Cardiocondyla obscurior: 139112537
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Entry
139112537 CDS
T10704
Symbol
Snr1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03082
ATP-dependent chromatin remodeling
cobs03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
cobs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139112537 (Snr1)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139112537 (Snr1)
SWI/SNF complex
139112537 (Snr1)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139112537 (Snr1)
PBAF complex
139112537 (Snr1)
SWI/SNF complex
139112537 (Snr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139112537
NCBI-ProteinID:
XP_070529696
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Position
LG29:complement(866098..868265)
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AA seq
369 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKSKKSMAWVPSL
PNSSHLDAVPQATPINRNRVHNKKVRTFPLCFDDTDPSANLENAAQQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETILED
QCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcgtacttacggagacaagcccataagtttccaagtagaagaaaatggagaa
tactactgcattggatcagaagttggcaattacttgcgtctttttcgtggatctttgtac
aaaagatatcctggcatgtttagaagatctataaccaatgacgaacgtaagaaattagtg
gaacttgggctgagtcagcatgttctggcatctagtgtttctctgttgagagccagtgaa
gtagaagatattatcgagggcaatgatgataaatacaaagctgtatctgttcactcgact
gaaccaccagcacctagagaaggtaaatctaaaaaatcaatggcatgggtaccaagcctg
ccaaatagttcacatctggatgcggttcctcaagctaccccaataaatcgcaatcgagta
cacaataaaaaagttaggacatttccattatgtttcgacgatacagatccatcagcaaac
ctagagaatgctgcacaacaagaaatgcttgttccaatacgtttagatatggaaattgaa
ggtcagaaattaagagacacttttacttggaataaaaatgaaagtctcataacacccgaa
caatttgccgaagtcctgtgcgacgatttggacctgaatccattaacttttgttcctgca
attgcacaggcaataagacagcaaattgaagcattccctcaagaaacaattttggaagat
caatgtgatcagagagtaataattaaattaaatatacacgtgggcaatacttctctagta
gatcaagtagaatgggacatgtctgaaaaggagaataatccagaaaagtttgccatgaag
ctttgcgcggagcttggtcttggcggagaatttgtcactgctattgcttatagtgtgcga
gggcaattatcttggcatcaaagaacatatgcattttctgaagcacctttaccaaccgta
gaagttcccttcagacctccgtcagaggccgatcaatgggcaccattcttagaaacctta
acagacgcagaaatggaaaagaagatacgcgatcaagatcgaaatactcgacgtatgcga
cgtttagcaaatacaacgcctggctggtag
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