Cardiocondyla obscurior: 139111851
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Entry
139111851 CDS
T10704
Symbol
Kz
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobs03009
]
139111851 (Kz)
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139111851 (Kz)
Ribosome biogenesis [BR:
cobs03009
]
Eukaryotic type
90S particles
Helicases
139111851 (Kz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
ResIII
ATPase
Flavi_DEAD
Helicase_RecD
AAA_30
HA2_N
AAA_23
AAA_16
DUF4746
Motif
Other DBs
NCBI-GeneID:
139111851
NCBI-ProteinID:
XP_070528508
LinkDB
All DBs
Position
LG25:1481472..1488315
Genome browser
AA seq
1191 aa
AA seq
DB search
MGKKGYNWKSRAVANVEVDNSTTKKILLDIEHRVENYDGCNAFVLPAEKRKTKNINKKEI
TSRILSKKRRKQLEKVIERKKKKLQRATLLEDLAKVQASSTELQQYVSLTSVQNKGLKRH
FRELETPNKFEKLKRKENIEEESDIINSSVNSIKMSKKKRQAILDSVRQDQTKLDPNVVG
FESSDSSTEGDSNNEEENETSGLDNTVGLDITISKKAEIIEKDIEKNLAKDVKEKTILTE
SEQSKKSVEEVQQQNVVHTPKIHTPVVFIPVNRKPEIQAVRLKLPVVAEEQVIVETINEN
PIVIITGETGSGKTTQVPQFLYEAGYAQNKMIGITEPRRVAAMSMSKRVAEELNLPEQEV
SYLIRFEGNATEKTKIKFMTDGVLLKEIQSDFLLTKYSVIILDEAHERSVYTDILIGLLS
RIIPLRNKRGNPLKLIIMSATLAVKEFVENTKLFKVQPPIIEVKARQFPVKIHFNRRTSK
DYVDEALRKAIKIHTRLPEGGILIFLTGQQEVHTVVRKLRKSFPLKKNKPQVKVVKNFDK
NETLEASDKEHSEKDDSDDDFDAEEALRRNKQRQKKQIVLPTINLDDYAVQITDDTHEDL
INVQSDEENLDEDEDEDEDVIDFKGLTNAQPLWVLPLYSLLPGDKQAKVFDPPPEGCRLC
VVSTNVAETSLTIPNIRYVVDSGRCKIRMYDKVTGVSTYHISYASKAAATQRAGRAGRTR
PGHCYRLYSSAVYDNDFEEHSQSEIQRKPVDDLLLQMKAMNIDKVINFPFPTPPDVIQLK
SAEKRLTILEALEPPSRKFEETYCAKVTSLGRSIAAFPVSPRYGKMLALSHQFNLSKYTI
CMVAALSVQEVLIETVDMEGSTKNKWLQMRRYWAGTGNSLLLGDLMVLLRAIGTAEYAGS
KGRLLSFCAENGLRHKAVVEIRKLRQQLTNEINLNVPNLNLMIDPKMPLPTDMEAKLLRQ
IVLAGMADQVARKVSPDEVKEDQDKAKWKHAYRTPEMEEPVFMHSSCVLRKTSPEWVVYQ
EIYETNKMYMRGVTAIEAEWLPKFAPTLCHLSEPLIDPPPRYNQGTGKIICRVSGTFGKV
GWTLPSMDIEHPLSVDGIKWFAYFFLEGQVCPKLKRFVPSLLTTPGSITKSWAKLIPRIQ
AIVQTLQSQGVMSKEKLMEMWGLDKKFLLPAYQKWLPESAHAEVAKLWPPL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaggttataattggaaatcaagagctgttgcaaatgtagaggttgataat
tccaccactaaaaagattttattagacattgagcaccgtgttgaaaattatgatggttgc
aatgcattcgtcttgcctgctgaaaaaagaaaaacaaaaaatataaataagaaggagata
actagtcggatattatcaaaaaaacgtaggaaacaactagaaaaagtaatagaacgaaaa
aagaagaaattacagagagcaacattgttagaagatctagcaaaagtacaagcatcttct
actgagctgcaacaatatgtaagcttaacatctgtacaaaataagggtttaaagcgtcat
tttcgagagcttgaaactcctaataaatttgaaaaattaaaacgtaaagaaaatattgaa
gaagaaagtgatataataaattcctctgtaaattctattaaaatgagtaagaagaaaaga
caagctattttggacagtgtaagacaggatcaaacaaaacttgatccaaatgtagttgga
tttgaatctagtgatagtagtacagaaggtgacagtaataatgaagaagaaaatgaaaca
agtggccttgataatactgttggtttggatattacaataagtaaaaaagccgaaataatt
gaaaaggacattgaaaaaaatcttgcaaaagatgtaaaagaaaaaacaattttaactgaa
tctgagcaatctaaaaaatcagtagaagaagtccaacaacaaaatgttgttcatacgcct
aaaatccatacgcctgtcgtctttatacctgtaaataggaaacctgaaatacaagcagtc
agattaaaattacccgttgttgcagaagaacaagttatcgtcgaaacaataaatgagaat
ccaatagtcataattactggagaaacgggaagtggaaagacaacccaagtgcctcaattt
ttatatgaggctggatatgcacaaaataaaatgatcggaataaccgaaccaagaagagtg
gcagcgatgtcgatgagtaaacgtgtagctgaagagttaaatcttcctgaacaggaagtt
tcatatttaattcgttttgagggaaatgctacagagaaaacaaaaatcaagtttatgacc
gatggtgttttattaaaagaaattcaaagcgattttctattaacaaaatattccgtaatt
atactcgatgaagcgcacgaacgtagtgtgtatactgatattttgatcggtttattatct
aggattattccgcttcgtaacaaacgcggcaatcctttgaagctaataattatgtcggct
acgttagctgtgaaagaatttgtagagaatacaaaattatttaaagtacaaccaccgata
attgaggtcaaagcgcgacagtttcctgtaaaaatacattttaatagaagaacaagtaaa
gattatgttgatgaagcattacgaaaagcaataaaaatacatacccgtcttccagaaggc
ggcatcctaatatttttaacaggtcaacaagaagtgcataccgttgtacgtaaattacgt
aaatcgtttccattgaagaaaaataaacctcaagtcaaagtggtgaaaaatttcgacaaa
aatgaaactttagaagcatcagataaagaacacagcgaaaaagacgactccgatgatgat
ttcgatgccgaagaagcattacgtcgtaataaacagagacaaaaaaagcagattgtactt
ccaactattaatctcgatgattatgcagtgcaaattactgatgatacgcacgaagattta
attaatgtacagagtgacgaggaaaatttggatgaggacgaagatgaagacgaagatgtt
attgatttcaagggattaacgaacgcgcaaccgttatgggttttacctctttattctctt
ttacctggagacaaacaagctaaagtatttgacccaccgcctgaaggatgccgcttgtgt
gtagtatcaactaatgttgcggaaacttcactgacgattcccaacattagatacgttgta
gatagcgggcgttgtaaaatcagaatgtatgacaaggtgacaggcgtaagcacatatcac
attagctatgcaagtaaagcagcggccactcaacgtgccggcagagctggtagaactcga
cccggtcattgctacagattatactcttcggctgtttacgacaacgattttgaagaacac
agccagtcggagattcaaagaaaaccagtagacgatttgttgctgcaaatgaaagcgatg
aatatagacaaagttataaactttccgtttcccacaccaccggatgtcatacaattgaaa
tccgcggagaaacggcttacgatactcgaagcattagaaccaccttcgagaaaatttgaa
gaaacatactgcgcaaaagtgacttcgcttggacgcagtatcgccgcgtttccggtttct
cctcgctatggtaagatgttggcattatcgcatcaatttaacttgtcaaaatacacgata
tgcatggtagcggctctcagtgtacaagaagttctgatagaaacagtcgacatggagggt
tcaactaagaataaatggttgcaaatgcgtcgttactgggctggaactggcaatagtttg
cttctcggtgatttaatggttttgttaagagccatcggcactgctgaatatgcaggatcg
aaaggaagactattatctttctgtgcggaaaatggcttaaggcacaaagccgtggtcgaa
atcagaaaactcaggcaacaacttaccaatgagatcaatttaaatgtaccgaatttaaat
ttaatgattgatccaaaaatgccattaccaaccgatatggaagcaaaattattgcgtcag
atagtccttgcaggtatggcggatcaagttgcgagaaaagtttcgcccgatgaagtaaaa
gaggatcaagataaggccaagtggaaacatgcttacagaactccagaaatggaggaacca
gtatttatgcattcctcgtgtgtcctacgaaaaaccagtcctgaatgggtggtttatcag
gagatatatgaaacgaataaaatgtatatgagaggtgtaacagcgatagaagctgaatgg
ttaccgaaatttgcgcctacattgtgtcatctcagcgaaccattgattgatccaccgcca
agatataatcaaggaacaggaaagattatttgtcgcgtgtctggaacatttggaaaagta
ggatggacactaccatcgatggacatagaacatccgttgtcagtggacggcatcaaatgg
tttgcgtatttcttcttggagggtcaagtgtgcccaaaactaaaacgatttgttccatcg
ttgttgacgacacccggtagcatcaccaagtcgtgggccaaattaataccacgtattcaa
gcaatagtacaaacgttacaatcgcaaggagtcatgtccaaagaaaaactaatggaaatg
tggggcttagacaaaaaatttttgttaccagcctaccaaaagtggctaccggaatctgcg
catgcagaagtagcaaaactatggccgcctttgtaa
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