Cardiocondyla obscurior: 139111108
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Entry
139111108 CDS
T10704
Name
(RefSeq) transcriptional regulator ATRX homolog
KO
K10779
transcriptional regulator ATRX
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139111108
03036 Chromosome and associated proteins [BR:
cobs03036
]
139111108
Transcription factors [BR:
cobs03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
139111108
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139111108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
139111108
NCBI-ProteinID:
XP_070527321
LinkDB
All DBs
Position
LG22:943769..955253
Genome browser
AA seq
2010 aa
AA seq
DB search
MDIVPKKRSLKINKRILPSQRQQILKFKQMQKSLVVLCDKEDGNNSAETSFVSTRNKQQI
DKSVKRINSDSESDESGTNKALSTSKKTSKNTSLRNVKTNNRNVKSKNKIESFCNSTSES
EDEKCDEQDRKKNRVMSHNNNDQQKSRKSSKRLQLSDTPLDNSDNSSSKEFQTIKLQKVR
RNRYSKRQLADLEIDHTKSPIVKNSKNNYSEKHIDEQSNFTFNELIDISKDCKKICSDFQ
MHFETIEQLYSKKDKEQFALKFTEAMTKLMTKLEQKQKKLPISNKKKNSVANNVSSDDEE
SSEKCEKRMTDENKSSNKRYENKAVSECDSDEIFSANEMEKLENEIPVTQRKPDKSRIEN
SVNNDGSDTDSEDRTSMQDKSKSTSDLDIQDDLTSSPVLSVPKEKKTSIERLNKKKLFSN
SMKTKIEASPGRNHCKTLEDIEGNQSNIETVIDESMDLFDTSLEDTQENKQEVEEEEENL
SNQDKQKRIESPIIKNKSTKKSQNTNINKHKSLDEEEILAKEALLATDSDVSDIIPLEEN
VAKLTENFVANNTNPIKKQNKNVNDSNSINDETELKNDNDQLKKNCKKISSLDENAEIER
ASKKALLESNSDDSTSSSELELEKPSDKKSESGSSTKNIKAKLSLLASSSESSSSEITVS
EMANVSPNMKRIHQSDSDINSTDSKVKKKKLDLSKNIYYKKDKKLRMFCKVHVTRLNAND
LKRYLHALNTSRKYLEHKQLESLINLDNLEKKHKKSTKESSDSLTDDDSSSNILTNPNKR
KEKPKDKVESLMDHLEKIENGNISTIINTDSDNESNHSISKIDDPLISNEALISEANEIA
KENLLNSSDENEVMANSDDNSDDQDKIENKKKSEKKSEEKSEEKTLEQDNNKKDKSDWRQ
DKILTMKLSSDTDSEAEKKFDKKQEKIANKLKENNTDSDNKEKPVRSKKKKVGRRIIDSD
SDNKITDLDSDNDGKSSSANQSSSDLESDLKKKRDKRKKRKSDNSHSSDTSSVTEIKSKP
KRKRIKKMASDSDSSDVEELKNSQESSFGKGRKNIRKVLKDKQVAEDTKQAAKEEEERLK
RIAERQAVYNEMYEVRLAGEEKVEKLVLDFDPETKKELVTVHPELVKCLKPHQAQGIKFM
WDACFESLERAKNTSGSGCIIAHCMGLGKTLQVITLTHTLLTHEEINIKTVLIVCPLSTV
LNWRNEYNTWLKDLDDFEVYELTKFKKNFERKWQLQRWRKTGGVMIIGYEMFRNLSGPKK
NMRKGIKEVIIECLVDPGADLIVCDEGHLLKNEDTALSKSMRNVKTRRRIVLTGTPLQNN
LTEYHCMVQFVKPNLLGTKKEFLNRFVNPITNGQFDDSTAYDVKLMKKRAHVLHKMLEGS
VQRFDYSVLTPFLPPKQEYVIFVRLTDAQIKMYHYYLANLAKRLFCQRGTLFPDFQALQR
IWTHPVVVRLNAEKLERANEKKELSESEGSLKDFINDDSSDVETITSSSNSNSDSDVQEI
DDKNDKPSVSKRKTRNNPGDEEESPSPTGATESEWWLQFVQPEDYDDLRASSKLLILFGI
LKESEQIGDKVLVFSQSLYSLSLIEDFLKRIDDQTQNGEPCETLDNHTGSWSLGLDYFRL
DGQTSPENRNIWCKIFNRPTNTRARLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQ
SIFRIFRFGQKKPCYVYRLLAAGTMEEKIYNRQVTKLSLSCRVVDEQQIERHYSNQNLNE
LYTFEGYNDKDKPTLNLPKDRLLAEIFLKYKDVVESYHEHDSLLENKAEEELDEEERKQA
WLEYEEEKKGKPMINPMANMVYQNNMYLQQQMMMNTMQPNMMAPLQLDVDNLQHYIRQDY
PNATPEQQKIMANKVIMDMYNYWEKQATLYPSTVTAPRSQVSNFQQNPQVSTSSNLHQSA
SQLNQLLLTKPNYMNVNKTVQPSGVQMGDVVLNTFAKNLPVINDTSKNTTTDQDIQIIPT
TSNTGVTRQSGISSAQVTPQPIDKSKMQEE
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggatattgttcctaaaaagagaagcctcaagattaataaacgtatattaccatctcaa
agacaacaaatattgaaatttaaacaaatgcaaaaatctctggtagtgttgtgtgataaa
gaagacggtaataattctgctgaaacctcatttgtttctacaagaaacaagcaacaaata
gacaagagtgtaaagcgcattaattctgatagcgaaagtgatgaaagcggcacaaataag
gcgttgagcacatccaagaagacttcaaaaaatacctcattacgaaatgtaaaaacgaat
aatcgtaacgtaaagtcaaaaaataaaatagaatcgttttgtaactcgactagtgaatca
gaagatgaaaaatgcgacgaacaagatagaaagaaaaatcgggtaatgtcacacaataat
aacgatcaacaaaaaagccgtaaatcctcgaagagattacagctttctgatacaccgcta
gataattcagataatagttcgagtaaagaatttcaaacgataaaacttcaaaaagtacgt
cgcaatagatactcaaagaggcagttggcagacttagaaatagatcatactaagtcgccc
atcgtgaaaaactctaaaaacaattatagcgaaaaacatattgacgaacaatccaatttc
acttttaatgaattaatagatatttcaaaagactgcaagaaaatatgttcagactttcaa
atgcatttcgaaacaatagagcagttgtacagcaaaaaagataaagagcaatttgcacta
aaatttacagaagcaatgactaagttgatgactaagttggagcaaaagcaaaaaaaatta
cctatttctaacaagaaaaaaaattctgttgcaaataatgtaagtagcgatgatgaagaa
tcttcagaaaaatgtgaaaagcgtatgacggatgagaataaatccagtaacaagcgatat
gaaaataaggccgtgtctgaatgcgatagcgatgaaatattttcagcaaacgaaatggaa
aaattagaaaatgaaataccagtaacccaacgcaaaccagataaatccagaatagaaaat
agtgtaaataacgatggaagtgacaccgatagcgaagatagaacatcaatgcaagataag
tcgaaaagtacgagtgatttggatatacaagatgatttgacttcttcccctgtattaagt
gttccaaaagaaaaaaagactagcatagaacgattaaataaaaagaaattattttcaaac
tcaatgaaaactaaaattgaagcatctcctggaagaaatcactgcaagacattagaagat
attgaaggcaatcaatcgaatatagaaactgtaattgatgagtcaatggatttgtttgat
acatctttagaggatacacaagagaataaacaagaagtagaagaagaagaggaaaattta
tcaaatcaagataagcaaaaaagaatagaatctccaattataaaaaataagtctacgaaa
aaatctcagaacacgaacattaataagcataaatctcttgatgaagaagagatattagca
aaagaagctctgctggcaactgattctgatgtgtctgacataataccgctcgaagaaaac
gtagctaaactaactgaaaattttgttgcaaataatactaatccaattaaaaagcaaaac
aaaaacgtcaacgattctaatagtatcaatgacgaaactgaactgaaaaatgataatgat
caattaaaaaagaactgtaaaaaaataagctctttagatgagaatgccgaaatagaaaga
gcctccaaaaaagctcttttggaatcaaattcagacgattcaacatcttcttcggagtta
gagttggagaaaccttcggacaaaaagtctgaatcaggttcttctacaaaaaatatcaaa
gcgaaattatcactcctggcatcttctagtgaatcttccagttctgaaataaccgtgtcc
gaaatggcaaatgtctctccgaacatgaaacgtattcatcagtctgacagtgatataaat
tctacagattccaaagtaaagaagaagaaacttgatctaagtaaaaatatttactacaaa
aaagataaaaaattaagaatgttctgcaaagttcacgtaacgcgattaaatgcaaacgat
cttaagcgatatttacatgcgttaaatacgtcaagaaaatatttggaacataagcaactt
gaaagccttatcaacctggataatcttgaaaagaaacacaagaaaagtacaaaggaaagt
tctgattcattgacggatgatgattcgtcctcaaatattttaacaaaccctaataagcga
aaggaaaagccgaaagacaaagtggaatctttgatggatcacttagagaaaatagagaat
ggcaatatctcgacaattataaatactgattctgataatgaatcaaatcattcaataagt
aaaatagacgacccgcttatatctaatgaagctctaatatcagaggcaaatgaaattgcg
aaagaaaatctattaaactcatctgatgaaaacgaagtaatggcgaatagcgatgataat
agtgacgatcaagataaaatagaaaataaaaagaagtccgaaaagaagtctgaagaaaaa
tctgaagaaaaaactttagaacaagataataacaagaaagataaaagcgattggagacaa
gacaaaatattgacaatgaaattgtcctctgacaccgattccgaggctgagaaaaagttc
gataaaaaacaagaaaagattgccaataaattgaaagaaaataacaccgattctgacaat
aaagaaaaaccggtaagatctaagaagaaaaaggtcgggcgaagaattatagattcagat
tcagataacaaaataacagatttggattccgataatgatggtaaatcttcaagtgccaat
caaagttcaagcgatttagagtctgatttaaaaaagaaaagggataaacggaagaaacgc
aaatccgataatagtcactcgtcagacacaagttcagtcaccgaaataaagtcaaaaccg
aaacgaaagcggatcaagaaaatggcatctgacagtgatagcagtgatgtggaggaattg
aaaaattcacaagagtcttcattcggtaaaggtcggaagaatatacgaaaagttttgaag
gataaacaagtagcggaagatacgaaacaagccgctaaggaagaagaagagagacttaaa
cgtatcgctgaacgtcaagctgtgtacaacgagatgtatgaagtgagactcgctggcgaa
gaaaaagtagagaagctcgttttagactttgatccggaaacgaagaaagaacttgttact
gtgcacccagaattggtcaaatgtttaaaaccacatcaagcacaaggcattaaatttatg
tgggatgcttgtttcgagtctctagaaagagcgaaaaatacatctggatctggatgtata
atcgcacattgcatgggcttgggtaagacgttacaggtgatcactctaacgcacacgctt
cttactcacgaagagattaatattaagacggtactgatagtttgtccgctaagcacggta
cttaattggcgaaatgagtacaatacgtggctaaaagatttggatgattttgaagtgtac
gaattgacaaaatttaaaaagaattttgaaaggaaatggcaattgcaaagatggcgaaaa
actggcggtgtgatgattattggctatgaaatgttccgtaatcttagcggtccgaaaaaa
aatatgcgaaaaggcataaaagaagtaataatagaatgtttggttgatccgggcgctgat
cttattgtctgtgacgaaggccatttattaaagaatgaagataccgcgttaagtaaaagc
atgagaaacgtaaaaacgcggagacgcatagtgcttactggaacaccattacagaataat
ttaacagaatatcactgcatggtgcagtttgtgaaaccaaatctgttaggtacgaagaaa
gaatttttaaacagatttgtaaatcctataacaaatggtcaatttgatgattctactgct
tacgacgttaaattaatgaaaaaacgtgcacatgtcttacacaaaatgttagaagggagt
gtacagaggtttgattattctgtgcttacaccttttttaccgccgaaacaagaatatgtt
atttttgttaggctaacagatgcacaaattaaaatgtatcattattacctggcaaatctt
gctaagcgtcttttttgtcaaaggggaactctctttccggattttcaagcgttacaaagg
atttggacacatcctgtagtcgtccgtctaaacgcagaaaaattagaaagagcgaatgag
aaaaaggaacttagtgaatcggagggttcattaaaagattttatcaatgacgatagttcc
gatgtagaaactatcaccagtagtagcaattcaaatagtgacagtgacgttcaagagatc
gatgataaaaacgataagccaagcgtttctaaacgtaaaacaagaaataatcctggtgat
gaggaagaaagcccctcacctacaggtgcaacagaatcagagtggtggttgcagtttgtg
caacccgaagactatgatgatttacgagcgtcttctaaattgttaatcctctttggaatt
ctaaaagaaagtgaacaaattggcgataaagtgctcgtattctcacaatctttgtattct
ctctctttaattgaggattttctaaaaagaatagacgaccaaactcagaacggtgaaccc
tgtgagactctcgataatcatactggcagttggtctttaggactcgattattttcgactt
gacggtcaaacttcgcctgagaatcgaaacatatggtgtaaaatatttaacagacccact
aacacgagagcgagattgttcctcatatccacacgcgctggaggactaggaattaattta
actgcagcaaacagagtgattatattcgacgccagttggaatccttctcacgacgtacaa
agtatatttcggatattcaggtttggacaaaaaaaaccgtgctacgtatatcgattactt
gccgcgggaacaatggaggaaaaaatttacaatcgccaagttacgaaactttcgctttcg
tgtcgcgttgtggacgagcaacagattgaacgtcattatagtaatcaaaatctcaatgag
ttgtacacattcgaaggatataacgataaagacaagcctacgttaaatttaccgaaagat
agactgctggcggagatatttctcaagtacaaggatgtcgtggaaagttatcacgaacat
gattctttattggagaacaaggctgaagaagaattggatgaagaagaacgtaagcaagcc
tggttagaatatgaagaggaaaagaaaggaaaaccgatgataaatccaatggcgaatatg
gtttatcaaaataatatgtatctgcaacaacaaatgatgatgaataccatgcaacctaac
atgatggctcctttgcaattagacgttgataatcttcaacactatattcggcaagattat
cctaatgcgacaccagagcagcagaaaataatggctaataaagtcataatggatatgtat
aattattgggaaaagcaagctacattatatccttccacagttacagcgccaagatcgcaa
gtttcaaattttcaacaaaatccacaagtttcaaccagtagcaatttacaccaatcagcc
tcacagttgaatcaattgcttttgacgaaaccgaattatatgaacgtaaataaaactgtg
caaccaagcggtgtgcaaatgggagacgtagttctaaatacatttgcgaaaaatcttcca
gtaattaacgatacaagcaaaaatacgactacggaccaagacatacagataattcctacg
acaagtaatacaggtgtaacgcgccagagtggaatcagtagcgcacaagtaaccccacaa
ccaatcgataaaagtaaaatgcaagaggagtaa
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