaattagtcgacactagtcaacctccaccaattaggccaccg
acatcggctgcgttattacctcctccaaacacgcaattacaaatgatgccgccagcattt
acgatgccaggagttccacgaatgattagccacatgggcctacaaatgacacatggatta
atgccgaatgttccaattggagtaccaccacctaacatgcagagtttattaggaccaccc
ggcatgatgcagaccatgttgacacctccagtaaacccgccatttggtgcaggtgttggc
gtaagtttattgacgcaaattccactgcccgcacctgctgcgccttcggataaaccaaac
tccactgcaaagttggctaataacagccaaacaggatacgagatcctgaatattacaggt
atgccacacaatgttccaccaattggagtaccgccgcctacaacggagacgagtatgccg
aatttgccaatgctacggcaaccgtacggagtcggcccggcgccaccaatgcaaatgcaa
ctacctcaacaacagcaccactcagatgatatggacgtagaaatggaggatgccatgccg
caaagtttaaacagcaatctacccaaggacaagccgaatctcagtgatcaattgatcgcg
gcgatgaatttgagtagcggtgtaaacgactgtcgtttggagaacgatcagtctcgtgaa
tataaagaacgagaacgcgatcgtgagaatagggaaaggagagatagaggtgatcgagat
cgtggagatcgcattgatattaatgagtgcagaatggatcgtgggagagatagaggcagg
ggacgggatcgtggtcgagacagacgaagagacaatcgcgacggtcgcgacagagaaagg
gacgacagacgcgacagggacagccgtgaaagtcgagacaatcggggggaaagcaccaga
cactccgaaggatcaagtgtacaaaatcaaaacgttccggaaggcgagggcacagcaaaa
aaagaagggaagccgagtctagcagatcgattgcgacaattagcggacggtaaattacca
ttagatgatcggatggacagaaatgtacgtggtactcgaaccgaacgaagcaacgagcgg
agtgacaggaattttgaagaaagtcctggaagcacggcagcacgacggcctcctcctggt
gaaatgccaatatcgttgatggatctacctaaatttggagtaatccctccggatcggaca
gactttacacgaggaccagatttccggcccggactgccagacgcgcgcgagtttccgcag
cgcgggctaccgcccgatcgtcctgaccgacagaattttcctccaccgcgcggtggaccg
aggacttcacagatggacgactttctagagactaggatgcaacctgggatcttcccagag
gacttcgagaacagactaggccacaatgggcctccccggcctgacgagtttcctcctggc
aggctaggtccggttcgcgatgaattcgagcgacctgaagtgcgcgctcgcagaccaccc
gtggacgaatatgaacgcgagcgtttcgagtacgagatgaggcgcgacggatttgatcca
cgaatgcaagacggttttgatctcaggggtcataacgagcgctccgatttcgatcttcgc
agaagagactttttcggtggcccaatggatgcacctgtatttggaatgccacctttaatg
ggcccaaaaggaccgagaggaccagttggacctgatggatttggaccacgtggagccaga
ggacctggtccactgatgttccacttacgtggtatgggtccgagaggtatgaggcccggg
atgaggccaccgttcgcacctcgaggtccaccgttcgacccaagagaacccgatgctttc
ttccgaccaccatttgatgatatgcgcggtcgcccaggaccacacattcgatcaccgttt
ggtccgatgggtccaccagcgatgcatggacccgatggtccatggagaaatccagagggt
aatgccccaccacccgcatcgtggcctggacaggaatctgaggggcatggacaacgtgaa
aataatctttctcgggacaagcaaaaatcagcgaagcaacaggactttaaaaatatatcc
gagcgagagaatcgcaatcgaaacagaaaatctcgatggggtaatgttagtccgccgacg
gacgaagtggacgagacgccgtcagaggaaaccgaaaataaggtagagacatcagatggc
acggagcaggaggcaaaggataactttgacgcttcatccttggaggtcgatcaacagagt
cttctagtgcaaaaagaaaaagacgagccggcaattcaggaacaggatacgatgcatggt
gatagagaaaatgaatttgcaaccatgctgcaggataagggcaccgacgagattagctat
cagaatgaaaaggttagtaccttcgaaattagtgcggatcgtttctccagcgacaattta
gttctggagcagcgaaatgaagaagaacagtgtgaatatcaagcacccattccaactgaa
gattcaacgaaacaaaatgtggtacaatcgatcgaacaaatagcgcacgtcagtgaaaat
tatagtgaacaatctgtggaacagcaagcggattcgttataa
DBGET
integrated database retrieval system
