Cardiocondyla obscurior: 139111663
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Entry
139111663 CDS
T10704
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139111663
Transcription factors [BR:
cobs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139111663
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
139111663
NCBI-ProteinID:
XP_070528224
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Position
LG24:complement(2636177..2655208)
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AA seq
393 aa
AA seq
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MRAGGNMCDGSFSETLRGIQGMTGTSPPVSVSHMGVGLAGGSSLGSASKKMQVEHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEH
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMASGMGQAAMGSYYTPAAAYGSLS
AASMAAAAAAAAQQSAAMSGLAAPAQVVGSMDAMKYSMEADKYRAAYMPPSTLAMSMYPD
PKYLDSSNPKTYLDRTYLDAKAYMVQSFEQSKLYMDQKSTIEYNRPSYEPNKLYEESSPS
SVVGGSGPARSPPAESPDTSKQHERTEQGSSSASSTSTSSAASPGAPLSAYYPGSVQASG
LLGPQMGQYTPAAAYQMPPASGNDSFRRPLVIL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggctccttctcggaaactctccgcggtattcaa
gggatgacgggtacgtcgccaccggttagtgtcagtcacatgggggttgggctcgcaggg
ggtagctcgctcggttcagcaagcaagaaaatgcaggtggaacacattaaacggccaatg
aacgctttcatggtttggtcacgattacaacggcggaaaattgcgcaagagaatccgaag
atgcataacagcgaaatttccaaaaggctcggcgcagaatggaagctccttacggaggac
gagaaacgcccgttcatcgaccaggcgaaaaggttacgcgcgcaacacatgaaagaacat
cccgattataagtacagaccgcgaaggaaacctaagactctgcgaaaggagggctaccct
tacagtattccgtatccaagtgtccccatggatgcacttcgagcgggaatggccagtggc
atgggacaggcagcgatggggtcctattacacccccgccgcggcttacggctcactctca
gcggctagcatggccgcggccgcagcagcggctgcacaacaatcagctgccatgtctggt
ctcgcggcacctgctcaagtcgtgggttcgatggacgctatgaagtactctatggaggcc
gacaaatatcgcgccgcttatatgccgcccagcactctggcaatgagtatgtacccggat
cctaagtacctggattcttccaaccccaagacctacctggaccgcacctacttggacgcg
aaggcgtacatggtccagagcttcgagcagtcgaagctgtacatggatcaaaagtcgacg
atcgaatacaaccgacccagctacgagcccaataaactctacgaggaatccagcccgagt
agcgtcgtcggcggaagcgggccggcgagatcaccgcctgcggagtctccggacacgagc
aagcaacacgagaggacggagcagggctcgtccagcgcgagttcgacgtcgacgtcgtcg
gccgcgagtcccggcgcacctttgtcggcgtattatcccggatcggtacaagccagcggc
ttgctgggcccgcagatgggccagtacacgcccgccgccgcgtaccaaatgccaccggca
tcaggaaacgattcctttcgacggccgttggtaatcttgtga
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