Cardiocondyla obscurior: 139111085
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Entry
139111085 CDS
T10704
Name
(RefSeq) nuclear pore complex protein DDB_G0274915
KO
K18716
nucleoporin NUP42
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139111085
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139111085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
139111085
NCBI-ProteinID:
XP_070527258
LinkDB
All DBs
Position
LG02:10042178..10155125
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AA seq
650 aa
AA seq
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MVICKYYRQGNCRYGQYCQFEHVNHFGNTKNEDDIIIVVAKEVLLAERGGQWLLSCFAPL
KDRPCITDMKDLSPEEVRWEMYQAQKNGMVEQAKLHFQQLCQDMKAKREMLKNPTRETIA
ELKKLLGSGQKSGLNAANNTGGKSLFNAIYLQQSPLSFTTPQVNNTSTNNVFGSTVFGVQ
NNPFGGGRYASSNNAMSIFGKSNNNTTSVFGGAATFGNSLGGFSTPTSNAGSIFGTNGSS
TSFSSVQNNALNFGTPQNNPVFGGTSQNVFAQNNVFGATPQLGNVPTGSLFNNSITSQAN
TPLFSAPTTTVSSSFGGSSSGLQTNSVFGVSTTSSSGSFNGGIFTQSKAQIPAFEASVFG
GVTPPNYTNNSAGNSIFGGGQTFGTPAIFTNSNIFGGSTAAATSVFGVTAATTTPAFGTP
VVATTTPAFGASVATTAPAFNLSQQSNNTTDKNTNSTMSVGTMPFGTPSIPISSPFISNN
PQQFDSTSTNSAPFAGTGFGTAVASTNNTFGTTETSSNLIFANAGTTFATSNETVPNSTP
FPAFSNINTSSSPFSSTASTTPTVTTANPFAPRMQPQGGPPFGNIMQNQSNVNTSPFEKS
PFNTTAANTIIDDTVYSLDGTLTDDEKNMFLSEKFIFGKIPLKSPTKDIR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggttatctgcaaatattatcggcaaggcaattgccgttatgggcaatactgtcaattt
gagcacgtaaatcattttggcaatacaaaaaatgaagatgatatcattattgtggtggcc
aaggaagtactccttgccgaacgcggtggacagtggttgctatcatgctttgcaccactc
aaagaccgtccctgtatcacagatatgaaagatttatccccagaagaagttcgatgggag
atgtatcaagcacagaaaaatggcatggttgaacaagcaaaactacattttcaacaatta
tgccaagacatgaaggcaaaaagagagatgttaaaaaatcctacgcgagaaacaatcgca
gaactgaaaaaactattaggaagtggtcaaaaaagtgggttgaatgctgcaaacaacacg
ggcggaaaatcactttttaacgctatctacttacagcaatctcctttatcttttacaacc
ccacaagtgaataacacgtcaactaataatgtatttggaagcacagtgtttggtgtacaa
aataatccattcggcggaggcagatatgcatcctcaaataacgcaatgtcgatatttgga
aaatccaataacaatacaacgtctgtatttggcggtgcagcaacgtttggaaatagtctt
ggaggatttagtaccccgacgagtaatgctggctcaatttttggaacaaatggatcgtcg
acatcgttcagtagtgtacagaacaacgcactaaactttggcacgccacaaaataatcca
gtctttggcggaacgtctcaaaacgtgtttgcccaaaacaatgtatttggtgcgacacct
caactgggcaacgtgcccaccggatcacttttcaataattcgataacttcgcaagcgaac
actccattgtttagtgcaccaacaaccactgtctctagctcgttcggtggttcatcgagt
ggattacagacaaattcagtattcggtgtctcaaccacatcgtcgtctggctcttttaac
ggcgggatatttactcagtctaaagcacaaatacctgcgtttgaagcgtcagttttcgga
ggagtaactccgcctaactacactaataattctgctggtaactcaatattcggcggcggt
caaacgttcggcactcccgcaatattcacgaatagtaatatattcggcggatctacggcc
gccgcgacgtcagtttttggtgtgaccgctgccaccacaacgccggctttcggtacacct
gttgttgccactacgacaccagctttcggtgcctccgtcgctaccacggcgccggctttt
aatttgagtcaacagtctaacaatactaccgataagaacaccaattccaccatgtcggta
ggaactatgccgtttggtacgccatccattccaatcagcagtccattcatttccaataat
ccacaacaatttgattctacaagtacgaactctgctccgtttgccggtacgggatttggc
acggctgttgcgagtacaaataacacatttggtacaacagaaacatcttccaatttaata
tttgcaaacgcaggaactacatttgcaactagtaacgagaccgttccaaattcgacgcct
ttccctgcatttagcaatattaatacttcctcctctccattcagttctaccgctagcaca
actcctacggtaacgactgcaaatccatttgcaccgcggatgcaaccgcaaggcggtcca
ccatttggaaacattatgcaaaatcaatctaacgtcaacacttctccttttgaaaaatca
ccgtttaatactactgcagccaacactattatcgatgacactgtatacagtttagatggt
acattaacagacgatgagaagaatatgtttttgtctgaaaaatttattttcggcaaaata
ccactcaaatctcctactaaagatataaggtaa
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