Cardiocondyla obscurior: 139111940
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Entry
139111940 CDS
T10704
Name
(RefSeq) regulator of gene activity protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139111940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139111940
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139111940
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139111940
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
139111940
NCBI-ProteinID:
XP_070528697
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Position
LG26:742876..746768
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AA seq
461 aa
AA seq
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MANLNFEQPPRSIANASLTSRAASGGGGLNAAALTGHVTPTSGMFSGSSASTLSTANSAI
VATNVYPGASGSGGGQNSHQQQQQLSPMGSRGLFGQRAFTDRRTMPALGASNPMGSMGSF
GIPPSRNYGSQGAVNNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGSNMSGDKNIPVGLGPEIGQD
VLQANRAPGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGIVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYAKLESRPHLPSNFHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttgaactttgaacagccaccacgcagtattgcgaacgccagtctcacttcg
cgtgcagctagcggtggggggggtttgaacgctgcggctctcacgggccatgtcacgcct
acgtcgggcatgttctcaggctcgtccgcaagcactttgagtacagcaaactcggcgata
gttgctactaacgtttatcccggagcatcgggctctggtggtggacaaaatagtcatcag
caacaacagcaactctctcctatgggcagtagaggactgtttgggcagagagcttttacc
gatagacgtacgatgcctgctcttggagcttcgaatccaatgggtagtatgggcagtttt
ggaatacctccaagtcgcaattacggatctcaaggtgcggttaacaatttccactctgtt
ttcgggagtggaggcggtggagatacgagtactccacctttattagatctctcggagttt
ccctctctaacaaatagaggtcaaggtgattctatgccgcaacctagtcccatgccaggg
aaacaaccttatgttggaatggtaaagcaaccaacatcagaatcgagcgaatttacaatg
agctcggaagattttccagcattgccgggaacacaaaatcgagaaggtccatcacctggt
agcaacatgtccggtgacaaaaatattcctgtaggactcggtccagaaatcggacaagac
gtactacaagccaacagagcacctggatctgaaaagtctcaatcttctaaaagaggcatc
caaacatcacccgatggtaaagtgacaaatatacctgcgagcatggtgaaagatcaattc
ggtatggttggacttctaacgtttatcagagcggcggaaacagatccaaacttagtgtcg
ctggcgttaggccaagatcttactgcgttaggactgaatttgaattcgccagaaaatctt
tatcagaattttggtggtccttgggcggaaactccatgtcgaccacaggatatagatttt
cacgtaccaccggaatatcttataaatgccgcaatcagggataagctagcgccagttaaa
ctaaatcgatataaggatgatctactgttttatatgttttatacaaatgttggggatgta
ttgcaattagctgctgcagcggaactgtatagcagagagtggcgatatcatatggaagaa
aaagtttggataacgcaagcaccaggtttgggaattgtagaaaagacgtcgacatatgaa
cgtggtacttattattattttgatgcgcaaaactggagaaaggtagctaaggaattccat
ttggattatgcaaaactagaaagtagacctcatcttccttcaaactttcaccaaactcag
ccttga
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