Cardiocondyla obscurior: 139111069
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Entry
139111069 CDS
T10704
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03440
Homologous recombination
cobs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139111069
03460 Fanconi anemia pathway
139111069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobs03032
]
139111069
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139111069
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139111069
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Topoisomerases
139111069
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139111069
FA (Fanconi anemia) pathway
139111069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
HVO_2753_ZBP
zf-CCHC_4
zf-CCHC
EF-hand_Zip
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
139111069
NCBI-ProteinID:
XP_070527227
LinkDB
All DBs
Position
LG22:complement(1721762..1726340)
Genome browser
AA seq
1074 aa
AA seq
DB search
MALLILHKALNYTIYCGLKSVKSKAPAGAFYLLRQYSKNVMKVLNVAEKPDAAKTIAGYL
SNGTSRRREGLSKYNKIFEFEMELWGQRCSMVMTSVSGHLLGYDFSGAYKQWQSCHPLSL
FDAPVSKQCLEENHIKIKNTLQREVRTCNVLIIWTDCDREGENIGFEIIDVCRSFKSSIR
IYRAKFSEITKQSIQRAVQSLQHPDKAMSDAVDVRSELDLRIGAAFTRFQTLRLQKVFPN
TLGDMLISYGSCQFPTLGFVVERFLAIERFKSEPYWKLKVIDDRDGMSVEFRWARVRLFE
KMPCQIFLDMCLEQPEATVEKVMSKPKSKWRPLPLDTIELEKQGSRKLHINAKEMMRIAE
RLYTQGLISYPRTETNIFPKELSLEPLVQQQTINRNWGNFAQNLLDSGITPRQGKKSDQA
HPPIHPIKYTDTLQGNEAKVYEFVVRHFLACLSKNAEGQETTVEINIAGEKFTANGLQII
AKNYLDVYIYEKWNNKYIHAYEERQVFRPTSIDMVEEKTSAPNLLTEAELIALMDKHGIG
TDATHADHIDTIKSRQYVGLTDTQHFLPGKLGIGLVMGYDNMGFQMSKPHLRSDLEKDLQ
LICQNQKDPNEVLQNQINKYRNVFKVAIERANLIDDSLAQYLDERPTQTEQAVIPQEVVI
FKCPKCGSNMVLKDKRQGGGKYISCMGYPSCSNVIWFSEAVINVEASNETCNRCTENIRK
LTFKLVRNIMPVYGTSYTTCIGCDTGFSEMLNINMDCVKRTGRANNIEHNNARNTWSSTS
TSNTSQSQSIQQQSSSNNTGSARNKNPSLLELTLTSGRPAINQRPNVSQSNNSNRLNTDR
DAITNNRENSSYINSYDSNSSSNRSDAPRNSSYVNNTWGNIDNNTEIMCNCHENAIQFTV
RKEGPNKGRLFFKCPKPQGTGCNFFLWASDSAEPQNNTTNEQSRISNLNRNNDSHSSRVG
TSNNNSRNPYTNDIMCNCNQPARKLTVHKGGPNIGRQFYGCPKGMNSTCNFFKWADEDND
NVDWDDSSARDRNNTTRKRTFQKGNAPKRPKLATKRKCRNCGMEGHTRNRCPEN
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctcatattacataaagctctgaattatacgatatattgcggcttaaaaagc
gtcaagagcaaggctcctgctggtgctttttatttattgaggcagtattcaaaaaacgtt
atgaaggtactcaatgttgctgagaagcctgatgcagctaaaactattgctggctacttg
tcaaatggtactagcagaaggagggaaggtttatcaaagtacaataagatctttgaattt
gaaatggaactgtggggtcaaagatgcagtatggtgatgacatctgtgtcaggccactta
ctaggctatgacttttcaggagcttataaacaatggcaaagctgccatccattgagctta
tttgatgctccagtatctaagcagtgcttggaagagaatcatataaagattaagaatact
ttacaacgtgaagtaaggacctgtaatgtattgatcatttggacagattgtgacagagaa
ggggagaacataggctttgaaattattgatgtttgccgctcattcaagtcttctattcgt
atatatagagcaaaattctcagaaattacaaaacaatctatccaaagagctgtacaaagt
ttacaacatccagataaggcaatgagtgatgctgtagatgtaagaagtgaattagattta
cgaattggtgctgcattcacgagatttcaaactttaagattgcaaaaggtatttcccaac
actcttggagatatgctcatcagttatggaagctgtcagtttccaacacttggatttgta
gttgagagatttttagctatcgaacgatttaagtccgaaccgtattggaagctaaaagtg
atcgacgatcgcgacggtatgtctgtagaattcagatgggctagggtaagattatttgag
aaaatgccttgccaaatttttttggacatgtgcctggaacagccggaagctacggtggag
aaagtaatgtccaaaccgaaaagcaaatggcgacctttacctctggacactatcgaattg
gagaagcaaggttcgcgcaagttgcacataaacgcgaaggaaatgatgagaatagcagaa
agattgtatactcaaggtttaattagttatccacgtacagaaacaaatatattcccgaaa
gaattgagtttggagcctttagtacagcagcaaacaatcaatcggaattggggtaatttt
gcgcaaaatttattagattctggaataactcccaggcaaggaaaaaaaagtgatcaagcg
catcctcctattcatcctataaaatatactgacactttacaaggaaatgaggcaaaggtc
tatgaatttgtggtccgacattttctcgcttgcttatcgaagaatgcggaaggccaagaa
acaacggtggaaattaatatagcaggagaaaaattcacggctaatggtctccaaattata
gcaaagaattatctcgacgtgtatatatacgagaaatggaacaacaaatatattcacgct
tacgaggagagacaagttttccgaccgacgagcatcgatatggtagaagaaaaaacttcc
gcgccaaatttattaaccgaggccgagttgattgcactaatggataagcatggtatcggt
acagacgctactcacgccgatcatatcgatactattaaatccaggcaatatgtgggatta
acggatacccagcatttcttgccgggaaaattgggaattggcttagtcatgggctatgat
aacatgggtttccaaatgtccaagccacatttgcgttcagatttagaaaaagatttacaa
ctgatatgccaaaatcagaaagatccgaatgaagtgttacaaaatcaaattaataaatat
cgtaatgtatttaaagtggcgatagaacgcgctaatttgatagacgattctttagcacaa
tatcttgacgagagacctactcaaaccgaacaagcagttattcctcaagaagttgttata
tttaaatgtccaaagtgcggttctaacatggttttaaaagacaagcgccaaggtggagga
aaatacatctcttgtatgggatatccatcgtgtagcaacgtaatctggttctcagaagct
gtaattaacgtggaagcttcgaatgaaacatgcaatcggtgtacagaaaacatacgtaaa
ttaacatttaaattagtcagaaatattatgcccgtgtatggtacttcttacacaacatgt
ataggctgtgatactggattcagcgaaatgttaaacattaacatggactgcgtcaaacga
actggaagagcgaataatatcgagcacaataatgcaaggaatacatggagctcgacttct
acctcaaatacatctcaatcgcaaagtattcaacaacagtcatcttctaataatacagga
tctgctcgaaataagaatcctagcttgctcgaactcaccttaacatctggaagacctgca
ataaatcaacgtcctaatgtctctcaatcgaataattcaaataggctgaatactgataga
gacgcaattacgaataatagagaaaattcttcctatattaattcgtatgattccaacagt
tcatcgaacagatcagacgcgcccagaaattctagctacgtaaataatacatggggtaat
attgacaataatactgagattatgtgtaattgtcacgaaaatgcaatccaatttacggtg
agaaaagagggaccaaataaaggacgtttattttttaagtgccctaaaccgcaaggtacc
ggatgcaatttttttctgtgggcatctgacagcgccgaacctcaaaataatacaacgaat
gaacaatcaaggatatctaatctgaatagaaataatgatagccactcctctcgcgttggt
acctcgaacaataattcgagaaacccgtatacaaacgatattatgtgtaattgtaatcag
ccagctcgaaagttaacggtgcataagggtggtcctaatataggacgacaattttatggg
tgtcctaaaggtatgaactctacctgtaatttctttaaatgggcggatgaagataacgac
aacgtagattgggatgactcctctgcaagagatagaaataatacaacgagaaaaagaacc
tttcaaaaaggtaatgctccaaaacgacccaaacttgcaaccaagagaaaatgtagaaac
tgtggaatggaaggtcacacaaggaacagatgtccagaaaattga
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integrated database retrieval system
