Cardiocondyla obscurior: 139111470
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Entry
139111470 CDS
T10704
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs00900
Terpenoid backbone biosynthesis
cobs01100
Metabolic pathways
Module
cobs_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
139111470
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cobs01006
]
139111470
Enzymes [BR:
cobs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
139111470
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
139111470
Prenyltransferases [BR:
cobs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
139111470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
TilS-like
Motif
Other DBs
NCBI-GeneID:
139111470
NCBI-ProteinID:
XP_070527873
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All DBs
Position
LG24:1612537..1617550
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AA seq
406 aa
AA seq
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MSLIAKNRFLSVFNVARRFAAVTSNHAHVAHMGVRRGNAACWRSLDRNVRTVHSVTQPTW
ATSKDESREIMAVWPDVVRDLTDAVKSFNIPDVTKWMAKVLQYNVPGGKKTRALTLVYAY
KLLAPSHELTEENIRLIRILAWSVELMQAFFILIDDIQDRSLIRRGQPCWYLYNNLDLAA
INDGFMLESSVFYIIQKHFKGKACYIDLVETFQNIIMKTVMGQCLDLISTNFGKKPNLDL
FTMNRYNSIVEYKTAHYSFLLPVTAAMQVAGIKDPEMYRQAKTILLEMGHLYQVQDDYLA
CFGDSKVFGKDNTDIMEGKCTWLVVVALQRATSEQRKILEECYGVNDPEKVERVKQLFID
LGLPSTYSIYEEETYNLLNVHIQQISRGLPHSLFLNLLGKLYRRVT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgatcgcaaagaaccggtttctgtcggtatttaacgtcgcgagacgtttcgcc
gctgtcaccagtaaccacgcgcacgtcgcacacatgggtgtgcgccgcgggaatgcggca
tgctggagatcactggatcggaatgtacgaacagttcattctgtaacgcaaccgacatgg
gcaacaagcaaagacgagagccgggaaataatggctgtgtggccggatgtagttcgcgat
cttactgatgcagttaagagttttaatattcctgatgttaccaaatggatggcaaaggta
ttacaatacaatgtcccaggaggaaaaaagactcgtgctttaacgttggtctatgcctat
aaactgttggccccgagtcatgaactcacggaagaaaacattcgtctaattcgaatttta
gcatggagtgtggaactgatgcaagcttttttcatcctgatcgacgacatacaggaccga
tcgttaatccgtcgtggacaaccatgttggtatctttacaataacttggacttagcggca
atcaatgatggttttatgttagagagctctgtattttatataattcaaaaacacttcaaa
ggaaaagcctgttacattgatctagtggaaacattccagaatataataatgaaaacagtt
atgggccaatgcttagatttaatctctacaaatttcggtaagaagccaaacctggatctg
ttcacgatgaaccgatacaattctattgtcgaatacaaaacagcacattattcgtttctt
ttgccggtaaccgcggcaatgcaagtagctggaataaaagatccagagatgtacagacaa
gcgaaaactatcttgttagaaatgggacatttgtatcaagttcaagatgattatttagct
tgctttggtgattccaaagtttttggcaaagataatactgatatcatggaagggaaatgc
acgtggctggttgtcgtggctcttcaacgcgccacttcggagcagcgtaaaattttagag
gaatgttacggagttaatgatccagagaaagtagaacgtgttaaacaacttttcatagat
ttaggtctgccatctacttattcaatatacgaagaagaaacgtataatctattaaatgta
catatacaacaaatatcacggggccttccacatagtcttttcttgaatttattagggaag
ctttatcgcagagtgacataa
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